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Novel genetic risk variants for pediatric celiac disease.
Published in:
Human Genomics, 2016, v. 10, p. 1, doi. 10.1186/s40246-016-0091-1
By:
- Balasopoulou, Angeliki;
- Stanković, Biljana;
- Panagiotara, Angeliki;
- Nikčevic, Gordana;
- Peters, Brock A.;
- John, Anne;
- Mendrinou, Effrosyni;
- Stratopoulos, Apostolos;
- Legaki, Aigli Ioanna;
- Stathakopoulou, Vasiliki;
- Tsolia, Aristoniki;
- Govaris, Nikolaos;
- Govari, Sofia;
- Zagoriti, Zoi;
- Poulas, Konstantinos;
- Kanariou, Maria;
- Constantinidou, Nikki;
- Krini, Maro;
- Spanou, Kleopatra;
- Radlovic, Nedeljko
Publication type:
Article
Identification of cancer predisposition variants in apparently healthy individuals using a next-generation sequencing-based family genomics approach.
Published in:
Human Genomics, 2015, v. 9, n. 1, p. 1, doi. 10.1186/s40246-015-0034-2
By:
- Karageorgos, Ioannis;
- Mizzi, Clint;
- Giannopoulou, Efstathia;
- Pavlidis, Cristiana;
- Peters, Brock A.;
- Zagoriti, Zoi;
- Stenson, Peter D.;
- Mitropoulos, Konstantinos;
- Borg, Joseph;
- Kalofonos, Haralabos P.;
- Drmanac, Radoje;
- Stubbs, Andrew;
- van der Spek, Peter;
- Cooper, David N.;
- Katsila, Theodora;
- Patrinos, George P.
Publication type:
Article
Contribution of bone marrow-derived endothelial cells to human tumor vasculature.
Published in:
Nature Medicine, 2005, v. 11, n. 3, p. 261, doi. 10.1038/nm1200
By:
- Peters, Brock A.;
- Diaz Jr., Luis A.;
- Polyak, Kornelia;
- Meszler, Leslie;
- Romans, Kathy;
- Guinan, Eva C.;
- Antin, Joseph H.;
- Myerson, David;
- Hamilton, Stanley R.;
- Vogelstein, Bert;
- Kinzler, Kenneth W.;
- Lengauer, Christoph
Publication type:
Article
Truncating mutations of MAGEL2 cause Prader-Willi phenotypes and autism.
Published in:
Nature Genetics, 2013, v. 45, n. 11, p. 1405, doi. 10.1038/ng.2776
By:
- Schaaf, Christian P;
- Gonzalez-Garay, Manuel L;
- Xia, Fan;
- Potocki, Lorraine;
- Gripp, Karen W;
- Zhang, Baili;
- Peters, Brock A;
- McElwain, Mark A;
- Drmanac, Radoje;
- Beaudet, Arthur L;
- Caskey, C Thomas;
- Yang, Yaping
Publication type:
Article
Highly efficient somatic-mutation identification using Escherichia coli mismatch-repair detection.
Published in:
Nature Methods, 2007, v. 4, n. 9, p. 713, doi. 10.1038/nmeth1081
By:
- Peters, Brock A.;
- Zhengyan Kan;
- Sebisanovic, Dragan;
- Pujara, Kanan;
- Zhiyong Wang;
- Hong, Peter;
- Chow, Bernard;
- Stinson, Jeremy;
- Carlton, Victoria E. H.;
- Pham, Thinh Q.;
- Stern, Howard;
- Waring, Paul;
- Hillan, Kenneth J.;
- Eberhard, David A.;
- de Sauvage, Frederic;
- Jianbiao Zheng;
- Faham, Malek;
- Seshagiri, Somasekar
Publication type:
Article
Transcriptome PETs: A genome's best friends.
Published in:
Nature Methods, 2005, v. 2, n. 2, p. 93, doi. 10.1038/nmeth0205-93
By:
- Peters, Brock A.;
- Velculescu, Victor E.
Publication type:
Article
Accurate haplotype-resolved assembly reveals the origin of structural variants for human trios.
Published in:
Bioinformatics, 2021, v. 37, n. 15, p. 2095, doi. 10.1093/bioinformatics/btab068
By:
- Xu, Mengyang;
- Guo, Lidong;
- Du, Xiao;
- Li, Lei;
- Peters, Brock A;
- Deng, Li;
- Wang, Ou;
- Chen, Fang;
- Wang, Jun;
- Jiang, Zhesheng;
- Han, Jinglin;
- Ni, Ming;
- Yang, Huanming;
- Xu, Xun;
- Liu, Xin;
- Huang, Jie;
- Fan, Guangyi
Publication type:
Article
Comparison of long-read methods for sequencing and assembly of a plant genome.
Published in:
GigaScience, 2020, v. 9, n. 12, p. 1, doi. 10.1093/gigascience/giaa146
By:
- Murigneux, Valentine;
- Rai, Subash Kumar;
- Furtado, Agnelo;
- Bruxner, Timothy J C;
- Tian, Wei;
- Harliwong, Ivon;
- Wei, Hanmin;
- Yang, Bicheng;
- Ye, Qianyu;
- Anderson, Ellis;
- Mao, Qing;
- Drmanac, Radoje;
- Wang, Ou;
- Peters, Brock A;
- Xu, Mengyang;
- Wu, Pei;
- Topp, Bruce;
- Coin, Lachlan J M;
- Henry, Robert J
Publication type:
Article
TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads.
Published in:
GigaScience, 2020, v. 9, n. 9, p. 1, doi. 10.1093/gigascience/giaa094
By:
- Xu, Mengyang;
- Guo, Lidong;
- Gu, Shengqiang;
- Wang, Ou;
- Zhang, Rui;
- Peters, Brock A;
- Fan, Guangyi;
- Liu, Xin;
- Xu, Xun;
- Deng, Li;
- Zhang, Yongwei
Publication type:
Article
The whole genome sequences and experimentally phased haplotypes of over 100 personal genomes.
Published in:
GigaScience, 2016, v. 5, p. 1, doi. 10.1186/s13742-016-0148-z
By:
- Qing Mao;
- Ciotlos, Serban;
- Yu Zhang, Rebecca;
- Ball, Madeleine P.;
- Chin, Robert;
- Carnevali, Paolo;
- Barua, Nina;
- Nguyen, Staci;
- Agarwal, Misha R.;
- Clegg, Tom;
- Connelly, Abram;
- Vandewege, Ward;
- Wait Zaranek, Alexander;
- Estep, Preston W.;
- Church, George M.;
- Drmanac, Radoje;
- Peters, Brock A.
Publication type:
Article
Whole genome sequence analysis of BT- 474 using complete Genomics' standard and long fragment read technologies.
Published in:
GigaScience, 2016, v. 5, p. 1, doi. 10.1186/s13742-016-0113-x
By:
- Ciotlos, Serban;
- Qing Mao;
- Rebecca Yu Zhang;
- Zhenyu Li;
- Chin, Robert;
- Gulbahce, Natali;
- Jia Liu, Sophie;
- Drmanac, Radoje;
- Peters, Brock A.
Publication type:
Article
Co-barcoded sequence reads from long DNA fragments: a cost-effective solution for "perfect genome" sequencing.
Published in:
Frontiers in Genetics, 2015, v. 5, p. 1, doi. 10.3389/fgene.2014.00466
By:
- Peters, Brock A.;
- Liu, Jia;
- Drmanac, Radoje;
- Crowley, Michael R.
Publication type:
Article
Diverse somatic mutation patterns and pathway alterations in human cancers.
