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Molecular analysis of sarcoidosis tissues for mycobacterium species DNA.
Published in:
2002
By:
- Drake, Wonder Puryear;
- Zhiheng Pei;
- Pride, David T.;
- Collins, Robert D.;
- Cover, Timothy L.;
- Blaser, Martin J.;
- Pei, Zhiheng
Publication type:
journal article
Erratum to: The first microbial environment of infants born by C-section: the operating room microbes.
Published in:
Microbiome, 2016, v. 4, p. 1, doi. 10.1186/s40168-016-0148-3
By:
- Hakdong Shin;
- Zhiheng Pei;
- Martinez II, Keith A.;
- Rivera-Vinas, Juana I.;
- Mendez, Keimari;
- Cavallin, Humberto;
- Dominguez-Bello, Maria G.
Publication type:
Article
The first microbial environment of infants born by C-section: the operating room microbes.
Published in:
Microbiome, 2015, v. 3, p. 1, doi. 10.1186/s40168-015-0126-1
By:
- Hakdong Shin;
- Zhiheng Pei;
- Martinez II, Keith A.;
- Rivera-Vinas, Juana I.;
- Mendez, Keimari;
- Cavallin, Humberto;
- Dominguez-Bello, Maria G.
Publication type:
Article
Pathogenesis of Campylobacter fetus Infections: Critical Role of High-Molecular- Weight S-Layer Proteins in Virulence.
Published in:
Journal of Infectious Diseases, 1993, v. 167, n. 2, p. 372, doi. 10.1093/infdis/167.2.372
By:
- Blaser, Martin J.;
- Pei, Zhiheng
Publication type:
Article
MGS-Fast: Metagenomic shotgun data fast annotation using microbial gene catalogs.
Published in:
GigaScience, 2019, v. 8, n. 4, p. N.PAG, doi. 10.1093/gigascience/giz020
By:
- Brown, Stuart M;
- Chen, Hao;
- Hao, Yuhan;
- Laungani, Bobby P;
- Ali, Thahmina A;
- Dong, Changsu;
- Lijeron, Carlos;
- Kim, Baekdoo;
- Wultsch, Claudia;
- Pei, Zhiheng;
- Krampis, Konstantinos
Publication type:
Article
Sex, Body Mass Index, and Dietary Fiber Intake Influence the Human Gut Microbiome.
Published in:
PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0124599
By:
- Dominianni, Christine;
- Sinha, Rashmi;
- Goedert, James J.;
- Pei, Zhiheng;
- Yang, Liying;
- Hayes, Richard B.;
- Ahn, Jiyoung
Publication type:
Article
Diversified Microbiota of Meconium Is Affected by Maternal Diabetes Status.
Published in:
PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0078257
By:
- Hu, Jianzhong;
- Nomura, Yoko;
- Bashir, Ali;
- Fernandez-Hernandez, Heriberto;
- Itzkowitz, Steven;
- Pei, Zhiheng;
- Stone, Joanne;
- Loudon, Holly;
- Peter, Inga
Publication type:
Article
Association between Selected Oral Pathogens and Gastric Precancerous Lesions.
Published in:
PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0051604
By:
- Salazar, Christian R.;
- Jinghua Sun;
- Yihong Li;
- Francois, Fritz;
- Corby, Patricia;
- Perez-Perez, Guillermo;
- Dasanayake, Ananda;
- Zhiheng Pei;
- Yu Chen
Publication type:
Article
Oral Microbiome Profiles: 16S rRNA Pyrosequencing and Microarray Assay Comparison.
Published in:
PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0022788
By:
- Jiyoung Ahn;
- Liying Yang;
- Paster, Bruce J.;
- Ganly, Ian;
- Morris, Luc;
- Pei, Zhiheng;
- Hayes, Richard B.
Publication type:
Article
Diversity of 23S rRNA Genes within Individual Prokaryotic Genomes.
