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Aberrant epigenome in iPSC-derived dopaminergic neurons from Parkinson's disease patients.
Published in:
EMBO Molecular Medicine, 2015, v. 7, n. 12, p. 1529, doi. 10.15252/emmm.201505439
By:
- Fernández‐Santiago, Rubén;
- Carballo‐Carbajal, Iria;
- Castellano, Giancarlo;
- Torrent, Roger;
- Richaud, Yvonne;
- Sánchez‐Danés, Adriana;
- Vilarrasa‐Blasi, Roser;
- Sánchez‐Pla, Alex;
- Mosquera, José Luis;
- Soriano, Jordi;
- López‐Barneo, José;
- Canals, Josep M;
- Alberch, Jordi;
- Raya, Ángel;
- Vila, Miquel;
- Consiglio, Antonella;
- Martín‐Subero, José I;
- Ezquerra, Mario;
- Tolosa, Eduardo
Publication type:
Article
Exploration of the gut‐brain axis through metabolomics identifies serum propionic acid associated with higher cognitive decline in older persons.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2022, v. 18, n. 11, p. 1, doi. 10.1002/alz.060309
By:
- Neuffer, Jeanne;
- González‐Domínguez, Raúl;
- Lefèvre‐Arbogast, Sophie;
- Low, Dorrain Yanwen;
- Driollet, Bénédicte;
- Helmer, Catherine;
- Preez, Andrea Du;
- de Lucia, Chiara;
- Ruigrok, Silvie R;
- Altendorfer, Barbara;
- Aigner, Ludwig;
- Lucassen, Paul J.;
- Korosi, Aniko;
- Thuret, Sandrine;
- Manach, Claudine;
- Pallàs, Mercè;
- Urpi‐Sarda, Mireia;
- Sánchez‐Pla, Alex;
- Andres‐Lacueva, Cristina;
- Samieri, Cécilia
Publication type:
Article
The serum metabolome mediates the concert of diet, exercise, and neurogenesis, determining the risk for cognitive decline and dementia.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2022, v. 18, n. 4, p. 654, doi. 10.1002/alz.12428
By:
- Du Preez, Andrea;
- Lefèvre‐Arbogast, Sophie;
- Houghton, Vikki;
- de Lucia, Chiara;
- Low, Dorrain Y.;
- Helmer, Catherine;
- Féart, Catherine;
- Delcourt, Cécile;
- Proust‐Lima, Cécile;
- Pallàs, Mercè;
- Ruigrok, Silvie R.;
- Altendorfer, Barbara;
- González‐Domínguez, Raúl;
- Sánchez‐Pla, Alex;
- Urpi‐Sardà, Mireia;
- Andres‐Lacueva, Cristina;
- Aigner, Ludwig;
- Lucassen, Paul J.;
- Korosi, Aniko;
- Manach, Claudine
Publication type:
Article
Differential gene expression in genetic and early‐onset Alzheimer's disease in two biological samples: Brain tissue and lymphoblastoid cell lines: Genetics/omics and systems biology.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2020, v. 16, n. 11, p. 1, doi. 10.1002/alz.042671
By:
- Ramos‐Campoy, Oscar;
- Lladó, Albert;
- Bosch, Beatriz;
- Aldecoa, Iban;
- Gonzalo, Ricardo;
- Muñoz, Cristina;
- Ximelis, Teresa;
- Fernandez‐Villullas, Guadalupe;
- Balasa, Mircea;
- Sanchez‐Pla, Alex;
- Sanchez‐Valle, Raquel;
- Antonell, Anna
Publication type:
Article
Exposing and Overcoming Limitations of Clinical Laboratory Tests in COVID-19 by Adding Immunological Parameters; A Retrospective Cohort Analysis and Pilot Study.
Published in:
Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.902837
By:
- Sánchez-Montalvá, Adrián;
- Álvarez-Sierra, Daniel;
- Martínez-Gallo, Mónica;
- Perurena-Prieto, Janire;
- Arrese-Muñoz, Iria;
- Ruiz-Rodríguez, Juan Carlos;
- Espinosa-Pereiro, Juan;
- Bosch-Nicolau, Pau;
- Martínez-Gómez, Xavier;
- Antón, Andrés;
- Martínez-Valle, Ferran;
- Riveiro-Barciela, Mar;
- Blanco-Grau, Albert;
- Rodríguez-Frias, Francisco;
- Castellano-Escuder, Pol;
- Poyatos-Canton, Elisabet;
- Bas-Minguet, Jordi;
- Martínez-Cáceres, Eva;
- Sánchez-Pla, Alex;
- Zurera-Egea, Coral
Publication type:
Article
fobitools framework: the first steps towards food enrichment analysis.
Published in:
Bioinformatics, 2021, v. 37, n. 21, p. 3969, doi. 10.1093/bioinformatics/btab626
By:
- Castellano-Escuder, Pol;
- Andrés-Lacueva, Cristina;
- Sánchez-Pla, Alex
Publication type:
Article
Circulating SOD2 Is a Candidate Response Biomarker for Neoadjuvant Therapy in Breast Cancer.
Published in:
Cancers, 2022, v. 14, n. 16, p. 3858, doi. 10.3390/cancers14163858
By:
- Juliachs, Mercè;
- Pujals, Mireia;
- Bellio, Chiara;
- Meo-Evoli, Nathalie;
- Duran, Juan M.;
- Zamora, Esther;
- Parés, Mireia;
- Suñol, Anna;
- Méndez, Olga;
- Sánchez-Pla, Alex;
- Canals, Francesc;
- Saura, Cristina;
- Villanueva, Josep
Publication type:
Article
GDF15 Is an Eribulin Response Biomarker also Required for Survival of DTP Breast Cancer Cells.
Published in:
Cancers, 2022, v. 14, n. 10, p. 2562, doi. 10.3390/cancers14102562
By:
- Bellio, Chiara;
- Emperador, Marta;
- Castellano, Pol;
- Gris-Oliver, Albert;
- Canals, Francesc;
- Sánchez-Pla, Alex;
- Zamora, Esther;
- Arribas, Joaquín;
- Saura, Cristina;
- Serra, Violeta;
- Tabernero, Josep;
- Littlefield, Bruce A.;
- Villanueva, Josep
Publication type:
Article
Association of dietary and nutritional factors with cognitive decline, dementia, and depressive symptomatology in older individuals according to a neurogenesis-centred biological susceptibility to brain ageing.
Published in:
Age & Ageing, 2024, v. 53, p. ii47, doi. 10.1093/ageing/afae042
By:
- Preez, Andrea Du;
- Lefèvre-Arbogast, Sophie;
- González-Domínguez, Raúl;
- Houghton, Vikki;
- Lucia, Chiara de;
- Lee, Hyunah;
- Low, Dorrain Y;
- Helmer, Catherine;
- Féart, Catherine;
- Delcourt, Cécile;
- Proust-Lima, Cécile;
- Pallàs, Mercè;
- Sánchez-Pla, Alex;
- Urpi-Sardà, Mireia;
- Ruigrok, Silvie R;
- Altendorfer, Barbara;
- Aigner, Ludwig;
- Lucassen, Paul J;
- Korosi, Aniko;
- Manach, Claudine
Publication type:
Article
FOBI: an ontology to represent food intake data and associate it with metabolomic data.
Published in:
Database: The Journal of Biological Databases & Curation, 2020, v. 2020, p. 1, doi. 10.1093/databa/baaa033
By:
- Castellano-Escuder, Pol;
- González-Domínguez, Raúl;
- Wishart, David S;
- Andrés-Lacueva, Cristina;
- Sánchez-Pla, Alex
Publication type:
Article
Molecular mechanisms of tungstate-induced pancreatic plasticity: a transcriptomics approach.
Published in:
BMC Genomics, 2009, v. 10, p. 406, doi. 10.1186/1471-2164-10-406
By:
- Altirriba, Jordi;
- Barbera, Albert;
- Del Zotto, Héctor;
- Nadal, Belen;
- Piquer, Sandra;
- Sánchez-Pla, Alex;
- Gagliardino, Juan J.;
- Gomis, Ramon
Publication type:
Article
An equivalence approach to the integrative analysis of feature lists.
Published in:
BMC Bioinformatics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12859-019-3008-x
By:
- Sánchez-Pla, Alex;
- Salicrú, Miquel;
- Ocaña, Jordi
Publication type:
Article
Sharing sensitive data in life sciences: an overview of centralized and federated approaches.
Published in:
Briefings in Bioinformatics, 2024, v. 25, n. 4, p. 1, doi. 10.1093/bib/bbae262
By:
- Rujano, Maria A;
- Boiten, Jan-Willem;
- Ohmann, Christian;
- Canham, Steve;
- Contrino, Sergio;
- David, Romain;
- Ewbank, Jonathan;
- Filippone, Claudia;
- Connellan, Claire;
- Custers, Ilse;
- Nuland, Rick van;
- Mayrhofer, Michaela Th;
- Holub, Petr;
- Álvarez, Eva García;
- Bacry, Emmanuel;
- Hughes, Nigel;
- Freeberg, Mallory A;
- Schaffhauser, Birgit;
- Wagener, Harald;
- Sánchez-Pla, Alex
Publication type:
Article
POMAShiny: A user-friendly web-based workflow for metabolomics and proteomics data analysis.
Published in:
PLoS Computational Biology, 2021, v. 17, n. 6, p. 1, doi. 10.1371/journal.pcbi.1009148
By:
- Castellano-Escuder, Pol;
- González-Domínguez, Raúl;
- Carmona-Pontaque, Francesc;
- Andrés-Lacueva, Cristina;
- Sánchez-Pla, Alex
Publication type:
Article
Prevalence and description of disorders of gut–brain interaction in Spain according to the results of the Rome Foundation Global Epidemiology Study.
Published in:
Neurogastroenterology & Motility, 2023, v. 35, n. 6, p. 1, doi. 10.1111/nmo.14582
By:
- Flores‐Arriaga, Joel;
- Aso, María C.;
- Izagirre, Arantzazu;
- Sperber, Ami D.;
- Palsson, Olafur S.;
- Bangdiwala, Shrikant I.;
- Lanas, Ángel;
- Bujanda, Luis;
- Lobo, Beatriz;
- Alonso‐Cotoner, Carmen;
- Sánchez‐Pla, Álex;
- Santos, Javier
Publication type:
Article
PTOV1 is overexpressed in human high-grade malignant tumors.
Published in:
2011
By:
- Fernández, Sara;
- Mosquera, Jose L.;
- Alaña, Lide;
- Sanchez-Pla, Alex;
- Morote, Juan;
- Cajal, Santiago Ramón y;
- Reventós, Jaume;
- De Torres, Inés;
- Paciucci, Rosanna;
- Fernández, Sara;
- Alaña, Lide;
- Ramón Y Cajal, Santiago;
- Reventós, Jaume;
- de Torres, Inés
Publication type:
journal article
Hypothesis testing approaches to the exon prediction problem.
Published in:
Bioinformatics, 2006, v. 22, n. 24, p. 3003, doi. 10.1093/bioinformatics/btl544
By:
- Vilardell, Mireia;
- Sánchez-Pla, Alex
Publication type:
Article
Evaluation and comparison of bioinformatic tools for the enrichment analysis of metabolomics data.
Published in:
BMC Bioinformatics, 2018, v. 19, p. 1, doi. 10.1186/s12859-017-2006-0
By:
- Marco-Ramell, Anna;
- Palau-Rodriguez, Magali;
- Alay, Ania;
- Tulipani, Sara;
- Urpi-Sarda, Mireia;
- Sanchez-Pla, Alex;
- Andres-Lacueva, Cristina
Publication type:
Article
Comparative transcriptomic profile of tolerogenic dendritic cells differentiated with vitamin D3, dexamethasone and rapamycin.
Published in:
Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-33248-7
By:
- Navarro-Barriuso, Juan;
- Mansilla, María José;
- Naranjo-Gómez, Mar;
- Sánchez-Pla, Alex;
- Quirant-Sánchez, Bibiana;
- Teniente-Serra, Aina;
- Ramo-Tello, Cristina;
- Martínez-Cáceres, Eva M.
Publication type:
Article
Cell Senescence-Related Pathways Are Enriched in Breast Cancer Patients With Late Toxicity After Radiotherapy and Low Radiation-Induced Lymphocyte Apoptosis.
Published in:
Frontiers in Oncology, 2022, v. 12, p. 1, doi. 10.3389/fonc.2022.825703
By:
- Aguado-Flor, Ester;
- Fuentes-Raspall, María J.;
- Gonzalo, Ricardo;
- Alonso, Carmen;
- Ramón y Cajal, Teresa;
- Fisas, David;
- Seoane, Alejandro;
- Sánchez-Pla, Álex;
- Giralt, Jordi;
- Díez, Orland;
- Gutiérrez-Enríquez, Sara
Publication type:
Article
Apolipoprotein E and sex modulate fatty acid metabolism in a prospective observational study of cognitive decline.
Published in:
Alzheimer's Research & Therapy, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13195-021-00948-8
By:
- González-Domínguez, Raúl;
- Castellano-Escuder, Pol;
- Lefèvre-Arbogast, Sophie;
- Low, Dorrain Y.;
- Du Preez, Andrea;
- Ruigrok, Silvie R.;
- Lee, Hyunah;
- Helmer, Catherine;
- Pallàs, Mercè;
- Urpi-Sarda, Mireia;
- Sánchez-Pla, Alex;
- Korosi, Aniko;
- Lucassen, Paul J.;
- Aigner, Ludwig;
- Manach, Claudine;
- Thuret, Sandrine;
- Samieri, Cécilia;
- Andres-Lacueva, Cristina
Publication type:
Article
Metabotypes of response to bariatric surgery independent of the magnitude of weight loss.
Published in:
PLoS ONE, 2018, v. 13, n. 5, p. 1, doi. 10.1371/journal.pone.0198214
By:
- Palau-Rodriguez, Magali;
- Tulipani, Sara;
- Marco-Ramell, Anna;
- Miñarro, Antonio;
- Jáuregui, Olga;
- Sanchez-Pla, Alex;
- Ramos-Molina, Bruno;
- Tinahones, Francisco J.;
- Andres-Lacueva, Cristina
Publication type:
Article
A Mediterranean Diet‐Based Metabolomic Score and Cognitive Decline in Older Adults: A Case–Control Analysis Nested within the Three‐City Cohort Study.
Published in:
Molecular Nutrition & Food Research, 2024, v. 68, n. 13, p. 1, doi. 10.1002/mnfr.202300271
By:
- Tor‐Roca, Alba;
- Sánchez‐Pla, Alex;
- Korosi, Aniko;
- Pallàs, Mercè;
- Lucassen, Paul J.;
- Castellano‐Escuder, Pol;
- Aigner, Ludwig;
- González‐Domínguez, Raúl;
- Manach, Claudine;
- Carmona, Francisco;
- Vegas, Esteban;
- Helmer, Catherine;
- Feart, Catherine;
- Lefèvre‐Arbogast, Sophie;
- Neuffer, Jeanne;
- Lee, Hyunah;
- Thuret, Sandrine;
- Andres‐Lacueva, Cristina;
- Samieri, Cécilia;
- Urpi‐Sarda, Mireia
Publication type:
Article
Food and Microbiota Metabolites Associate with Cognitive Decline in Older Subjects: A 12‐Year Prospective Study.
Published in:
Molecular Nutrition & Food Research, 2021, v. 65, n. 23, p. 1, doi. 10.1002/mnfr.202100606
By:
- González‐Domínguez, Raúl;
- Castellano‐Escuder, Pol;
- Carmona, Francisco;
- Lefèvre‐Arbogast, Sophie;
- Low, Dorrain Y.;
- Du Preez, Andrea;
- Ruigrok, Silvie R.;
- Manach, Claudine;
- Urpi‐Sarda, Mireia;
- Korosi, Aniko;
- Lucassen, Paul J.;
- Aigner, Ludwig;
- Pallàs, Mercè;
- Thuret, Sandrine;
- Samieri, Cécilia;
- Sánchez‐Pla, Alex;
- Andres‐Lacueva, Cristina
Publication type:
Article
An equivalence test between features lists, based on the Sorensen–Dice index and the joint frequencies of GO term enrichment.
Published in:
BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-022-04739-2
By:
- Flores, Pablo;
- Salicrú, Miquel;
- Sánchez-Pla, Alex;
- Ocaña, Jordi
Publication type:
Article
Methylation regulation of Antiviral host factors, Interferon Stimulated Genes (ISGs) and T-cell responses associated with natural HIV control.
Published in:
PLoS Pathogens, 2020, v. 16, n. 8, p. 1, doi. 10.1371/journal.ppat.1008678
By:
- Oriol-Tordera, Bruna;
- Berdasco, Maria;
- Llano, Anuska;
- Mothe, Beatriz;
- Gálvez, Cristina;
- Martinez-Picado, Javier;
- Carrillo, Jorge;
- Blanco, Julià;
- Duran-Castells, Clara;
- Ganoza, Carmela;
- Sanchez, Jorge;
- Clotet, Bonaventura;
- Calle, Maria Luz;
- Sánchez-Pla, Alex;
- Esteller, Manel;
- Brander, Christian;
- Ruiz-Riol, Marta
Publication type:
Article
Integrative Multi-omics Analysis to Characterize Human Brain Ischemia.
Published in:
Molecular Neurobiology, 2021, v. 58, n. 8, p. 4107, doi. 10.1007/s12035-021-02401-1
By:
- Ramiro, Laura;
- García-Berrocoso, Teresa;
- Briansó, Ferran;
- Goicoechea, Leire;
- Simats, Alba;
- Llombart, Víctor;
- Gonzalo, Ricardo;
- Hainard, Alexandre;
- Martínez-Saez, Elena;
- Canals, Francesc;
- Sanchez, Jean-Charles;
- Sánchez-Pla, Alex;
- Montaner, Joan
Publication type:
Article
Dietary Sources of Anthocyanins and Their Association with Metabolome Biomarkers and Cardiometabolic Risk Factors in an Observational Study.
Published in:
Nutrients, 2023, v. 15, n. 5, p. 1208, doi. 10.3390/nu15051208
By:
- Mostafa, Hamza;
- Meroño, Tomás;
- Miñarro, Antonio;
- Sánchez-Pla, Alex;
- Lanuza, Fabián;
- Zamora-Ros, Raul;
- Rostgaard-Hansen, Agnetha Linn;
- Estanyol-Torres, Núria;
- Cubedo-Culleré, Marta;
- Tjønneland, Anne;
- Landberg, Rikard;
- Halkjær, Jytte;
- Andres-Lacueva, Cristina
Publication type:
Article
Exploration of the Gut–Brain Axis through Metabolomics Identifies Serum Propionic Acid Associated with Higher Cognitive Decline in Older Persons.
Published in:
Nutrients, 2022, v. 14, n. 21, p. 4688, doi. 10.3390/nu14214688
By:
- Neuffer, Jeanne;
- González-Domínguez, Raúl;
- Lefèvre-Arbogast, Sophie;
- Low, Dorrain Y.;
- Driollet, Bénédicte;
- Helmer, Catherine;
- Du Preez, Andrea;
- de Lucia, Chiara;
- Ruigrok, Silvie R.;
- Altendorfer, Barbara;
- Aigner, Ludwig;
- Lucassen, Paul J.;
- Korosi, Aniko;
- Thuret, Sandrine;
- Manach, Claudine;
- Pallàs, Mercè;
- Urpi-Sardà, Mireia;
- Sánchez-Pla, Alex;
- Andres-Lacueva, Cristina;
- Samieri, Cécilia
Publication type:
Article

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