Published in:
Nature, 2010, v. 466, n. 7308, p. 869, doi. 10.1038/nature09208
By:
- Zhengyan Kan;
- Jaiswal, Bijay S.;
- Stinson, Jeremy;
- Janakiraman, Vasantharajan;
- Bhatt, Deepali;
- Stern, Howard M.;
- Peng Yue;
- Haverty, Peter M.;
- Bourgon, Richard;
- Jianbiao Zheng;
- Moorhead, Martin;
- Chaudhuri, Subhra;
- Tomsho, Lynn P.;
- Peters, Brock A.;
- Pujara, Kanan;
- Cordes, Shaun;
- Davis, David P.;
- Carlton, Victoria E. H.;
- Wenlin Yuan;
- Li Li
Publication type:
Article
An ATAC-seq atlas of chromatin accessibility in mouse tissues.
Published in:
Scientific Data, 2019, v. 6, n. 1, p. N.PAG, doi. 10.1038/s41597-019-0071-0
By:
- Liu, Chuanyu;
- Wang, Mingyue;
- Wei, Xiaoyu;
- Wu, Liang;
- Xu, Jiangshan;
- Dai, Xi;
- Xia, Jun;
- Cheng, Mengnan;
- Yuan, Yue;
- Zhang, Pengfan;
- Li, Jiguang;
- Feng, Taiqing;
- Chen, Ao;
- Zhang, Wenwei;
- Chen, Fang;
- Shang, Zhouchun;
- Zhang, Xiuqing;
- Peters, Brock A.;
- Liu, Longqi
Publication type:
Article
Assembly and analysis of the genome of Notholithocarpus densiflorus.
Published in:
G3: Genes | Genomes | Genetics, 2024, v. 14, n. 5, p. 1, doi. 10.1093/g3journal/jkae043
By:
- Cai, Ying;
- Anderson, Ellis;
- Xue, Wen;
- Wong, Sylvia;
- Cui, Luman;
- Cheng, Xiaofang;
- Wang, Ou;
- Mao, Qing;
- Liu, Sophie Jia;
- Davis, John T;
- Magalang, Paulo R;
- Schmidt, Douglas;
- Kasuga, Takao;
- Garbelotto, Matteo;
- Drmanac, Radoje;
- Kua, Chai-Shian;
- Cannon, Charles;
- Maloof, Julin N;
- Peters, Brock A
Publication type:
Article
Deep RNA sequencing analysis of readthrough gene fusions in human prostate adenocarcinoma and reference samples.
Published in:
BMC Medical Genomics, 2011, v. 4, n. 1, p. 11, doi. 10.1186/1755-8794-4-11
By:
- Serban Nacu;
- Wenlin Yuan;
- Zhengyan Kan;
- Bhatt, Deepali;
- Rivers, Celina Sanchez;
- Stinson, Jeremy;
- Peters, Brock A.;
- Modrusan, Zora;
- Jung, Kenneth;
- Seshagiri, Somasekar;
- Wu, Thomas D.
Publication type:
Article
Advanced Whole-Genome Sequencing and Analysis of Fetal Genomes from Amniotic Fluid.
Published in:
Clinical Chemistry, 2018, v. 64, n. 4, p. 715, doi. 10.1373/clinchem.2017.281220
By:
- Qing Mao;
- Chin, Robert;
- Weiwei Xie;
- Yuqing Deng;
- Wenwei Zhang;
- Huixin Xu;
- Yu Zhang, Rebecca;
- Quan Shi;
- Peters, Erin E.;
- Gulbahce, Natali;
- Zhenyu Li;
- Fang Chen;
- Drmanac, Radoje;
- Peters, Brock A.
Publication type:
Article
Accurate Whole Genome Sequencing as the Ultimate Genetic Test.
Published in:
Clinical Chemistry, 2015, v. 61, n. 1, p. 305, doi. 10.1373/clinchem.2014.224907
By:
- Drmanac, Radoje;
- Peters, Brock A.;
- Church, George M.;
- Reid, Clifford A.;
- Xun Xu
Publication type:
Article
Pharmacologic and Toxicologic Evaluation of C. novyi-NT Spores.