Published in:
PLoS ONE, 2009, v. 4, n. 5, p. 1, doi. 10.1371/journal.pone.0005437
By:
- Pei, Anna;
- Nossa, Carlos W.;
- Chokshi, Pooja;
- Blaser, Martin J.;
- Liying Yang;
- Rosmarin, David M.;
- Zhiheng Pei
Publication type:
Article
Substantial Alterations of the Cutaneous Bacterial Biota in Psoriatic Lesions.
Published in:
PLoS ONE, 2008, v. 3, n. 7, p. 1, doi. 10.1371/journal.pone.0002719
By:
- Gao, Zhan;
- Chi-hong Tseng;
- Strober, Bruce E.;
- Zhiheng Pei;
- Blaser, Martin J.
Publication type:
Article
Leptin and ghrelin in relation to Helicobacter pylori status in adult males.
Published in:
2008
By:
- Roper, Jatin;
- Francois, Fritz;
- Shue, Peter L;
- Mourad, Michelle S;
- Pei, Zhiheng;
- Olivares de Perez, Asalia Z;
- Perez-Perez, Guillermo I;
- Tseng, Chi-Hong;
- Blaser, Martin J
Publication type:
journal article
Oral Microbiome in Nonsmoker Patients with Oral Cavity Squamous Cell Carcinoma, Defined by Metagenomic Shotgun Sequencing.
Published in:
Cancers, 2022, v. 14, n. 24, p. 6096, doi. 10.3390/cancers14246096
By:
- Ganly, Ian;
- Hao, Yuhan;
- Rosenthal, Matthew;
- Wang, Hongmei;
- Migliacci, Jocelyn;
- Huang, Bin;
- Katabi, Nora;
- Brown, Stuart;
- Tang, Yi-Wei;
- Pei, Zhiheng;
- Yang, Liying
Publication type:
Article
The Association Between Smoking and Gut Microbiome in Bangladesh.
Published in:
2020
By:
- Nolan-Kenney, Rachel;
- Wu, Fen;
- Hu, Jiyuan;
- Yang, Liying;
- Kelly, Dervla;
- Li, Huilin;
- Jasmine, Farzana;
- Kibriya, Muhammad G;
- Parvez, Faruque;
- Shaheen, Ishrat;
- Sarwar, Golam;
- Ahmed, Alauddin;
- Eunus, Mahbub;
- Islam, Tariqul;
- Pei, Zhiheng;
- Ahsan, Habibul;
- Chen, Yu
Publication type:
journal article
Distinct function of androgen receptor coactivator ARA70α and ARA70β in mammary gland development, and in breast cancer.
Published in:
Breast Cancer Research & Treatment, 2011, v. 128, n. 2, p. 391, doi. 10.1007/s10549-010-1131-5
By:
- Wu, Xinyu;
- Chen, Fei;
- Sahin, Aysegul;
- Albarracin, Constance;
- Pei, Zhiheng;
- Zou, Xuanyi;
- Singh, Baljit;
- Xu, Ruliang;
- Daniels, Garrett;
- Li, Yirong;
- Wei, Jianjun;
- Blake, Marvin;
- Schneider, Robert;
- Cowin, Pamela;
- Lee, Peng
Publication type:
Article
Mitochondrial somatic mutations and the lack of viral genomic variation in recurrent respiratory papillomatosis.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-53148-8
By:
- Hao, Yuhan;
- Ruiz, Ryan;
- Yang, Liying;
- Neto, Antonio Galvao;
- Amin, Milan R.;
- Kelly, Dervla;
- Achlatis, Stratos;
- Roof, Scott;
- Bing, Renjie;
- Kannan, Kasthuri;
- Brown, Stuart M.;
- Pei, Zhiheng;
- Branski, Ryan C.
Publication type:
Article
Progressive dysbiosis of human orodigestive microbiota along the sequence of gastroesophageal reflux, Barrett's esophagus and esophageal adenocarcinoma.
