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Epigenetic and Metabolomic Biomarkers for Biological Age: A Comparative Analysis of Mortality and Frailty Risk.
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- Journals of Gerontology Series A: Biological Sciences & Medical Sciences, 2023, v. 78, n. 10, p. 1753, doi. 10.1093/gerona/glad137
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- Article
Polygenic Risk Score of Longevity Predicts Longer Survival Across an Age Continuum.
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- Journals of Gerontology Series A: Biological Sciences & Medical Sciences, 2021, v. 76, n. 5, p. 750, doi. 10.1093/gerona/glaa289
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- Article
A framework for employing longitudinally collected multicenter electronic health records to stratify heterogeneous patient populations on disease history.
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- 2022
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- journal article
Single-Cell Transcriptomics Links Loss of Human Pancreatic β-Cell Identity to ER Stress.
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- Cells (2073-4409), 2021, v. 10, n. 12, p. 3585, doi. 10.3390/cells10123585
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- Article
Breast cancer subtype predictors revisited: from consensus to concordance?
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- BMC Medical Genomics, 2016, v. 9, p. 1, doi. 10.1186/s12920-016-0185-6
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- Article
PLIS: A metabolomic response monitor to a lifestyle intervention study in older adults.
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- FASEB Journal, 2022, v. 36, n. 11, p. 1, doi. 10.1096/fj.202201037R
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- Article
A data‐driven methodology reveals novel myofiber clusters in older human muscles.
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- FASEB Journal, 2020, v. 34, n. 4, p. 5525, doi. 10.1096/fj.201902350R
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- Article
Gene therapy: Is IL2RG oncogenic in T-cell development?
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- Nature, 2006, v. 443, n. 7109, p. E5, doi. 10.1038/nature05218
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- Article
Gene therapy: Is IL2RG oncogenic in T-cell development?: X-SCID transgene leukaemogenicity (reply).
- Published in:
- Nature, 2006, v. 443, n. 7109, p. E6, doi. 10.1038/nature05220
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- Publication type:
- Article
Longitudinal Dynamics of Human B-Cell Response at the Single-Cell Level in Response to Tdap Vaccination.
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- Vaccines, 2021, v. 9, n. 11, p. 1352, doi. 10.3390/vaccines9111352
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- Article
Genome-wide association study of frontotemporal dementia identifies a C9ORF72 haplotype with a median of 12-G4C2 repeats that predisposes to pathological repeat expansions.
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- Translational Psychiatry, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41398-021-01577-3
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- Article
Author Correction: Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics.
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- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-35518-w
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- Article
Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types.
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- Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01689-9
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- Article
RUBIC identifies driver genes by detecting recurrent DNA copy number breaks.
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- Nature Communications, 2016, v. 7, n. 7, p. 12159, doi. 10.1038/ncomms12159
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- Article
A comparison of automatic cell identification methods for single-cell RNA sequencing data.
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- Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1795-z
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- Article
Pooling breast cancer datasets has a synergetic effect on classification performance and improves signature stability.
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- BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-375
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- Publication type:
- Article
An integrated approach of gene expression and DNA-methylation profiles of WNT signaling genes uncovers novel prognostic markers in Acute Myeloid Leukemia.
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- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S4-S4.3d
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- Article
SPiCE: a web-based tool for sequence-based protein classification and exploration.
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- BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-93
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- Article
HAT: Hypergeometric Analysis of Tiling-arrays with application to promoter-GeneChip data.
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- BMC Bioinformatics, 2010, v. 11, p. 275, doi. 10.1186/1471-2105-11-275
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- Article
Delineation of amplification, hybridization andlocation effects in microarray data yieldsbetter-quality normalization.
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- BMC Bioinformatics, 2010, v. 11, p. 156, doi. 10.1186/1471-2105-11-156
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- Article
Comparing methods for fetal fraction determination and quality control of NIPT samples.
- Published in:
- 2017
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- Publication type:
- journal article
Calculating the fetal fraction for noninvasive prenatal testing based on genome-wide nucleosome profiles.
- Published in:
- 2016
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- Publication type:
- journal article
Cover Image, Volume 36, Issue 7.
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- Prenatal Diagnosis, 2016, v. 36, n. 7, p. i, doi. 10.1002/pd.4738
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- Article
A transcriptomic based deconvolution framework for assessing differentiation stages and drug responses of AML.
- Published in:
- NPJ Precision Oncology, 2024, v. 8, n. 1, p. 1, doi. 10.1038/s41698-024-00596-9
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- Article
Automatic Gene Function Prediction in the 2020's.
