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Transient DNMT1 suppression reveals hidden heritable marks in the genome.
Published in:
Nucleic Acids Research, 2015, v. 43, n. 3, p. 1485, doi. 10.1093/nar/gku1386
By:
- McGraw, Serge;
- Zhang, Jacques X.;
- Farag, Mena;
- Chan, Donovan;
- Caron, Maxime;
- Konermann, Carolin;
- Oakes, Christopher C.;
- Mohan, K. Naga;
- Plass, Christoph;
- Pastinen, Tomi;
- Bourque, Guillaume;
- Chaillet, J. Richard;
- Trasler, Jacquetta M.
Publication type:
Article
BAZ2A (TIP5) is involved in epigenetic alterations in prostate cancer and its overexpression predicts disease recurrence.
Published in:
Nature Genetics, 2015, v. 47, n. 1, p. 22, doi. 10.1038/ng.3165
By:
- Gu, Lei;
- Provenzano, Maurizio;
- Yaspo, Marie-Laure;
- Korbel, Jan;
- Schlomm, Thorsten;
- Eils, Roland;
- Frommel, Sandra C;
- Oakes, Christopher C;
- Baer, Constance;
- Weiss, Melanie;
- Plass, Christoph;
- Simon, Ronald;
- Grupp, Katharina;
- Sauter, Guido;
- Gerig, Cristina Y;
- Bär, Dominik;
- Santoro, Raffaella;
- Robinson, Mark D;
- Gu, Zuguang;
- Brors, Benedikt
Publication type:
Article
Loss of spermatogonia and wide-spread DNA methylation defects in newborn male mice deficient in DNMT3L.
Published in:
BMC Developmental Biology, 2007, v. 7, p. 104, doi. 10.1186/1471-213X-7-104
By:
- La Salle, Sophie;
- Oakes, Christopher C.;
- Neaga, Oana R.;
- Bourc'his, Déborah;
- Bestor, Timothy H.;
- Trasler, Jacquetta M.
Publication type:
Article
Impact of sex on outcomes in patients with hairy cell leukemia. An HCL patient data registry analysis.
Published in:
American Journal of Hematology, 2023, v. 98, n. 5, p. E116, doi. 10.1002/ajh.26881
By:
- Epperla, Narendranath;
- Zhao, Qiuhong;
- Anghelina, Mirela;
- Neal, Jasmine;
- Blachly, James S.;
- Rogers, Kerry A.;
- Lozanski, Gerard;
- Oakes, Christopher C.;
- Bhat, Seema A.;
- Zent, Clive S.;
- Banerji, Versha;
- Grever, Michael;
- Andritsos, Leslie A.
Publication type:
Article
Analysis of 3760 hematologic malignancies reveals rare transcriptomic aberrations of driver genes.
Published in:
Genome Medicine, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13073-024-01331-6
By:
- Cao, Xueqi;
- Huber, Sandra;
- Ahari, Ata Jadid;
- Traube, Franziska R.;
- Seifert, Marc;
- Oakes, Christopher C.;
- Secheyko, Polina;
- Vilov, Sergey;
- Scheller, Ines F.;
- Wagner, Nils;
- Yépez, Vicente A.;
- Blombery, Piers;
- Haferlach, Torsten;
- Heinig, Matthias;
- Wachutka, Leonhard;
- Hutter, Stephan;
- Gagneur, Julien
Publication type:
Article
Analysis of 3760 hematologic malignancies reveals rare transcriptomic aberrations of driver genes.
Published in:
Genome Medicine, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13073-024-01331-6
By:
- Cao, Xueqi;
- Huber, Sandra;
- Ahari, Ata Jadid;
- Traube, Franziska R.;
- Seifert, Marc;
- Oakes, Christopher C.;
- Secheyko, Polina;
- Vilov, Sergey;
- Scheller, Ines F.;
- Wagner, Nils;
- Yépez, Vicente A.;
- Blombery, Piers;
- Haferlach, Torsten;
- Heinig, Matthias;
- Wachutka, Leonhard;
- Hutter, Stephan;
- Gagneur, Julien
Publication type:
Article
Germline Allele-Specific Expression of DAPK1 in Chronic Lymphocytic Leukemia.
Published in:
PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0055261
By:
- Wei, Quan-Xiang;
- Claus, Rainer;
- Hielscher, Thomas;
- Mertens, Daniel;
- Raval, Aparna;
- Oakes, Christopher C.;
- Tanner, Stephan M.;
- de la Chapelle, Albert;
- Byrd, John C.;
- Stilgenbauer, Stephan;
- Plass, Christoph
Publication type:
Article
Critical Period of Nonpromoter DNA Methylation Acquisition during Prenatal Male Germ Cell Development.
Published in:
PLoS ONE, 2011, v. 6, n. 9, p. 1, doi. 10.1371/journal.pone.0024156
By:
- Niles, Kirsten M.;
- Chan, Donovan;
- Salle, Sophie La;
- Oakes, Christopher C.;
- Trasler, Jacquetta M.
Publication type:
Article
Follicular Helper and Regulatory T Cells Drive the Development of Spontaneous Epstein–Barr Virus Lymphoproliferative Disorder.