Published in:
International Journal of Cancer, 2022, v. 151, n. 10, p. 1703, doi. 10.1002/ijc.34191
By:
- Hao, Yuhan;
- Karaoz, Ulas;
- Yang, Liying;
- Yachimski, Patrick S.;
- Tseng, Wenzhi;
- Nossa, Carlos W.;
- Ye, Weimin;
- Tseng, Mengkao;
- Poles, Michael;
- Francois, Fritz;
- Traube, Morris;
- Brown, Stuart M.;
- Chen, Yu;
- Torralba, Manolito;
- Peek, Richard M.;
- Brodie, Eoin L.;
- Pei, Zhiheng
Publication type:
Article
Prospective study of oral microbiome and gastric cancer risk among Asian, African American and European American populations.
Published in:
International Journal of Cancer, 2022, v. 150, n. 6, p. 916, doi. 10.1002/ijc.33847
By:
- Yang, Yaohua;
- Long, Jirong;
- Wang, Cong;
- Blot, William J.;
- Pei, Zhiheng;
- Shu, Xiang;
- Wu, Fen;
- Rothman, Nathaniel;
- Wu, Jie;
- Lan, Qing;
- Cai, Qiuyin;
- Zheng, Wei;
- Chen, Yu;
- Shu, Xiao‐Ou
Publication type:
Article
Intragastric Balloon Improves Steatohepatitis and Fibrosis.
Published in:
ACG Case Reports Journal, 2021, v. 8, n. 1, p. 1, doi. 10.14309/crj.0000000000000534
By:
- Lin, Elissa;
- Xiaoyan Huang;
- Zhiheng Pei;
- Gross, Jonathan;
- Popov, Violeta
Publication type:
Article
Association between oral health and gastric precancerous lesions.
Published in:
Carcinogenesis, 2012, v. 33, n. 2, p. 399, doi. 10.1093/carcin/bgr284
By:
- Salazar, Christian R.;
- Francois, Fritz;
- Li, Yihong;
- Corby, Patricia;
- Hays, Rosemary;
- Leung, Celine;
- Bedi, Sukhleen;
- Segers, Stephanie;
- Queiroz, Erica;
- Sun, Jinghua;
- Wang, Beverly;
- Ho, Hao;
- Craig, Ronald;
- Cruz, Gustavo D.;
- Blaser, Martin J.;
- Perez-Perez, Guillermo;
- Hayes, Richard B.;
- Dasanayake, Ananda;
- Pei, Zhiheng;
- Chen, Yu
Publication type:
Article
Simrank: Rapid and sensitive general-purpose k-mer search tool.
Published in:
BMC Ecology, 2011, v. 11, n. 1, p. 11, doi. 10.1186/1472-6785-11-11
By:
- DeSantis, Todd Z.;
- Keller, Keith;
- Karaoz, Ulas;
- Alekseyenko, Alexander V.;
- Singh, Navjeet N. S.;
- Brodie, Eoin L.;
- Zhiheng Pei;
- Andersen, Gary L.;
- Larsen, Niels
Publication type:
Article
Gut Microbiota, Fusobacteria, and Colorectal Cancer.
Published in:
Diseases, 2018, v. 6, n. 4, p. 109, doi. 10.3390/diseases6040109
By:
- Kelly, Dervla;
- Yang, Liying;
- Pei, Zhiheng
Publication type:
Article
Case control study comparing the HPV genome in patients with oral cavity squamous cell carcinoma to normal patients using metagenomic shotgun sequencing.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-83197-x
By:
- Ganly, Ian;
- Pei, Zhiheng;
- Hao, Yuhan;
- Ma, Yingfei;
- Rosenthal, Matthew;
- Wu, Zhenglin;
- Migliacci, Jocelyn;
- Huang, Bin;
- Katabi, Nora;
- Tseng, Wenzhi;
- Brown, Stuart;
- Tang, Yi-Wei;
- Yang, Liying
Publication type:
Article
Periodontal pathogens are a risk factor of oral cavity squamous cell carcinoma, independent of tobacco and alcohol and human papillomavirus.