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- Genes, 2020, v. 11, n. 11, p. 1264, doi. 10.3390/genes11111264
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- Article
An expression profile for diagnosis of lymph node metastases from primary head and neck squamous cell carcinomas.
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- Nature Genetics, 2005, v. 37, n. 2, p. 182, doi. 10.1038/ng1502
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- Article
PROTEIN COMPLEX PREDICTION USING AN INTEGRATIVE BIOINFORMATICS APPROACH.
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- Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 4, p. 839, doi. 10.1142/S0219720007002953
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- Article
Pattern recognition in bioinformatics.
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- Briefings in Bioinformatics, 2013, v. 14, n. 5, p. 633, doi. 10.1093/bib/bbt020
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- Article
CBA: Cluster-Guided Batch Alignment for Single Cell RNA-seq.
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- Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.644211
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- Article
Benchmarking variational AutoEncoders on cancer transcriptomics data.
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- PLoS ONE, 2023, v. 18, n. 10, p. 1, doi. 10.1371/journal.pone.0292126
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- Publication type:
- Article
Analysis of mass spectrometry data using sub-spectra.
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- BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S1-S51
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- Article
Knowledge driven decomposition of tumor expression profiles.
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- BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S1-S20
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- Publication type:
- Article
Comparison of normalisation methods for surface-enhanced laser desorption and ionisation (SELDI) time-of-flight (TOF) mass spectrometry data.
- Published in:
- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-88
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- Publication type:
- Article
SIRAC: Supervised Identification of Regions of Aberration in aCGH datasets.
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- BMC Bioinformatics, 2007, v. 8, p. 422, doi. 10.1186/1471-2105-8-422
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- Article
Unbiased Quantitative Models of Protein Translation Derived from Ribosome Profiling Data.
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- PLoS Computational Biology, 2015, v. 11, n. 8, p. 1, doi. 10.1371/journal.pcbi.1004336
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- Article
A survey of functional genomic variation in domesticated chickens.
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- Genetics Selection Evolution, 2018, v. 50, n. 1, p. N.PAG, doi. 10.1186/s12711-018-0390-1
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- Article
Determining epitope specificity of T-cell receptors with transformers.
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- Bioinformatics, 2023, v. 39, n. 11, p. 1, doi. 10.1093/bioinformatics/btad632
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- Article
Cell type matching across species using protein embeddings and transfer learning.
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- Bioinformatics, 2023, v. 39, p. i404, doi. 10.1093/bioinformatics/btad248
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- Publication type:
- Article
Unsupervised protein embeddings outperform hand-crafted sequence and structure features at predicting molecular function.
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- Bioinformatics, 2021, v. 37, n. 2, p. 162, doi. 10.1093/bioinformatics/btaa701
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- Article
SCHNEL: scalable clustering of high dimensional single-cell data.
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- Bioinformatics, 2020, v. 36, p. i849, doi. 10.1093/bioinformatics/btaa816
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- Article
ImSpectR: R package to quantify immune repertoire diversity in spectratype and repertoire sequencing data.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1930, doi. 10.1093/bioinformatics/btz804
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- Article
Metric learning on expression data for gene function prediction.
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- Bioinformatics, 2020, v. 36, n. 4, p. 1182, doi. 10.1093/bioinformatics/btz731
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- Article
CyTOFmerge: integrating mass cytometry data across multiple panels.
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- Bioinformatics, 2019, v. 35, n. 20, p. 4063, doi. 10.1093/bioinformatics/btz180
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- Publication type:
- Article
PRECISE: a domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors.
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- Bioinformatics, 2019, v. 35, n. 14, p. i510, doi. 10.1093/bioinformatics/btz372
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- Publication type:
- Article
Improving protein function prediction using protein sequence and GO-term similarities.
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- Bioinformatics, 2019, v. 35, n. 7, p. 1116, doi. 10.1093/bioinformatics/bty751
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- Publication type:
- Article
Hierarchical progressive learning of cell identities in single-cell data.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23196-8
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- Publication type:
- Article
Analysis of Tumor Heterogeneity and Cancer Gene Networks Using Deep Sequencing of MMTV-Induced Mouse Mammary Tumors
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- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0062113
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- Article
Exploring Sequence Characteristics Related to High-Level Production of Secreted Proteins in Aspergillus niger.
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- PLoS ONE, 2012, v. 7, n. 10, p. 1, doi. 10.1371/journal.pone.0045869
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- Publication type:
- Article
Integration of Clinical and Gene Expression Data Has a Synergetic Effect on Predicting Breast Cancer Outcome.
- Published in:
- PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0040358
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- Article
Understanding Regulation of Metabolism through Feasibility Analysis.
- Published in:
- PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0039396
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- Article