Published in:
Cancers, 2023, v. 15, n. 11, p. 3046, doi. 10.3390/cancers15113046
By:
- Ahmed, Elshafa Hassan;
- Lustberg, Mark;
- Hale, Claire;
- Sloan, Shelby;
- Mao, Charlene;
- Zhang, Xiaoli;
- Ozer, Hatice Gulcin;
- Schlotter, Sarah;
- Smith, Porsha L.;
- Jeney, Frankie;
- Chan, Wing Keung;
- Harrington, Bonnie K.;
- Weigel, Christoph;
- Brooks, Eric;
- Klimaszewski, Haley L.;
- Oakes, Christopher C.;
- Abebe, Tamrat;
- Ibrahim, Muntaser E.;
- Alinari, Lapo;
- Behbehani, Gregory K.
Publication type:
Article
Drug-perturbation-based stratification of blood cancer.
Published in:
2018
By:
- Dietrich, Sascha;
- Oleś, Małgorzata;
- Junyan Lu;
- Sellner, Leopold;
- Anders, Simon;
- Velten, Britta;
- Bian Wu;
- Hüllein, Jennifer;
- da Silva Liberio, Michelle;
- Walther, Tatjana;
- Wagner, Lena;
- Rabe, Sophie;
- Ghidelli-Disse, Sonja;
- Bantscheff, Marcus;
- Oleś, Andrzej K.;
- Słabicki, Mikołaj;
- Mock, Andreas;
- Oakes, Christopher C.;
- Shihui Wang;
- Oppermann, Sina
Publication type:
journal article
Epigenetic regulation of diacylglycerol kinase alpha promotes radiation-induced fibrosis.
Published in:
Nature Communications, 2016, v. 7, n. 3, p. 10893, doi. 10.1038/ncomms10893
By:
- Weigel, Christoph;
- Veldwijk, Marlon R.;
- Oakes, Christopher C.;
- Seibold, Petra;
- Slynko, Alla;
- Liesenfeld, David B.;
- Rabionet, Mariona;
- Hanke, Sabrina A.;
- Wenz, Frederik;
- Sperk, Elena;
- Benner, Axel;
- Rösli, Christoph;
- Sandhoff, Roger;
- Assenov, Yassen;
- Plass, Christoph;
- Herskind, Carsten;
- Chang-Claude, Jenny;
- Schmezer, Peter;
- Popanda, Odilia
Publication type:
Article
p19-INK4d inhibits neuroblastoma cell growth, induces differentiation and is hypermethylated and downregulated in MYCN-amplified neuroblastomas.
Published in:
Human Molecular Genetics, 2014, v. 23, n. 25, p. 6826, doi. 10.1093/hmg/ddu406
By:
- Dreidax, Daniel;
- Bannert, Steffen;
- Henrich, Kai-Oliver;
- Schröder, Christina;
- Bender, Sebastian;
- Oakes, Christopher C.;
- Lindner, Sven;
- Schulte, Johannes H.;
- Duffy, David;
- Schwarzl, Thomas;
- Saadati, Maral;
- Ehemann, Volker;
- Benner, Axel;
- Pfister, Stefan;
- Fischer, Matthias;
- Westermann, Frank
Publication type:
Article
p19-INK4d inhibits neuroblastoma cell growth, induces differentiation and is hypermethylated and downregulated in MYCN-amplified neuroblastomas.
Published in:
Human Molecular Genetics, 2012, v. 21, n. 25, p. 1, doi. 10.1093/hmg/ddu406
By:
- Dreidax, Daniel;
- Bannert, Steffen;
- Henrich, Kai-Oliver;
- Schröder, Christina;
- Bender, Sebastian;
- Oakes, Christopher C.;
- Lindner, Sven;
- Schulte, Johannes H.;
- Duffy, David;
- Schwarzl, Thomas;
- Saadati, Maral;
- Ehemann, Volker;
- Benner, Axel;
- Pfister, Stefan;
- Fischer, Matthias;
- Westermann, Frank
Publication type:
Article
Epigenetic silencing of miR-708 enhances NF-κB signaling in chronic lymphocytic leukemia.
Published in:
International Journal of Cancer, 2015, v. 137, n. 6, p. 1352, doi. 10.1002/ijc.29491
By:
- Baer, Constance;
- Oakes, Christopher C.;
- Ruppert, Amy S.;
- Claus, Rainer;
- Kim‐Wanner, Soo‐Zin;
- Mertens, Daniel;
- Zenz, Thorsten;
- Stilgenbauer, Stephan;
- Byrd, John C.;
- Plass, Christoph
Publication type:
Article
Germline variants of base excision repair genes and breast cancer: A polymorphism in DNA polymerase gamma modifies gene expression and breast cancer risk.
Published in:
International Journal of Cancer, 2013, v. 132, n. 1, p. 55, doi. 10.1002/ijc.27665
By:
- Popanda, Odilia;
- Seibold, Petra;
- Nikolov, Ivaylo;
- Oakes, Christopher C.;
- Burwinkel, Barbara;
- Hausmann, Sebastian;
- Flesch‐Janys, Dieter;
- Plass, Christoph;
- Chang‐Claude, Jenny;
- Schmezer, Peter
Publication type:
Article
Effects of epigenetic therapy on natural killer cell function and development in hematologic malignancy.
Published in:
Journal of Leukocyte Biology, 2023, v. 113, n. 5, p. 518, doi. 10.1093/jleuko/qiad026
By:
- Lordo, Matthew R;
- Stiff, Andrew R;
- Oakes, Christopher C;
- Mundy-Bosse, Bethany L
Publication type:
Article
Loss of DNMT1o Disrupts Imprinted X Chromosome Inactivation and Accentuates Placental Defects in Females.
Published in:
PLoS Genetics, 2013, v. 9, n. 11, p. 1, doi. 10.1371/journal.pgen.1003873
By:
- McGraw, Serge;
- Oakes, Christopher C.;
- Martel, Josée;
- Cirio, M. Cecilia;
- de Zeeuw, Pauline;
- Mak, Winifred;
- Plass, Christoph;
- Bartolomei, Marisa S.;
- Chaillet, J. Richard;
- Trasler, Jacquetta M.
Publication type:
Article
Early aberrant DNA methylation events in a mouse model of acute myeloid leukemia.
Published in:
Genome Medicine, 2014, v. 6, n. 4, p. 91, doi. 10.1186/gm551
By:
- Sonnet, Miriam;
- Claus, Rainer;
- Becker, Natalia;
- Zucknick, Manuela;
- Petersen, Jana;
- Lipka, Daniel B.;
- Oakes, Christopher C.;
- Andrulis, Mindaugas;
- Lier, Amelie;
- Milsom, Michael D.;
- Witte, Tania;
- Lei Gu;
- Kim-Wanner, Soo-Zin;
- Schirmacher, Peter;
- Wulfert, Michael;
- Gattermann, Norbert;
- Lübbert, Michael;
- Rosenbauer, Frank;
- Rehli, Michael;
- Bullinger, Lars
Publication type:
Article
Precision oncology in AML: validation of the prognostic value of the knowledge bank approach and suggestions for improvement.
Published in:
2021
By:
- Bill, Marius;
- Mrózek, Krzysztof;
- Giacopelli, Brian;
- Kohlschmidt, Jessica;
- Nicolet, Deedra;
- Papaioannou, Dimitrios;
- Eisfeld, Ann-Kathrin;
- Kolitz, Jonathan E.;
- Powell, Bayard L.;
- Carroll, Andrew J.;
- Stone, Richard M.;
- Garzon, Ramiro;
- Byrd, John C.;
- Bloomfield, Clara D.;
- Oakes, Christopher C.
Publication type:
Letter
Effect of Malaria Infection on Epstein-Barr Virus Persistence in Kenyan Children.
Published in:
Journal of Infectious Diseases, 2024, v. 229, n. 1, p. 73, doi. 10.1093/infdis/jiad264
By:
- Samayoa-Reyes, Gabriela;
- Weigel, Christoph;
- Koech, Emmily;
- Waomba, Kevin;
- Jackson, Conner;
- Onditi, Ian A;
- Sabourin, Katherine R;
- Kenney, Shannon;
- Baiocchi, Robert A;
- Oakes, Christopher C;
- Ogolla, Sidney;
- Rochford, Rosemary
Publication type:
Article
Single-cell analysis based dissection of clonality in myelofibrosis.
Published in:
Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-13892-x
By:
- Mylonas, Elena;
- Yoshida, Kenichi;
- Frick, Mareike;
- Hoyer, Kaja;
- Christen, Friederike;
- Kaeda, Jaspal;
- Obenaus, Matthias;
- Noerenberg, Daniel;
- Hennch, Cornelius;
- Chan, Willy;
- Ochi, Yotaro;
- Shiraishi, Yuichi;
- Shiozawa, Yusuke;
- Zenz, Thorsten;
- Oakes, Christopher C.;
- Sawitzki, Birgit;
- Schwarz, Michaela;
- Bullinger, Lars;
- le Coutre, Philipp;
- Rose-Zerilli, Matthew J. J.
Publication type:
Article
Methylome-based cell-of-origin modeling (Methyl-COOM) identifies aberrant expression of immune regulatory molecules in CLL.
Published in:
Genome Medicine, 2020, v. 12, n. 1, p. 1, doi. 10.1186/s13073-020-00724-7
By:
- Wierzbinska, Justyna A.;
- Toth, Reka;
- Ishaque, Naveed;
- Rippe, Karsten;
- Mallm, Jan-Philipp;
- Klett, Lara C.;
- Mertens, Daniel;
- Zenz, Thorsten;
- Hielscher, Thomas;
- Seifert, Marc;
- Küppers, Ralf;
- Assenov, Yassen;
- Lutsik, Pavlo;
- Stilgenbauer, Stephan;
- Roessner, Philipp M.;
- Seiffert, Martina;
- Byrd, John;
- Oakes, Christopher C.;
- Plass, Christoph;
- Lipka, Daniel B.
Publication type:
Article

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