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Identification of High-Confidence Structural Variants in Domesticated Rainbow Trout Using Whole-Genome Sequencing.
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- Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.639355
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- Article
Genomic selection models substantially improve the accuracy of genetic merit predictions for fillet yield and body weight in rainbow trout using a multi-trait model and multi-generation progeny testing.
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- Genetics Selection Evolution, 2023, v. 55, n. 1, p. 1, doi. 10.1186/s12711-023-00782-6
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- Article
Differential expression of long non-coding RNAs in three genetic lines of rainbow trout in response to infection with Flavobacterium psychrophilum.
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- Scientific Reports, 2016, p. 36032, doi. 10.1038/srep36032
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- Article
A conserved haplotype controls parallel adaptation in geographically distant salmonid populations.
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- Molecular Ecology, 2012, v. 21, n. 2, p. 237, doi. 10.1111/j.1365-294X.2011.05305.x
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- Article
Detection and Validation of QTL Affecting Bacterial Cold Water Disease Resistance in Rainbow Trout Using Restriction-Site Associated DNA Sequencing.
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- PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0138435
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- Article
RNA-seq Analysis of Early Hepatic Response to Handling and Confinement Stress in Rainbow Trout.
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- PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0088492
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- Article
Assessment of Genetic Correlation between Bacterial Cold Water Disease Resistance and Spleen Index in a Domesticated Population of Rainbow Trout: Identification of QTL on Chromosome Omy19.
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- PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0075749
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- Article
RNA-Seq Identifies SNP Markers for Growth Traits in Rainbow Trout.
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- PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0036264
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- Article
Transcriptome profiling in fast versus slow-growing rainbow trout across seasonal gradients.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2363-5
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- Article
Genome-Wide Association Study for Identifying Loci that Affect Fillet Yield, Carcass, and Body Weight Traits in Rainbow Trout (Oncorhynchus mykiss).
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- Frontiers in Genetics, 2016, v. 7, p. 1, doi. 10.3389/fgene.2016.00203
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- Article
Evaluation of Genome-Enabled Selection for Bacterial Cold Water Disease Resistance Using Progeny Performance Data in Rainbow Trout: Insights on Genotyping Methods and Genomic Prediction Models.
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- Frontiers in Genetics, 2016, p. 1, doi. 10.3389/fgene.2016.00096
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- Article
Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout.
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- Frontiers in Genetics, 2015, p. 1, doi. 10.3389/fgene.2015.00298
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- Article
Assessment of autozygosity in Nellore cows (Bos indicus) through high-density SNP genotypes.
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- Frontiers in Genetics, 2015, v. 5, p. 1, doi. 10.3389/fgene.2015.00005
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- Article
Whole-body transcriptome of selectively bred, resistant-, control-, and susceptible-line rainbow trout following experimental challenge with Flavobacterium psychrophilum.
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- Frontiers in Genetics, 2015, v. 5, p. 1, doi. 10.3389/fgene.2014.00453
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- Article
A first generation BAC-based physical map of the rainbow trout genome.
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- BMC Genomics, 2009, v. 10, p. 462, doi. 10.1186/1471-2164-10-462
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- Article
Comparative mapping of expressed sequence tags containing microsatellites in rainbow trout (Oncorhynchus mykiss).
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- BMC Genomics, 2005, v. 6, p. 1, doi. 10.1186/1471-2164-6-54
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- Article
Accurate genomic predictions for BCWD resistance in rainbow trout are achieved using low‐density SNP panels: Evidence that long‐range LD is a major contributing factor.
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- Journal of Animal Breeding & Genetics, 2018, v. 135, n. 4, p. 263, doi. 10.1111/jbg.12335
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- Article
A New Single Nucleotide Polymorphism Database for North American Atlantic Salmon Generated Through Whole Genome Resequencing.
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- Frontiers in Genetics, 2020, p. 1, doi. 10.3389/fgene.2020.00085
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- Article
Accurate genotype imputation from low-coverage whole-genome sequencing data of rainbow trout.
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- G3: Genes | Genomes | Genetics, 2024, v. 14, n. 9, p. 1, doi. 10.1093/g3journal/jkae168
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- Article
The generation of the first chromosome-level de novo genome assembly and the development and validation of a 50K SNP array for the St. John River aquaculture strain of North American Atlantic salmon.
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- G3: Genes | Genomes | Genetics, 2023, v. 13, n. 9, p. 1, doi. 10.1093/g3journal/jkad138
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- Article
A long reads-based de-novo assembly of the genome of the Arlee homozygous line reveals chromosomal rearrangements in rainbow trout.
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- G3: Genes | Genomes | Genetics, 2021, v. 11, n. 4, p. 1, doi. 10.1093/g3journal/jkab052
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- Article
Phenotypic and Genetic Variation in Two North American Arctic Charr, Salvelinus alpinus, Stocks Cultured in a Recirculating Aquaculture System.
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- Journal of the World Aquaculture Society, 2013, v. 44, n. 4, p. 473, doi. 10.1111/jwas.12049
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- Article
QTL affecting stress response to crowding in a rainbow trout broodstock population.
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- BMC Genetics, 2012, v. 13, n. 1, p. 97, doi. 10.1186/1471-2156-13-97
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- Article
Identification of SNPs associated with muscle yield and quality traits using allelic-imbalance analyses of pooled RNA-Seq samples in rainbow trout.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3992-z
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- Article
Genome-wide association analysis and accuracy of genome-enabled breeding value predictions for resistance to infectious hematopoietic necrosis virus in a commercial rainbow trout breeding population.
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- Genetics Selection Evolution, 2019, v. 51, n. 1, p. N.PAG, doi. 10.1186/s12711-019-0489-z
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- Article
Whole-genome mapping of quantitative trait loci and accuracy of genomic predictions for resistance to columnaris disease in two rainbow trout breeding populations.
