Found: 16

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  • FANCD2 binding identifies conserved fragile sites at large transcribed genes in avian cells.

    Published in:
    Nucleic Acids Research, 2018, v. 46, n. 3, p. 1280, doi. 10.1093/nar/gkx1260
    By:
    • Pentzold, Constanze;
    • Shah, Shiraz Ali;
    • Hansen, Niels Richard;
    • Le Tallec, Benoît;
    • Seguin-Orlando, Andaine;
    • Debatisse, Michelle;
    • Lisby, Michael;
    • Oestergaard, Vibe H
    Publication type:
    Article

  • High‐Throughput DNA sequencing of ancient wood.

    Published in:
    Molecular Ecology, 2018, v. 27, n. 5, p. 1138, doi. 10.1111/mec.14514
    By:
    • Wagner, Stefanie;
    • Lagane, Frédéric;
    • Seguin‐Orlando, Andaine;
    • Schubert, Mikkel;
    • Leroy, Thibault;
    • Guichoux, Erwan;
    • Chancerel, Emilie;
    • Bech‐Hebelstrup, Inger;
    • Bernard, Vincent;
    • Billard, Cyrille;
    • Billaud, Yves;
    • Bolliger, Matthias;
    • Croutsch, Christophe;
    • Čufar, Katarina;
    • Eynaud, Frédérique;
    • Heussner, Karl Uwe;
    • Köninger, Joachim;
    • Langenegger, Fabien;
    • Leroy, Frédéric;
    • Lima, Christine
    Publication type:
    Article

  • Transcriptome and Genome Size Analysis of the Venus Flytrap.

    Published in:
    PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0123887
    By:
    • Jensen, Michael Krogh;
    • Vogt, Josef Korbinian;
    • Bressendorff, Simon;
    • Seguin-Orlando, Andaine;
    • Petersen, Morten;
    • Sicheritz-Pontén, Thomas;
    • Mundy, John
    Publication type:
    Article

  • Ligation Bias in Illumina Next-Generation DNA Libraries: Implications for Sequencing Ancient Genomes.

    Published in:
    PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0078575
    By:
    • Seguin-Orlando, Andaine;
    • Schubert, Mikkel;
    • Clary, Joel;
    • Stagegaard, Julia;
    • Alberdi, Maria T.;
    • Prado, José Luis;
    • Prieto, Alfredo;
    • Willerslev, Eske;
    • Orlando, Ludovic
    Publication type:
    Article

  • Mitochondrial Phylogenomics of Modern and Ancient Equids.

    Published in:
    PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0055950
    By:
    • Vilstrup, Julia T.;
    • Seguin-Orlando, Andaine;
    • Stiller, Mathias;
    • Ginolhac, Aurelien;
    • Raghavan, Maanasa;
    • Nielsen, Sandra C. A.;
    • Weinstock, Jacobo;
    • Froese, Duane;
    • Vasiliev, Sergei K.;
    • Ovodov, Nikolai D.;
    • Clary, Joel;
    • Helgen, Kristofer M.;
    • Fleischer, Robert C.;
    • Cooper, Alan;
    • Shapiro, Beth;
    • Orlando, Ludovic
    Publication type:
    Article

  • Fast, Accurate and Automatic Ancient Nucleosome and Methylation Maps with epiPALEOMIX.

    Published in:
    Molecular Biology & Evolution, 2016, v. 33, n. 12, p. 3284, doi. 10.1093/molbev/msw184
    By:
    • Hanghøj, Kristian;
    • Seguin-Orlando, Andaine;
    • Schubert, Mikkel;
    • Madsen, Tobias;
    • Pedersen, Jakob Skou;
    • Willerslev, Eske;
    • Orlando, Ludovic
    Publication type:
    Article

  • Genomic Characterization of a South American Phytophthora Hybrid Mandates Reassessment of the Geographic Origins of Phytophthora infestans.

    Published in:
    Molecular Biology & Evolution, 2016, v. 33, n. 2, p. 478, doi. 10.1093/molbev/msv241
    By:
    • Martin, Michael D.;
    • Vieira, Filipe G.;
    • Ho, Simon Y. W.;
    • Wales, Nathan;
    • Schubert, Mikkel;
    • Seguin-Orlando, Andaine;
    • Ristaino, Jean B.;
    • Gilbert, M. Thomas P.
    Publication type:
    Article

  • Reconstructing genome evolution in historic samples of the Irish potato famine pathogen.

    Published in:
    Nature Communications, 2013, v. 4, n. 7, p. 2172, doi. 10.1038/ncomms3172
    By:
    • Martin, Michael D.;
    • Cappellini, Enrico;
    • Samaniego, Jose A.;
    • Zepeda, M. Lisandra;
    • Campos, Paula F.;
    • Seguin-Orlando, Andaine;
    • Wales, Nathan;
    • Orlando, Ludovic;
    • Ho, Simon Y. W.;
    • Dietrich, Fred S.;
    • Mieczkowski, Piotr A.;
    • Heitman, Joseph;
    • Willerslev, Eske;
    • Krogh, Anders;
    • Ristaino, Jean B.;
    • Gilbert, M. Thomas P.
    Publication type:
    Article

  • Mitochondrial genome sequences reveal evolutionary relationships of the Phytophthora 1c clade species.

    Published in:
    Current Genetics, 2015, v. 61, n. 4, p. 567, doi. 10.1007/s00294-015-0480-3
    By:
    • Lassiter, Erica;
    • Russ, Carsten;
    • Nusbaum, Chad;
    • Zeng, Qiandong;
    • Saville, Amanda;
    • Olarte, Rodrigo;
    • Carbone, Ignazio;
    • Hu, Chia-Hui;
    • Seguin-Orlando, Andaine;
    • Samaniego, Jose;
    • Thorne, Jeffrey;
    • Ristaino, Jean
    Publication type:
    Article

  • Pros and cons of methylation-based enrichment methods for ancient DNA.

    Published in:
    Scientific Reports, 2015, p. 11826, doi. 10.1038/srep11826
    By:
    • Seguin-Orlando, Andaine;
    • Gamba, Cristina;
    • Sarkissian, Clio Der;
    • Ermini, Luca;
    • Louvel, Guillaume;
    • Boulygina, Eugenia;
    • Sokolov, Alexey;
    • Nedoluzhko, Artem;
    • Lorenzen, Eline D.;
    • Lopez, Patricio;
    • McDonald, H. Gregory;
    • Scott, Eric;
    • Tikhonov, Alexei;
    • Stafford,, Thomas W.;
    • Alfarhan, Ahmed H.;
    • Alquraishi, Saleh A.;
    • Al-Rasheid, Khaled A. S.;
    • Shapiro, Beth;
    • Willerslev, Eske;
    • Prokhortchouk, Egor
    Publication type:
    Article

  • Tracking population structure and phenology through time using ancient genomes from waterlogged white oak wood.

    Published in:
    Molecular Ecology, 2024, v. 33, n. 3, p. 1, doi. 10.1111/mec.16859
    By:
    • Wagner, Stefanie;
    • Seguin‐Orlando, Andaine;
    • Leplé, Jean‐Charles;
    • Leroy, Thibault;
    • Lalanne, Céline;
    • Labadie, Karine;
    • Aury, Jean‐Marc;
    • Poirier, Sandy;
    • Wincker, Patrick;
    • Plomion, Christophe;
    • Kremer, Antoine;
    • Orlando, Ludovic
    Publication type:
    Article

  • Ancient horse genomes reveal the timing and extent of dispersals across the Bering Land Bridge.

