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Somatic whole genome dynamics of precancer in Barrett's esophagus reveals features associated with disease progression.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29767-7
By:
- Paulson, Thomas G.;
- Galipeau, Patricia C.;
- Oman, Kenji M.;
- Sanchez, Carissa A.;
- Kuhner, Mary K.;
- Smith, Lucian P.;
- Hadi, Kevin;
- Shah, Minita;
- Arora, Kanika;
- Shelton, Jennifer;
- Johnson, Molly;
- Corvelo, Andre;
- Maley, Carlo C.;
- Yao, Xiaotong;
- Sanghvi, Rashesh;
- Venturini, Elisa;
- Emde, Anne-Katrin;
- Hubert, Benjamin;
- Imielinski, Marcin;
- Robine, Nicolas
Publication type:
Article
Somatic variant analysis of linked-reads sequencing data with Lancet.
Published in:
Bioinformatics, 2021, v. 37, n. 13, p. 1918, doi. 10.1093/bioinformatics/btaa888
By:
- Musunuri, Rajeeva;
- Arora, Kanika;
- Corvelo, André;
- Shah, Minita;
- Shelton, Jennifer;
- Zody, Michael C;
- Narzisi, Giuseppe
Publication type:
Article
Novel Conserved Genotypes Correspond to Antibiotic Resistance Phenotypes of <i>E. coli</i> Clinical Isolates.
Published in:
PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0065961
By:
- Swick, Michelle C.;
- Evangelista, Michael A.;
- Bodine, Truston J.;
- Easton-Marks, Jeremy R.;
- Barth, Patrick;
- Shah, Minita J.;
- Bormann Chung, Christina A.;
- Stanley, Sarah;
- McLaughlin, Stephen F.;
- Lee, Clarence C.;
- Sheth, Vrunda;
- Doan, Quynh;
- Hamill, Richard J.;
- Steffen, David;
- Becnel, Lauren B.;
- Sucgang, Richard;
- Zechiedrich, Lynn
Publication type:
Article
Deep whole-genome sequencing of 3 cancer cell lines on 2 sequencing platforms.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-55636-3
By:
- Arora, Kanika;
- Shah, Minita;
- Johnson, Molly;
- Sanghvi, Rashesh;
- Shelton, Jennifer;
- Nagulapalli, Kshithija;
- Oschwald, Dayna M.;
- Zody, Michael C.;
- Germer, Soren;
- Jobanputra, Vaidehi;
- Carter, Jade;
- Robine, Nicolas
Publication type:
Article
Sequencing and curation strategies for identifying candidate glioblastoma treatments.
Published in:
BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0500-0
By:
- Frank, Mayu O.;
- Koyama, Takahiko;
- Rhrissorrakrai, Kahn;
- Robine, Nicolas;
- Utro, Filippo;
- Emde, Anne-Katrin;
- Chen, Bo-Juen;
- Arora, Kanika;
- Shah, Minita;
- Geiger, Heather;
- Felice, Vanessa;
- Dikoglu, Esra;
- Rahman, Sadia;
- Fang, Alice;
- Vacic, Vladimir;
- Bergmann, Ewa A.;
- Vogel, Julia L. Moore;
- Reeves, Catherine;
- Khaira, Depinder;
- Calabro, Anthony
Publication type:
Article
A Comprehensive Assay for CFTR Mutational Analysis Using Next-Generation Sequencing.
Published in:
Clinical Chemistry, 2013, v. 59, n. 10, p. 1481, doi. 10.1373/clinchem.2013.206466
By:
- Tayoun, Ahmad N. Abou;
- Tunkey, Christopher D.;
- Pugh, Trevor J.;
- Ross, Tristen;
- Shah, Minita;
- Lee, Clarence C.;
- Harkins, Timothy T.;
- Wells, Wendy A.;
- Tafe, Laura J.;
- Amos, Christopher I.;
- Tsongalis, Gregory J.
Publication type:
Article
Correction to: Sequencing and curation strategies for identifying candidate glioblastoma treatments.
Published in:
2019
By:
- Frank, Mayu O.;
- Koyama, Takahiko;
- Rhrissorrakrai, Kahn;
- Robine, Nicolas;
- Utro, Filippo;
- Emde, Anne-Katrin;
- Chen, Bo-Juen;
- Arora, Kanika;
- Shah, Minita;
- Geiger, Heather;
- Felice, Vanessa;
- Dikoglu, Esra;
- Rahman, Sadia;
- Fang, Xiaolan;
- Vacic, Vladimir;
- Bergmann, Ewa A.;
- Moore Vogel, Julia L.;
- Reeves, Catherine;
- Khaira, Depinder;
- Calabro, Anthony
Publication type:
Correction Notice
Author Correction: Evolution of structural rearrangements in prostate cancer intracranial metastases.
Published in:
2023
By:
- Khani, Francesca;
- Hooper, William F.;
- Wang, Xiaofei;
- Chu, Timothy R.;
- Shah, Minita;
- Winterkorn, Lara;
- Sigouros, Michael;
- Conteduca, Vincenza;
- Pisapia, David;
- Wobker, Sara;
- Walker, Sydney;
- Graff, Julie N.;
- Robinson, Brian;
- Mosquera, Juan Miguel;
- Sboner, Andrea;
- Elemento, Olivier;
- Robine, Nicolas;
- Beltran, Himisha
Publication type:
Correction Notice
Evolution of structural rearrangements in prostate cancer intracranial metastases.
Published in:
NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00435-3
By:
- Khani, Francesca;
- Hooper, William F.;
- Wang, Xiaofei;
- Chu, Timothy R.;
- Shah, Minita;
- Winterkorn, Lara;
- Sigouros, Michael;
- Conteduca, Vincenza;
- Pisapia, David;
- Wobker, Sara;
- Walker, Sydney;
- Graff, Julie N.;
- Robinson, Brian;
- Mosquera, Juan Miguel;
- Sboner, Andrea;
- Elemento, Olivier;
- Robine, Nicolas;
- Beltran, Himisha
Publication type:
Article
Genome-wide somatic variant calling using localized colored de Bruijn graphs.
Published in:
Communications Biology, 2018, v. 1, n. 1, p. N.PAG, doi. 10.1038/s42003-018-0023-9
By:
- Narzisi, Giuseppe;
- Corvelo, André;
- Arora, Kanika;
- Bergmann, Ewa A.;
- Shah, Minita;
- Musunuri, Rajeeva;
- Emde, Anne-Katrin;
- Robine, Nicolas;
- Vacic, Vladimir;
- Zody, Michael C.
Publication type:
Article
The Possibility of De Novo Assembly of the Genome and Population Genomics of the Mangrove Rivulus, Kryptolebias marmoratus.
Published in:
Integrative & Comparative Biology, 2012, v. 52, n. 6, p. 737, doi. 10.1093/icb/ics094
By:
- Kelley, Joanna L.;
- Yee, Muh-Ching;
- Lee, Clarence;
- Levandowsky, Elizabeth;
- Shah, Minita;
- Harkins, Timothy;
- Earley, Ryan L.;
- Bustamante, Carlos D.
Publication type:
Article

Found: 11