Published in:
International Journal of Cancer, 2019, v. 145, n. 3, p. 775, doi. 10.1002/ijc.32152
By:
- Ganly, Ian;
- Yang, Liying;
- Giese, Rachel A.;
- Hao, Yuhan;
- Nossa, Carlos W.;
- Morris, Luc G.T.;
- Rosenthal, Matthew;
- Migliacci, Jocelyn;
- Kelly, Dervla;
- Tseng, Wenzhi;
- Hu, Jiyuan;
- Li, Huilin;
- Brown, Stuart;
- Pei, Zhiheng
Publication type:
Article
Human Microbiome and HIV/AIDS.
Published in:
Current HIV/AIDS Reports, 2012, v. 9, n. 1, p. 44, doi. 10.1007/s11904-011-0103-7
By:
- Saxena, Deepak;
- Li, Yihong;
- Yang, Liying;
- Pei, Zhiheng;
- Poles, Michael;
- Abrams, William;
- Malamud, Daniel
Publication type:
Article
Drinking alcohol is associated with variation in the human oral microbiome in a large study of American adults.
Published in:
Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0448-x
By:
- Fan, Xiaozhou;
- Peters, Brandilyn A.;
- Jacobs, Eric J.;
- Gapstur, Susan M.;
- Purdue, Mark P.;
- Freedman, Neal D.;
- Alekseyenko, Alexander V.;
- Wu, Jing;
- Yang, Liying;
- Pei, Zhiheng;
- Hayes, Richard B.;
- Ahn, Jiyoung
Publication type:
Article
Characteristics of Gut Microbiota in Patients With Rheumatoid Arthritis in Shanghai, China.
Published in:
Frontiers in Cellular & Infection Microbiology, 2019, v. 9, p. 1, doi. 10.3389/fcimb.2019.00369
By:
- Sun, Yang;
- Chen, Qian;
- Lin, Ping;
- Xu, Rong;
- He, Dongyi;
- Ji, Weiqing;
- Bian, Yanqin;
- Shen, Yu;
- Li, Qingtian;
- Liu, Chang;
- Dong, Ke;
- Tang, Yi-Wei;
- Pei, Zhiheng;
- Yang, Liying;
- Lu, Hongzhou;
- Guo, Xiaokui;
- Xiao, Lianbo
Publication type:
Article
The effect of H. pylori eradication on meal-associated changes in plasma ghrelin and leptin.
Published in:
2011
By:
- Francois, Fritz;
- Roper, Jatin;
- Joseph, Neal;
- Pei, Zhiheng;
- Chhada, Aditi;
- Shak, Joshua R;
- de Perez, Asalia Z Olivares;
- Perez-Perez, Guillermo I;
- Blaser, Martin J
Publication type:
journal article
The effect of H. pylori eradication on mealassociated changes in plasma ghrelin and leptin.
Published in:
BMC Gastroenterology, 2011, v. 11, n. 1, p. 37, doi. 10.1186/1471-230X-11-37
By:
- Francois, Fritz;
- Roper, Jatin;
- Joseph, Neal;
- Zhiheng Pei;
- Chhada, Aditi;
- Shak, Joshua R.;
- Perez, Asalia Z. Olivares de;
- Perez-Perez, Guillermo I.;
- Blaser, Martin J.
Publication type:
Article
HPViewer: sensitive and specific genotyping of human papillomavirus in metagenomic DNA.
Published in:
Bioinformatics, 2018, v. 34, n. 12, p. 1986, doi. 10.1093/bioinformatics/bty037
By:
- Hao, Yuhan;
- Yang, Liying;
- Neto, Antonio Galvao;
- Amin, Milan R;
- Kelly, Dervla;
- Brown, Stuart M;
- Branski, Ryan C;
- Pei, Zhiheng
Publication type:
Article
Human Gut Microbiome and Risk for Colorectal Cancer.
Published in:
JNCI: Journal of the National Cancer Institute, 2013, v. 105, n. 24, p. 1907, doi. 10.1093/jnci/djt300
By:
- Ahn, Jiyoung;
- Sinha, Rashmi;
- Pei, Zhiheng;
- Dominianni, Christine;
- Wu, Jing;
- Shi, Jianxin;
- Goedert, James J.;
- Hayes, Richard B.;
- Yang, Liying
Publication type:
Article

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