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Comparative Analysis of Genome of Ehrlichia sp. HF, a Model Bacterium to Study Fatal Human Ehrlichiosis.
Published in:
BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-020-07309-z
By:
- Lin, Mingqun;
- Xiong, Qingming;
- Chung, Matthew;
- Daugherty, Sean C.;
- Nagaraj, Sushma;
- Sengamalay, Naomi;
- Ott, Sandra;
- Godinez, Al;
- Tallon, Luke J.;
- Sadzewicz, Lisa;
- Fraser, Claire;
- Dunning Hotopp, Julie C.;
- Rikihisa, Yasuko
Publication type:
Article
Differential HHV‐6A gene expression in T cells and primary human astrocytes based on multi‐virus array analysis.
Published in:
Glia, 2006, v. 53, n. 8, p. 789, doi. 10.1002/glia.20333
By:
- Karen Yao;
- Matthew Mandel;
- Nahid Akyani;
- Kristen Maynard;
- Naomi Sengamalay;
- Julie Fotheringham;
- Elodie Ghedin;
- Fatah Kashanchi;
- Steven Jacobson
Publication type:
Article
Genome analysis linking recent European and African influenza (H5N1) viruses.
Published in:
2007
By:
- Salzberg, Steven L.;
- Kingsford, Carl;
- Cattoli, Giovanni;
- Spiro, David J.;
- Janies, Daniel A.;
- Aly, Mona Mehrez;
- Brown, Ian H.;
- Couacy-Hymann, Emmanuel;
- De Mia, Gian Mario;
- Do Huu Dung;
- Guercio, Annalisa;
- Joannis, Tony;
- Ali, Ali Safar Maken;
- Osmani, Azizullah;
- Padalino, Iolanda;
- Saad, Magdi D.;
- Savic, Vladimir;
- Sengamalay, Naomi A.;
- Yingst, Samuel;
- Zaborsky, Jennifer
Publication type:
journal article
Analysis of complete genome sequence and major surface antigens of Neorickettsia helminthoeca, causative agent of salmon poisoning disease.
Published in:
Microbial Biotechnology, 2017, v. 10, n. 4, p. 933, doi. 10.1111/1751-7915.12731
By:
- Lin, Mingqun;
- Bachman, Katherine;
- Cheng, Zhihui;
- Rikihisa, Yasuko;
- Daugherty, Sean C.;
- Nagaraj, Sushma;
- Sengamalay, Naomi;
- Ott, Sandra;
- Godinez, Al;
- Tallon, Luke J.;
- Sadzewicz, Lisa;
- Fraser, Claire;
- Dunning Hotopp, Julie C.
Publication type:
Article
Concurrent Mutations in ATM and Genes Associated with Common γ Chain Signaling in Peripheral T Cell Lymphoma.
Published in:
PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0141906
By:
- Simpson, Haley M.;
- Khan, Rashid Z.;
- Song, Chang;
- Sharma, Deva;
- Sadashivaiah, Kavitha;
- Furusawa, Aki;
- Liu, Xinyue;
- Nagaraj, Sushma;
- Sengamalay, Naomi;
- Sadzewicz, Lisa;
- Tallon, Luke J.;
- Chen, Qing C.;
- Livak, Ferenc;
- Rapoport, Aaron P.;
- Kimball, Amy;
- Banerjee, Arnob
Publication type:
Article
Transcriptional Attenuation Controls Macrolide Inducible Efflux and Resistance in Streptococcus pneumoniae and in Other Gram-Positive Bacteria Containing mef/mel(msr(D)) Elements.
Published in:
PLoS ONE, 2015, v. 10, n. 2, p. 1, doi. 10.1371/journal.pone.0116254
By:
- Chancey, Scott T.;
- Bai, Xianhe;
- Kumar, Nikhil;
- Drabek, Elliott F.;
- Daugherty, Sean C.;
- Colon, Thomas;
- Ott, Sandra;
- Sengamalay, Naomi;
- Sadzewicz, Lisa;
- Tallon, Luke J.;
- Fraser, Claire M.;
- Tettelin, Hervé;
- Stephens, David S.
Publication type:
Article
Simultaneous Transcriptional Profiling of Bacteria and Their Host Cells.
Published in:
PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0080597
By:
- Humphrys, Michael S.;
- Creasy, Todd;
- Sun, Yezhou;
- Shetty, Amol C.;
- Chibucos, Marcus C.;
- Drabek, Elliott F.;
- Fraser, Claire M.;
- Farooq, Umar;
- Sengamalay, Naomi;
- Ott, Sandy;
- Shou, Huizhong;
- Bavoil, Patrik M.;
- Mahurkar, Anup;
- Myers, Garry S. A.
Publication type:
Article
Viral genome sequencing by random priming methods.
Published in:
BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-5
By:
- Djikeng, Appolinaire;
- Halpin, Rebecca;
- Kuzmickas, Ryan;
- DePasse, Jay;
- Feldblyum, Jeremy;
- Sengamalay, Naomi;
- Afonso, Claudio;
- Xinsheng Zhang;
- Anderson, Norman G.;
- Ghedin, Elodie;
- Spiro, David J.
Publication type:
Article
The Evolutionary Genetics and Emergence of Avian Influenza Viruses in Wild Birds.
