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Fragments of gD Protein as Inhibitors of BTLA/HVEM Complex Formation - Design, Synthesis, and Cellular Studies.
- Published in:
- International Journal of Molecular Sciences, 2020, v. 21, n. 22, p. 8876, doi. 10.3390/ijms21228876
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- Article
Structural Characterization of Covalently Stabilized Human Cystatin C Oligomers.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 16, p. 5860, doi. 10.3390/ijms21165860
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- Article
Disulfide-Linked Peptides for Blocking BTLA/HVEM Binding.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 2, p. 1, doi. 10.3390/ijms21020636
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- Article
UNRES server for physics-based coarse-grained simulations and prediction of protein structure, dynamics and thermodynamics.
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- Nucleic Acids Research, 2018, v. 46, n. W1, p. W304, doi. 10.1093/nar/gky328
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- Article
Coarse-grained modeling of the calcium, sodium, magnesium and potassium cations interacting with proteins.
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- Journal of Molecular Modeling, 2022, v. 28, n. 7, p. 1, doi. 10.1007/s00894-022-05154-3
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- Article
Extension of coarse-grained UNRES force field to treat carbon nanotubes.
- Published in:
- Journal of Molecular Modeling, 2018, v. 24, n. 5, p. 1, doi. 10.1007/s00894-018-3656-1
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- Article
Studies of conformational changes of an arginine-binding protein from Thermotoga maritima in the presence and absence of ligand via molecular dynamics simulations with the coarse-grained UNRES force field.
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- Journal of Molecular Modeling, 2015, v. 21, n. 3, p. 1, doi. 10.1007/s00894-015-2609-1
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- Publication type:
- Article
A unified coarse-grained model of biological macromolecules based on mean-field multipole-multipole interactions.
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- Journal of Molecular Modeling, 2014, v. 20, n. 8, p. 1, doi. 10.1007/s00894-014-2306-5
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- Publication type:
- Article
UNRES-GPU for physics-based coarse-grained simulations of protein systems at biological time- and size-scales.
- Published in:
- Bioinformatics, 2023, v. 39, n. 6, p. 1, doi. 10.1093/bioinformatics/btad391
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- Article
WeFold: A coopetition for protein structure prediction.
- Published in:
- Proteins, 2014, v. 82, n. 9, p. 1850, doi. 10.1002/prot.24538
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- Publication type:
- Article
Theory and Practice of Coarse-Grained Molecular Dynamics of Biologically Important Systems.
- Published in:
- Biomolecules (2218-273X), 2021, v. 11, n. 9, p. 1347, doi. 10.3390/biom11091347
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- Publication type:
- Article
Integrating Explicit and Implicit Fullerene Models into UNRES Force Field for Protein Interaction Studies.
- Published in:
- Molecules, 2024, v. 29, n. 9, p. 1919, doi. 10.3390/molecules29091919
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- Publication type:
- Article
Theoretical Investigation of the Coronavirus SARS-CoV-2 (COVID-19) Infection Mechanism and Selectivity.
- Published in:
- Molecules, 2022, v. 27, n. 7, p. 2080, doi. 10.3390/molecules27072080
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- Publication type:
- Article
Inhibitory activity of double-sequence analogues of trypsin inhibitor SFTI-1 from sunflower seeds: an example of peptide splicing.
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- FEBS Journal, 2010, v. 277, n. 10, p. 2351, doi. 10.1111/j.1742-4658.2010.07650.x
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- Publication type:
- Article
Long‐time scale simulations of virus‐like particles from three human‐norovirus strains.
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- Journal of Computational Chemistry, 2023, v. 44, n. 16, p. 1470, doi. 10.1002/jcc.27087
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- Publication type:
- Article
Optimization of parallel implementation of UNRES package for coarse‐grained simulations to treat large proteins.
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- Journal of Computational Chemistry, 2023, v. 44, n. 4, p. 602, doi. 10.1002/jcc.27026
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- Article
Mitochondrial potassium channels: A novel calcitriol target.
- Published in:
- 2022
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- Publication type:
- Letter
Assessment of chemical‐crosslink‐assisted protein structure modeling in CASP13.
- Published in:
- 2020
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- Publication type:
- Correction Notice
Assessment of chemical‐crosslink‐assisted protein structure modeling in CASP13.
- Published in:
- Proteins, 2019, v. 87, n. 12, p. 1283, doi. 10.1002/prot.25816
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- Publication type:
- Article
Molecular dynamics insights into protein‐glycosaminoglycan systems from microsecond‐scale simulations.
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- Biopolymers, 2019, v. 110, n. 7, p. N.PAG, doi. 10.1002/bip.23252
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- Publication type:
- Article
Fluorescent analogs of trypsin inhibitor SFTI-1 isolated from sunflower seeds-synthesis and applications.
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- Biopolymers, 2014, v. 102, n. 1, p. 124, doi. 10.1002/bip.22442
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- Publication type:
- Article
Performance of protein-structure predictions with the physics-based UNRES force field in CASP11.
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- Bioinformatics, 2016, v. 32, n. 21, p. 3270, doi. 10.1093/bioinformatics/btw404
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- Publication type:
- Article
A new protein nucleic‐acid coarse‐grained force field based on the UNRES and NARES‐2P force fields.
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- Journal of Computational Chemistry, 2018, v. 39, n. 28, p. 2360, doi. 10.1002/jcc.25571
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- Publication type:
- Article
Introduction of steered molecular dynamics into UNRES coarse-grained simulations package.
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- Journal of Computational Chemistry, 2017, v. 38, n. 8, p. 553, doi. 10.1002/jcc.24685
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- Publication type:
- Article
Introduction of periodic boundary conditions into UNRES force field.
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- Journal of Computational Chemistry, 2015, v. 36, n. 12, p. 940, doi. 10.1002/jcc.23864
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- Publication type:
- Article