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Biostimulation induces syntrophic interactions that impact C, S and N cycling in a sediment microbial community.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 4, p. 800, doi. 10.1038/ismej.2012.148
By:
- Handley, Kim M;
- VerBerkmoes, Nathan C;
- Steefel, Carl I;
- Williams, Kenneth H;
- Sharon, Itai;
- Miller, Christopher S;
- Frischkorn, Kyle R;
- Chourey, Karuna;
- Thomas, Brian C;
- Shah, Manesh B;
- Long, Philip E;
- Hettich, Robert L;
- Banfield, Jillian F
Publication type:
Article
Sustainable syntrophic growth of Dehalococcoides ethenogenes strain 195 with Desulfovibrio vulgaris Hildenborough and Methanobacterium congolense: global transcriptomic and proteomic analyses.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 2, p. 410, doi. 10.1038/ismej.2011.111
By:
- Men, Yujie;
- Feil, Helene;
- VerBerkmoes, Nathan C;
- Shah, Manesh B;
- Johnson, David R;
- Lee, Patrick K H;
- West, Kimberlee A;
- Zinder, Stephen H;
- Andersen, Gary L;
- Alvarez-Cohen, Lisa
Publication type:
Article
Posttranslational modification and sequence variation of redox-active proteins correlate with biofilm life cycle in natural microbial communities.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 11, p. 1398, doi. 10.1038/ismej.2010.64
By:
- Singer, Steven W.;
- Erickson, Brian K.;
- VerBerkmoes, Nathan C.;
- Hwang, Mona;
- Shah, Manesh B.;
- Hettich, Robert L.;
- Banfield, Jillian F.;
- Thelen, Michael P.
Publication type:
Article
Potentially adaptive SARS-CoV-2 mutations discovered with novel spatiotemporal and explainable AI models.
Published in:
Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02191-0
By:
- Garvin, Michael R.;
- T. Prates, Erica;
- Pavicic, Mirko;
- Jones, Piet;
- Amos, B. Kirtley;
- Geiger, Armin;
- Shah, Manesh B.;
- Streich, Jared;
- Felipe Machado Gazolla, Joao Gabriel;
- Kainer, David;
- Cliff, Ashley;
- Romero, Jonathon;
- Keith, Nathan;
- Brown, James B.;
- Jacobson, Daniel
Publication type:
Article
Improved growth rate in Clostridium thermocellum hydrogenase mutant via perturbed sulfur metabolism.
Published in:
Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-016-0684-x
By:
- Biswas, Ranjita;
- Wilson, Charlotte M.;
- Giannone, Richard J.;
- Klingeman, Dawn M.;
- Rydzak, Thomas;
- Shah, Manesh B.;
- Hettich, Robert L.;
- Brown, Steven D.;
- Guss, Adam M.
Publication type:
Article
Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria.
Published in:
2007
By:
- Lo, Ian;
- Denef, Vincent J.;
- VerBerkmoes, Nathan C.;
- Shah, Manesh B.;
- Goltsman, Daniela;
- DiBartolo, Genevieve;
- Tyson, Gene W.;
- Allen, Eric E.;
- Ram, Rachna J.;
- Detter, J. Chris;
- Richardson, Paul;
- Thelen, Michael P.;
- Hettich, Robert L.;
- Banfield, Jillian F.
Publication type:
Letter
Ecological distribution and population physiology defined by proteomics in a natural microbial community.
Published in:
Molecular Systems Biology, 2010, v. 6, n. 1, p. 1, doi. 10.1038/msb.2010.30
By:
- Mueller, Ryan S;
- Denef, Vincent J;
- Kalnejais, Linda H;
- Suttle, K Blake;
- Thomas, Brian C;
- Wilmes, Paul;
- Smith, Richard L;
- Nordstrom, D Kirk;
- McCleskey, R Blaine;
- Shah, Manesh B;
- VerBerkmoes, Nathan C;
- Hettich, Robert L;
- Banfield, Jillian F
Publication type:
Article
Proteomics-inferred genome typing (PIGT) demonstrates inter-population recombination as a strategy for environmental adaptation.
Published in:
Environmental Microbiology, 2009, v. 11, n. 2, p. 313, doi. 10.1111/j.1462-2920.2008.01769.x
By:
- Denef, Vincent J.;
- VerBerkmoes, Nathan C.;
- Shah, Manesh B.;
- Abraham, Paul;
- Lefsrud, Mark;
- Hettich, Robert L.;
- Banfield, Jillian F.
Publication type:
Article
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes.
Published in:
Nature, 2015, v. 521, n. 7551, p. 208, doi. 10.1038/nature14238
By:
- Hultman, Jenni;
- Waldrop, Mark P.;
- Mackelprang, Rachel;
- David, Maude M.;
- McFarland, Jack;
- Blazewicz, Steven J.;
- Harden, Jennifer;
- Turetsky, Merritt R.;
- McGuire, A. David;
- Shah, Manesh B.;
- VerBerkmoes, Nathan C.;
- Lee, Lang Ho;
- Mavrommatis, Kostas;
- Jansson, Janet K.
Publication type:
Article

Found: 9