Published in:
PLoS Pathogens, 2008, v. 4, n. 5, p. 1, doi. 10.1371/journal.ppat.1000076
By:
- Dugan, Vivien G.;
- Chen, Rubing;
- Spiro, David J.;
- Sengamalay, Naomi;
- Zaborsky, Jennifer;
- Ghedin, Elodie;
- Nolting, Jacqueline;
- Swayne, David E.;
- Runstadler, Jonathan A.;
- Happ, George M.;
- Senne, Dennis A.;
- Ruixue Wang;
- Slemons, Richard D.;
- Holmes, Edward C.;
- Taubenberger, Jeffery K.
Publication type:
Article
Multiple Reassortment Events in the Evolutionary History of H1N1 Influenza A Virus Since 1918.
Published in:
PLoS Pathogens, 2008, v. 4, n. 2, p. 1, doi. 10.1371/journal.ppat.1000012
By:
- Nelson, Martha I.;
- Viboud, Cécile;
- Simonsen, Lone;
- Bennett, Ryan T.;
- Griesemer, Sara B.;
- St. George, Kirsten;
- Taylor, Jill;
- Spiro, David J.;
- Sengamalay, Naomi A.;
- Ghedin, Elodie;
- Taubenberger, Jeffery K.;
- Holmes, Edward C.
Publication type:
Article
Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus.
Published in:
PLoS Pathogens, 2006, v. 2, n. 12, p. 1144, doi. 10.1371/journal.ppat.0020125
By:
- Nelson, Martha I.;
- Simonsen, Lone;
- Viboud, Cecile;
- Miller, Mark A.;
- Taylor, Jill;
- St. George, Kirsten;
- Griesemer, Sara B.;
- Ghedi, Elodie;
- Sengamalay, Naomi A.;
- Spiro, David J.;
- Volkov, Igor;
- Grenfell, Bryan T.;
- Lipman, David J.;
- Taubenberger, Jeffery K.;
- Holmes, Edward C.
Publication type:
Article
Corrigendum: Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum.
Published in:
Nature Communications, 2014, v. 5, n. 1, p. 3028, doi. 10.1038/ncomms4028
By:
- Veluchamy, Alaguraj;
- Lin, Xin;
- Maumus, Florian;
- Rivarola, Maximo;
- Bhavsar, Jaysheel;
- Creasy, Todd;
- O'Brien, Kimberly;
- Sengamalay, Naomi A.;
- Tallon, Luke J.;
- Smith, Andrew D.;
- Rayko, Edda;
- Ahmed, Ikhlak;
- Crom, Stéphane Le;
- Farrant, Gregory K.;
- Sgro, Jean-Yves;
- Olson, Sue A.;
- Bondurant, Sandra Splinter;
- Allen, Andrew E.;
- Rabinowicz, Pablo D.;
- Sussman, Michael R.
Publication type:
Article
Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum.
Published in:
Nature Communications, 2013, v. 4, n. 7, p. 2091, doi. 10.1038/ncomms3091
By:
- Veluchamy, Alaguraj;
- Lin, Xin;
- Maumus, Florian;
- Rivarola, Maximo;
- Bhavsar, Jaysheel;
- Creasy, Todd;
- O'Brien, Kimberly;
- Sengamalay, Naomi A.;
- Tallon, Luke J.;
- Smith, Andrew D.;
- Rayko, Edda;
- Ahmed, Ikhlak;
- Crom, Stéphane Le;
- Farrant, Gregory K.;
- Sgro, Jean-Yves;
- Olson, Sue A.;
- Bondurant, Sandra Splinter;
- Allen, Andrew;
- Rabinowicz, Pablo D.;
- Sussman, Michael R.
Publication type:
Article
Direct detection of early-stage cancers using circulating tumor DNA.
Published in:
Science Translational Medicine, 2017, v. 9, n. 403, p. 1, doi. 10.1126/scitranslmed.aan2415
By:
- Phallen, Jillian;
- Sausen, Mark;
- Adleff, Vilmos;
- Leal, Alessandro;
- Hruban, Carolyn;
- White, James;
- Anagnostou, Valsamo;
- Fiksel, Jacob;
- Cristiano, Stephen;
- Papp, Eniko;
- Speir, Savannah;
- Reinert, Thomas;
- Worm Orntoft, Mai-Britt;
- Woodward, Brian D.;
- Murphy, Derek;
- Parpart-Li, Sonya;
- Riley, David;
- Nesselbush, Monica;
- Sengamalay, Naomi;
- Georgiadis, Andrew
Publication type:
Article
Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution.
Published in:
Nature, 2005, v. 437, n. 7062, p. 1162, doi. 10.1038/nature04239
By:
- Ghedin, Elodie;
- Sengamalay, Naomi A.;
- Shumway, Martin;
- Zaborsky, Jennifer;
- Feldblyum, Tamara;
- Subbu, Vik;
- Spiro, David J.;
- Sitz, Jeff;
- Koo, Hean;
- Bolotov, Pavel;
- Dernovoy, Dmitry;
- Tatusova, Tatiana;
- Yiming Bao;
- St George, Kirsten;
- Taylor, Jill;
- Lipman, David J.;
- Fraser, Claire M.;
- Taubenberger, Jeffery K.;
- Salzberg, Steven L.
Publication type:
Article
Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 738, doi. 10.1186/1471-2164-15-738
By:
- Ioannidis, Panagiotis;
- Yong Lu;
- Kumar, Nikhil;
- Creasy, Todd;
- Daugherty, Sean;
- Chibucos, Marcus C.;
- Orvis, Joshua;
- Shetty, Amol;
- Ott, Sandra;
- Flowers, Melissa;
- Sengamalay, Naomi;
- Tallon, Luke J.;
- Pick, Leslie;
- Dunning Hotopp, Julie C.
Publication type:
Article

Found: 16