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Survey of Network-Based Approaches to Research of Cardiovascular Diseases.
- Published in:
- BioMed Research International, 2014, v. 2014, p. 1, doi. 10.1155/2014/527029
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- Publication type:
- Article
Revealing the Hidden Language of Complex Networks.
- Published in:
- Scientific Reports, 2014, p. 1, doi. 10.1038/srep04547
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- Publication type:
- Article
Discovering disease-disease associations by fusing systems-level molecular data.
- Published in:
- Scientific Reports, 2013, p. 1, doi. 10.1038/srep03202
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- Publication type:
- Article
Four algorithms to solve symmetric multi-type non-negative matrix tri-factorization problem.
- Published in:
- Journal of Global Optimization, 2022, v. 82, n. 2, p. 283, doi. 10.1007/s10898-021-01074-3
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- Publication type:
- Article
Graphlet eigencentralities capture novel central roles of genes in pathways.
- Published in:
- PLoS ONE, 2022, v. 17, n. 1, p. 1, doi. 10.1371/journal.pone.0261676
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- Publication type:
- Article
Integrated Data Analysis Uncovers New COVID-19 Related Genes and Potential Drug Re-Purposing Candidates.
- Published in:
- International Journal of Molecular Sciences, 2023, v. 24, n. 2, p. 1431, doi. 10.3390/ijms24021431
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- Publication type:
- Article
Predicting disease associations via biological network analysis.
- Published in:
- BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-304
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- Publication type:
- Article
Minimum Average Time Broadcast Graphs.
- Published in:
- Parallel Processing Letters, 1998, v. 8, n. 2, p. 139, doi. 10.1142/S012962649800016X
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- Publication type:
- Article
Author Correction: Towards a data-integrated cell.
- Published in:
- 2019
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- Publication type:
- Correction Notice
Towards a data-integrated cell.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-08797-8
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- Publication type:
- Article
The integrated disease network.
- Published in:
- Integrative Biology, 2014, v. 6, n. 11, p. 1069, doi. 10.1039/c4ib00122b
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- Publication type:
- Article
Network wiring of pleiotropic kinases yields insight into protective role of diabetes on aneurysm.
- Published in:
- Integrative Biology, 2014, v. 6, n. 11, p. 1049, doi. 10.1039/c4ib00125g
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- Publication type:
- Article
C-GRAAL: Common-neighbors-based global GRAph ALignment of biological networks.
- Published in:
- Integrative Biology, 2012, v. 4, n. 7, p. 734, doi. 10.1039/c2ib00140c
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- Publication type:
- Article
A phenotype driven integrative framework uncovers molecular mechanisms of a rare hereditary thrombophilia.
- Published in:
- PLoS ONE, 2023, v. 17, n. 4, p. 1, doi. 10.1371/journal.pone.0284084
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- Publication type:
- Article
Big Data to Knowledge Analytics Reveals the Zika Virus Epidemic as Only One of Multiple Factors Contributing to a Year-Over-Year 28-Fold Increase in Microcephaly Incidence.
- Published in:
- International Journal of Environmental Research & Public Health, 2022, v. 19, n. 15, p. 9051, doi. 10.3390/ijerph19159051
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- Publication type:
- Article
GraphCrunch: A tool for large network analyses.
- Published in:
- 2008
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- Publication type:
- Product Review
Geometric De-noising of Protein-Protein Interaction Networks.
- Published in:
- PLoS Computational Biology, 2009, v. 5, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000454
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- Publication type:
- Article
Not All Scale-Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Evolution.
- Published in:
- PLoS Computational Biology, 2007, v. 3, n. 7, p. e118, doi. 10.1371/journal.pcbi.0030118
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- Publication type:
- Article
A functional analysis of omic network embedding spaces reveals key altered functions in cancer.
- Published in:
- Bioinformatics, 2023, v. 39, n. 5, p. 1, doi. 10.1093/bioinformatics/btad281
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- Publication type:
- Article
Identifying cellular cancer mechanisms through pathway-driven data integration.
- Published in:
- Bioinformatics, 2022, v. 38, n. 18, p. 4344, doi. 10.1093/bioinformatics/btac493
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- Publication type:
- Article
Probabilistic graphlets capture biological function in probabilistic molecular networks.
- Published in:
- Bioinformatics, 2020, v. 36, p. i804, doi. 10.1093/bioinformatics/btaa812
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- Publication type:
- Article
Graphlet Laplacians for topology-function and topology-disease relationships.
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- Bioinformatics, 2019, v. 35, n. 24, p. 5226, doi. 10.1093/bioinformatics/btz455
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- Publication type:
- Article
Functional geometry of protein interactomes.
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- Bioinformatics, 2019, v. 35, n. 19, p. 3727, doi. 10.1093/bioinformatics/btz146
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- Publication type:
- Article
Higher-order molecular organization as a source of biological function.
- Published in:
- Bioinformatics, 2018, v. 34, n. 17, p. i944, doi. 10.1093/bioinformatics/bty570
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- Publication type:
- Article
Network Topology Reveals Key Cardiovascular Disease Genes.
- Published in:
- PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0071537
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- Publication type:
- Article
Dominating Biological Networks.
- Published in:
- PLoS ONE, 2011, v. 6, n. 8, p. 1, doi. 10.1371/journal.pone.0023016
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- Publication type:
- Article
Optimized Null Model for Protein Structure Networks.
- Published in:
- PLoS ONE, 2009, v. 4, n. 6, p. 1, doi. 10.1371/journal.pone.0005967
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- Publication type:
- Article
Integrative methods for analyzing big data in precision medicine.
- Published in:
- Proteomics, 2016, v. 16, n. 5, p. 741, doi. 10.1002/pmic.201500396
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- Publication type:
- Article
Graphlet-based Characterization of Directed Networks.
- Published in:
- Scientific Reports, 2016, p. 35098, doi. 10.1038/srep35098
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- Publication type:
- Article
Network neighbors of viral targets and differentially expressed genes in COVID-19 are drug target candidates.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-98289-x
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- Publication type:
- Article
Rebuttal to the Letter to the Editor in response to the paper: proper evaluation of alignment-free network comparison methods.
- Published in:
- 2017
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- Publication type:
- Letter to the Editor
Fuse: multiple network alignment via data fusion.
- Published in:
- Bioinformatics, 2016, v. 32, n. 8, p. 1195, doi. 10.1093/bioinformatics/btv731
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- Publication type:
- Article
Proper evaluation of alignment-free network comparison methods.
- Published in:
- Bioinformatics, 2015, v. 31, n. 16, p. 2697, doi. 10.1093/bioinformatics/btv170
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- Publication type:
- Article
Systems biology: L-GRAAL: Lagrangian graphlet-based network aligner.
- Published in:
- Bioinformatics, 2015, v. 31, n. 13, p. 2182, doi. 10.1093/bioinformatics/btv130
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- Publication type:
- Article
Topology-function conservation in protein-protein interaction networks.
- Published in:
- 2015
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- Publication type:
- Case Study
Integration of molecular network data reconstructs Gene Ontology.
- Published in:
- Bioinformatics, 2014, v. 30, n. 17, p. i594
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- Publication type:
- Article
GR-Align: fast and flexible alignment of protein 3D structures using graphlet degree similarity.
- Published in:
- Bioinformatics, 2014, v. 30, n. 9, p. 1259, doi. 10.1093/bioinformatics/btu020
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- Publication type:
- Article
Graphlet-based measures are suitable for biological network comparison.
- Published in:
- Bioinformatics, 2013, v. 29, n. 4, p. 483, doi. 10.1093/bioinformatics/bts729
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- Publication type:
- Article
Integrative network alignment reveals large regions of global network similarity in yeast and human.
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- Bioinformatics, 2011, v. 27, n. 10, p. 1390, doi. 10.1093/bioinformatics/btr127
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- Publication type:
- Article
Biological network comparison using graphlet degree distribution.
- Published in:
- 2010
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- Publication type:
- Correction notice
Biological network comparison using graphlet degree distribution.
- Published in:
- Bioinformatics, 2007, v. 23, n. 2, p. e177, doi. 10.1093/bioinformatics/btl301
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- Publication type:
- Article
Unveiling new disease, pathway, and gene associations via multi-scale neural network.
- Published in:
- PLoS ONE, 2020, v. 15, n. 4, p. 1, doi. 10.1371/journal.pone.0231059
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- Publication type:
- Article
Optimal Network Alignment with Graphlet Degree Vectors.
- Published in:
- Cancer Informatics, 2010, n. 8, p. 121
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- Publication type:
- Article
Uncovering Biological Network Function via Graphlet Degree Signatures.
- Published in:
- Cancer Informatics, 2008, n. 6, p. 257
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- Publication type:
- Article
Critical Review on Zeolite Clinoptilolite Safety and Medical Applications in vivo.
- Published in:
- Frontiers in Pharmacology, 2018, p. N.PAG, doi. 10.3389/fphar.2018.01350
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- Publication type:
- Article
Multi-omics integration of scRNA-seq time series data predicts new intervention points for Parkinson's disease.
- Published in:
- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-61844-3
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- Publication type:
- Article
Protein-protein interactions: Making sense of networks via graph-theoretic modeling.
- Published in:
- BioEssays, 2011, v. 33, n. 2, p. 115, doi. 10.1002/bies.201000044
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- Publication type:
- Article
Biological function through network topology: a survey of the human diseasome.
- Published in:
- Briefings in Functional Genomics, 2012, v. 11, n. 6, p. 522, doi. 10.1093/bfgp/els037
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- Publication type:
- Article