Published in:
Toxicological Sciences, 2005, v. 88, n. 2, p. 562, doi. 10.1093/toxsci/kfi316
By:
- Diaz Jr., Luis A.;
- Ian Cheong;
- Foss, Catherine A.;
- Xiaosong Zhang;
- Peters, Brock A.;
- Agrawal, Nishant;
- Bettegowda, Chetan;
- Karim, Baktiar;
- Guosheng Liu;
- Khan, Khalid;
- Xin Huang;
- Kohli, Manu;
- Dang, Long H.;
- Hwang, Paul;
- Vogelstein, Ahava;
- Garrett-Mayer, Elizabeth;
- Kobrin, Barry;
- Pomper, Martin;
- Shibin Zhou;
- Kinzler, Kenneth W.
Publication type:
Article
On the ubiquity of electromagnetic-duality rotations in 4D, 𝒩=1 holoraumy tensors for on-shell 4D supermultiplets.
Published in:
International Journal of Modern Physics A: Particles & Fields; Gravitation; Cosmology; Nuclear Physics, 2020, v. 35, n. 1, p. N.PAG, doi. 10.1142/S0217751X20500086
By:
- Gates, S. James;
- Lay, Daniel;
- Hazel Mak, S.-N.;
- Peters, Brock;
- Ramakrishnan, Aravind;
- Stiffler, Kory;
- Wimpee, Zachary;
- Xiao, Xiao;
- Yuan, Yifan;
- Zhang, Jinjie;
- Zhou, Peter V.
Publication type:
Article
Accurate whole-genome sequencing and haplotyping from 10 to 20 human cells.
Published in:
Nature, 2012, v. 487, n. 7406, p. 190, doi. 10.1038/nature11236
By:
- Peters, Brock A.;
- Kermani, Bahram G.;
- Sparks, Andrew B.;
- Alferov, Oleg;
- Hong, Peter;
- Alexeev, Andrei;
- Jiang, Yuan;
- Dahl, Fredrik;
- Tang, Y. Tom;
- Haas, Juergen;
- Robasky, Kimberly;
- Zaranek, Alexander Wait;
- Lee, Je-Hyuk;
- Ball, Madeleine Price;
- Peterson, Joseph E.;
- Perazich, Helena;
- Yeung, George;
- Liu, Jia;
- Chen, Linsu;
- Kennemer, Michael I.
Publication type:
Article
IterCluster: a barcode clustering algorithm for long fragment read analysis.
Published in:
PeerJ, 2020, p. 1, doi. 10.7717/peerj.8431
By:
- Jiancong Weng;
- Tian Chen;
- Yinlong Xie;
- Xun Xu;
- Gengyun Zhang;
- Peters, Brock A.;
- Drmanac, Radoje
Publication type:
Article
Significant abundance of cis configurations of coding variants in diploid human genomes.
Published in:
Nucleic Acids Research, 2019, v. 47, n. 6, p. 2981, doi. 10.1093/nar/gkz031
By:
- Hoehe, Margret R;
- Herwig, Ralf;
- Mao, Qing;
- Peters, Brock A;
- Drmanac, Radoje;
- Church, George M;
- Huebsch, Thomas
Publication type:
Article
3′ Branch ligation: a novel method to ligate non-complementary DNA to recessed or internal 3′OH ends in DNA or RNA.
Published in:
DNA Research, 2019, v. 26, n. 1, p. 45, doi. 10.1093/dnares/dsy037
By:
- Wang, Lin;
- Xi, Yang;
- Zhang, Wenwei;
- Wang, Weimao;
- Shen, Hanjie;
- Wang, Xiaojue;
- Zhao, Xia;
- Alexeev, Andrei;
- Peters, Brock A;
- Albert, Alayna;
- Xu, Xu;
- Ren, Han;
- Wang, Ou;
- Kirkconnell, Killeen;
- Perazich, Helena;
- Clark, Sonya;
- Hurowitz, Evan;
- Chen, Ao;
- Xu, Xun;
- Drmanac, Radoje
Publication type:
Article

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