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- Genetics Selection Evolution, 2019, v. 51, n. 1, p. N.PAG, doi. 10.1186/s12711-019-0484-4
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- Article
Genome-Wide Association Analysis With a 50K Transcribed Gene SNP-Chip Identifies QTL Affecting Muscle Yield in Rainbow Trout.
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- Frontiers in Genetics, 2018, p. N.PAG, doi. 10.3389/fgene.2018.00387
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- Article
Retrospective Evaluation of Marker-Assisted Selection for Resistance to Bacterial Cold Water Disease in Three Generations of a Commercial Rainbow Trout Breeding Population.
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- Frontiers in Genetics, 2018, p. 1, doi. 10.3389/fgene.2018.00286
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- Article
A New Single Nucleotide Polymorphism Database for Rainbow Trout Generated Through Whole Genome Resequencing.
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- Frontiers in Genetics, 2018, p. 1, doi. 10.3389/fgene.2018.00147
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- Article
Similar Genetic Architecture with Shared and Unique Quantitative Trait Loci for Bacterial Cold Water Disease Resistance in Two Rainbow Trout Breeding Populations.
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- Frontiers in Genetics, 2017, p. 1, doi. 10.3389/fgene.2017.00156
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- Article
Development of a High-Density 665 K SNP Array for Rainbow Trout Genome-Wide Genotyping.
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- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.941340
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- Article
Identification of Haplotypes Associated With Resistance to Bacterial Cold Water Disease in Rainbow Trout Using Whole-Genome Resequencing.
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- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.936806
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- Article
Identification and regulatory analysis of rainbow trout tapasin and tapasin-related genes.
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- Immunogenetics, 2006, v. 58, n. 1, p. 56, doi. 10.1007/s00251-005-0070-5
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- Article
Physical and genetic mapping of the rainbow trout major histocompatibility regions: evidence for duplication of the class I region.
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- Immunogenetics, 2003, v. 55, n. 8, p. 561, doi. 10.1007/s00251-003-0615-4
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- Article
Variance and covariance estimates for resistance to bacterial cold water disease and columnaris disease in two rainbow trout breeding populations 1.
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- Journal of Animal Science, 2019, v. 97, n. 3, p. 1124, doi. 10.1093/jas/sky478
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- Article
A resource of single-nucleotide polymorphisms for rainbow trout generated by restriction-site associated DNA sequencing of doubled haploids.
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- Molecular Ecology Resources, 2014, v. 14, n. 3, p. 588, doi. 10.1111/1755-0998.12204
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- Article
Analysis of BAC-end sequences in rainbow trout: Content characterization and assessment of synteny between trout and other fish genomes.
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- BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-314
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- Article
A first generation integrated map of the rainbow trout genome.
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- BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-180
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- Publication type:
- Article
Analysis of BAC-end sequences in rainbow trout: Content characterization and assessment of synteny between trout and other fish genomes.
- Published in:
- BMC Genomics, 2011, v. 12, n. 1, p. 314, doi. 10.1186/1471-2164-12-314
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- Publication type:
- Article
A first generation integrated map of the rainbow trout genome.
- Published in:
- BMC Genomics, 2011, v. 12, n. 1, p. 180, doi. 10.1186/1471-2164-12-180
- By:
- Publication type:
- Article
Genomic selection models double the accuracy of predicted breeding values for bacterial cold water disease resistance compared to a traditional pedigree-based model in rainbow trout aquaculture.
- Published in:
- Genetics Selection Evolution, 2017, v. 49, p. 1, doi. 10.1186/s12711-017-0293-6
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- Publication type:
- Article
Identification of Single-Nucleotide Polymorphism Markers Associated with Cortisol Response to Crowding in Rainbow Trout.
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- Marine Biotechnology, 2015, v. 17, n. 3, p. 328, doi. 10.1007/s10126-015-9621-4
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- Article
Detection of QTL in Rainbow Trout Affecting Survival When Challenged with Flavobacterium psychrophilum.
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- Marine Biotechnology, 2014, v. 16, n. 3, p. 349, doi. 10.1007/s10126-013-9553-9
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- Article
Quantitative Trait Loci Affecting Response to Crowding Stress in an F Generation of Rainbow Trout Produced Through Phenotypic Selection.
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- Marine Biotechnology, 2013, v. 15, n. 5, p. 613, doi. 10.1007/s10126-013-9512-5
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- Article
A Second Generation Integrated Map of the Rainbow Trout ( Oncorhynchus mykiss) Genome: Analysis of Conserved Synteny with Model Fish Genomes.
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- Marine Biotechnology, 2012, v. 14, n. 3, p. 343, doi. 10.1007/s10126-011-9418-z
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- Publication type:
- Article
Suggestive Association of Major Histocompatibility IB Genetic Markers with Resistance to Bacterial Cold Water Disease in Rainbow Trout ( Oncorhynchus mykiss).
- Published in:
- Marine Biotechnology, 2008, v. 10, n. 4, p. 429, doi. 10.1007/s10126-007-9080-7
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- Article
Genome-wide association analysis of the resistance to infectious hematopoietic necrosis virus in two rainbow trout aquaculture lines confirms oligogenic architecture with several moderate effect quantitative trait loci.
- Published in:
- Frontiers in Genetics, 2024, p. 1, doi. 10.3389/fgene.2024.1394656
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- Publication type:
- Article
Rapid discovery of SNPs that differentiate hatchery steelhead trout from ESA-listed natural-origin steelhead trout using a 57K SNP array.
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- Canadian Journal of Fisheries & Aquatic Sciences, 2018, v. 75, n. 7, p. 1160, doi. 10.1139/cjfas-2017-0116
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- Article