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Insights into opium poppy (Papaver spp.) genetic diversity from genotyping-by-sequencing analysis.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-021-04056-3
By:
- Hong, Uyen Vu Thuy;
- Tamiru-Oli, Muluneh;
- Hurgobin, Bhavna;
- Okey, Christopher R.;
- Abreu, Artur R.;
- Lewsey, Mathew G.
Publication type:
Article
A multifaceted genomics approach allows the isolation of the rice Pia-blast resistance gene consisting of two adjacent NBS-LRR protein genes.
Published in:
Plant Journal, 2011, v. 66, n. 3, p. 467, doi. 10.1111/j.1365-313X.2011.04502.x
By:
- Okuyama, Yudai;
- Kanzaki, Hiroyuki;
- Abe, Akira;
- Yoshida, Kentaro;
- Tamiru, Muluneh;
- Saitoh, Hiromasa;
- Fujibe, Takahiro;
- Matsumura, Hideo;
- Shenton, Matt;
- Galam, Dominique Clark;
- Undan, Jerwin;
- Ito, Akiko;
- Sone, Teruo;
- Terauchi, Ryohei
Publication type:
Article
MutMap accelerates breeding of a salt-tolerant rice cultivar.
Published in:
Nature Biotechnology, 2015, v. 33, n. 5, p. 445, doi. 10.1038/nbt.3188
By:
- Takagi, Hiroki;
- Tamiru, Muluneh;
- Abe, Akira;
- Yoshida, Kentaro;
- Uemura, Aiko;
- Yaegashi, Hiroki;
- Obara, Tsutomu;
- Oikawa, Kaori;
- Utsushi, Hiroe;
- Kanzaki, Eiko;
- Mitsuoka, Chikako;
- Natsume, Satoshi;
- Kosugi, Shunichi;
- Kanzaki, Hiroyuki;
- Matsumura, Hideo;
- Urasaki, Naoya;
- Kamoun, Sophien;
- Terauchi, Ryohei
Publication type:
Article
Genome sequencing reveals agronomically important loci in rice using MutMap.
Published in:
Nature Biotechnology, 2012, v. 30, n. 2, p. 174, doi. 10.1038/nbt.2095
By:
- Abe, Akira;
- Kosugi, Shunichi;
- Yoshida, Kentaro;
- Natsume, Satoshi;
- Takagi, Hiroki;
- Kanzaki, Hiroyuki;
- Matsumura, Hideo;
- Yoshida, Kakoto;
- Mitsuoka, Chikako;
- Tamiru, Muluneh;
- Innan, Hideki;
- Cano, Liliana;
- Kamoun, Sophien;
- Terauchi, Ryohei
Publication type:
Article
AgriSeqDB: an online RNA-Seq database for functional studies of agriculturally relevant plant species.
Published in:
BMC Plant Biology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12870-018-1406-2
By:
- Robinson, Andrew J.;
- Tamiru, Muluneh;
- Salby, Rachel;
- Bolitho, Clayton;
- Williams, Andrew;
- Huggard, Simon;
- Fisch, Eva;
- Unsworth, Kathryn;
- Whelan, James;
- Lewsey, Mathew G.
Publication type:
Article
The rice ( Oryza sativa L.) LESION MIMIC RESEMBLING, which encodes an AAA-type ATPase, is implicated in defense response.
Published in:
Molecular Genetics & Genomics, 2015, v. 290, n. 2, p. 611, doi. 10.1007/s00438-014-0944-z
By:
- Fekih, Rym;
- Tamiru, Muluneh;
- Kanzaki, Hiroyuki;
- Abe, Akira;
- Yoshida, Kentaro;
- Kanzaki, Eiko;
- Saitoh, Hiromasa;
- Takagi, Hiroki;
- Natsume, Satoshi;
- Undan, Jerwin;
- Undan, Jesusa;
- Terauchi, Ryohei
Publication type:
Article
QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations.
Published in:
Plant Journal, 2013, v. 74, n. 1, p. 174, doi. 10.1111/tpj.12105
By:
- Takagi, Hiroki;
- Abe, Akira;
- Yoshida, Kentaro;
- Kosugi, Shunichi;
- Natsume, Satoshi;
- Mitsuoka, Chikako;
- Uemura, Aiko;
- Utsushi, Hiroe;
- Tamiru, Muluneh;
- Takuno, Shohei;
- Innan, Hideki;
- Cano, Liliana M.;
- Kamoun, Sophien;
- Terauchi, Ryohei
Publication type:
Article
MutMap+: Genetic Mapping and Mutant Identification without Crossing in Rice.
Published in:
PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0068529
By:
- