Found: 9

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  • BARD1 germline variants induce haploinsufficiency and DNA repair defects in neuroblastoma.

    Published in:
    JNCI: Journal of the National Cancer Institute, 2024, v. 116, n. 1, p. 138, doi. 10.1093/jnci/djad182
    By:
    • Randall, Michael P;
    • Egolf, Laura E;
    • Vaksman, Zalman;
    • Samanta, Minu;
    • Tsang, Matthew;
    • Groff, David;
    • Evans, J Perry;
    • Rokita, Jo Lynne;
    • Layeghifard, Mehdi;
    • Shlien, Adam;
    • Maris, John M;
    • Diskin, Sharon J;
    • Bosse, Kristopher R
    Publication type:
    Article

  • Epigenomic profiling of neuroblastoma cell lines.

    Published in:
    Scientific Data, 2020, v. 7, n. 1, p. 1, doi. 10.1038/s41597-020-0458-y
    By:
    • Upton, Kristen;
    • Modi, Apexa;
    • Patel, Khushbu;
    • Kendsersky, Nathan M.;
    • Conkrite, Karina L.;
    • Sussman, Robyn T.;
    • Way, Gregory P.;
    • Adams, Rebecca N.;
    • Sacks, Gregory I.;
    • Fortina, Paolo;
    • Diskin, Sharon J.;
    • Maris, John M.;
    • Rokita, Jo Lynne
    Publication type:
    Article

  • AutoGVP: a dockerized workflow integrating ClinVar and InterVar germline sequence variant classification.

    Published in:
    Bioinformatics, 2024, v. 40, n. 3, p. 1, doi. 10.1093/bioinformatics/btae114
    By:
    • Kim, Jung;
    • Naqvi, Ammar S;
    • Corbett, Ryan J;
    • Kaufman, Rebecca S;
    • Vaksman, Zalman;
    • Brown, Miguel A;
    • Miller, Daniel P;
    • Phul, Saksham;
    • Geng, Zhuangzhuang;
    • Storm, Phillip B;
    • Resnick, Adam C;
    • Stewart, Douglas R;
    • Rokita, Jo Lynne;
    • Diskin, Sharon J
    Publication type:
    Article

  • Limited antitumor activity of combined BET and MEK inhibition in neuroblastoma.

    Published in:
    2020
    By:
    • Healy, Jason R.;
    • Hart, Lori S.;
    • Shazad, Alexander L.;
    • Gagliardi, Maria E.;
    • Tsang, Matthew;
    • Elias, Jimmy;
    • Ruden, Jacob;
    • Farrel, Alvin;
    • Rokita, Jo Lynne;
    • Li, Yimei;
    • Wyce, Anastasia;
    • Barbash, Olena;
    • Batra, Vandana;
    • Samanta, Minu;
    • Maris, John M.;
    • Schnepp, Robert W.
    Publication type:
    journal article

  • CAMKV Is a Candidate Immunotherapeutic Target in MYCN Amplified Neuroblastoma.

    Published in:
    Frontiers in Oncology, 2020, p. 1, doi. 10.3389/fonc.2020.00302
    By:
    • Sussman, Robyn T.;
    • Rokita, Jo Lynne;
    • Huang, Kevin;
    • Raman, Pichai;
    • Rathi, Komal S.;
    • Martinez, Daniel;
    • Bosse, Kristopher R.;
    • Lane, Maria;
    • Hart, Lori S.;
    • Bhatti, Tricia;
    • Pawel, Bruce;
    • Maris, John M.
    Publication type:
    Article

  • ASCL1 is a MYCN- and LMO1-dependent member of the adrenergic neuroblastoma core regulatory circuitry.

    Published in:
    Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-13515-5
    By:
    • Wang, Lu;
    • Tan, Tze King;
    • Durbin, Adam D.;
    • Zimmerman, Mark W.;
    • Abraham, Brian J.;
    • Tan, Shi Hao;
    • Ngoc, Phuong Cao Thi;
    • Weichert-Leahey, Nina;
    • Akahane, Koshi;
    • Lawton, Lee N.;
    • Rokita, Jo Lynne;
    • Maris, John M.;
    • Young, Richard A.;
    • Look, A. Thomas;
    • Sanda, Takaomi
    Publication type:
    Article

  • annoFuse: an R Package to annotate, prioritize, and interactively explore putative oncogenic RNA fusions.

    Published in:
    BMC Bioinformatics, 2020, v. 21, n. 17, p. 1, doi. 10.1186/s12859-020-03922-7
    By:
    • Gaonkar, Krutika S.;
    • Marini, Federico;
    • Rathi, Komal S.;
    • Jain, Payal;
    • Zhu, Yuankun;
    • Chimicles, Nicholas A.;
    • Brown, Miguel A.;
    • Naqvi, Ammar S.;
    • Zhang, Bo;
    • Storm, Phillip B.;
    • Maris, John M.;
    • Raman, Pichai;
    • Resnick, Adam C.;
    • Strauch, Konstantin;
    • Taroni, Jaclyn N.;
    • Rokita, Jo Lynne
    Publication type:
    Article

  • Pediatric high-grade glioma resources from the Children's Brain Tumor Tissue Consortium.

    Published in:
    Neuro-Oncology, 2020, v. 22, n. 1, p. 163, doi. 10.1093/neuonc/noz192
    By:
    • Ijaz, Heba;
    • Koptyra, Mateusz;
    • Gaonkar, Krutika S;
    • Rokita, Jo Lynne;
    • Baubet, Valerie P;
    • Tauhid, Lamiya;
    • Zhu, Yuankun;
    • Brown, Miguel;
    • Lopez, Gonzalo;
    • Zhang, Bo;
    • Diskin, Sharon J;
    • Vaksman, Zalman;
    • Consortium, Children's Brain Tumor Tissue;
    • Mason, Jennifer L;
    • Appert, Elizabeth;
    • Lilly, Jena;
    • Lulla, Rishi;
    • Raedt, Thomas De;
    • Heath, Allison P;
    • Felmeister, Alex
    Publication type:
    Article

  • A transcriptome-based classifier to determine molecular subtypes in medulloblastoma.

    Published in:
    PLoS Computational Biology, 2020, v. 16, n. 10, p. 1, doi. 10.1371/journal.pcbi.1008263
    By:
    • Rathi, Komal S.;
    • Arif, Sherjeel;
    • Koptyra, Mateusz;
    • Naqvi, Ammar S.;
    • Taylor, Deanne M.;
    • Storm, Phillip B.;
    • Resnick, Adam C.;
    • Rokita, Jo Lynne;
    • Raman, Pichai
    Publication type:
    Article