    Published in:
    Molecular Ecology, 2021, v. 30, n. 23, p. 6144, doi. 10.1111/mec.15977
    By:
    • Vershinina, Alisa O.;
    • Heintzman, Peter D.;
    • Froese, Duane G.;
    • Zazula, Grant;
    • Cassatt‐Johnstone, Molly;
    • Dalén, Love;
    • Der Sarkissian, Clio;
    • Dunn, Shelby G.;
    • Ermini, Luca;
    • Gamba, Cristina;
    • Groves, Pamela;
    • Kapp, Joshua D.;
    • Mann, Daniel H.;
    • Seguin‐Orlando, Andaine;
    • Southon, John;
    • Stiller, Mathias;
    • Wooller, Matthew J.;
    • Baryshnikov, Gennady;
    • Gimranov, Dmitry;
    • Scott, Eric
    Publication type:
    Article

  • The Effects of Captivity on the Mammalian Gut Microbiome.

    Published in:
    Integrative & Comparative Biology, 2017, v. 57, n. 4, p. 690, doi. 10.1093/icb/icx090
    By:
    • McKenzie, Valerie J.;
    • Se Jin Song;
    • Delsuc, Frédéric;
    • Prest, Tiffany L.;
    • Oliverio, Angela M.;
    • Korpita, Timothy M.;
    • Alexiev, Alexandra;
    • Amato, Katherine R.;
    • Metcalf, Jessica L.;
    • Kowalewski, Martin;
    • Avenant, Nico L.;
    • Link, Andres;
    • Di Fiore, Anthony;
    • Seguin-Orlando, Andaine;
    • Feh, Claudia;
    • Orlando, Ludovic;
    • Mendelson, Joseph R.;
    • Sanders, Jon;
    • Knight, Rob
    Publication type:
    Article

  • Assessing the impact of USER‐treatment on hyRAD capture applied to ancient DNA.

    Published in:
    Molecular Ecology Resources, 2022, v. 22, n. 6, p. 2262, doi. 10.1111/1755-0998.13619
    By:
    • Suchan, Tomasz;
    • Chauvey, Lorelei;
    • Poullet, Marine;
    • Tonasso‐Calvière, Laure;
    • Schiavinato, Stéphanie;
    • Clavel, Pierre;
    • Clavel, Benoit;
    • Lepetz, Sébastien;
    • Seguin‐Orlando, Andaine;
    • Orlando, Ludovic;
    • Calvignac‐Spencer, Sebastien
    Publication type:
    Article

  • Experimental conditions improving in-solution target enrichment for ancient DNA.

    Published in:
    Molecular Ecology Resources, 2017, v. 17, n. 3, p. 508, doi. 10.1111/1755-0998.12595
    By:
    • Cruz‐Dávalos, Diana I.;
    • Llamas, Bastien;
    • Gaunitz, Charleen;
    • Fages, Antoine;
    • Gamba, Cristina;
    • Soubrier, Julien;
    • Librado, Pablo;
    • Seguin‐Orlando, Andaine;
    • Pruvost, Mélanie;
    • Alfarhan, Ahmed H.;
    • Alquraishi, Saleh A.;
    • Al‐Rasheid, Khaled A. S.;
    • Scheu, Amelie;
    • Beneke, Norbert;
    • Ludwig, Arne;
    • Cooper, Alan;
    • Willerslev, Eske;
    • Orlando, Ludovic
    Publication type:
    Article

  • Early pastoral economies along the Ancient Silk Road: Biomolecular evidence from the Alay Valley, Kyrgyzstan.

    Published in:
    PLoS ONE, 2018, v. 13, n. 10, p. 1, doi. 10.1371/journal.pone.0205646
    By:
    • Taylor, William;
    • Shnaider, Svetlana;
    • Abdykanova, Aida;
    • Fages, Antoine;
    • Welker, Frido;
    • Irmer, Franziska;
    • Seguin-Orlando, Andaine;
    • Khan, Naveed;
    • Douka, Katerina;
    • Kolobova, Ksenia;
    • Orlando, Ludovic;
    • Krivoshapkin, Andrei;
    • Boivin, Nicole
    Publication type:
    Article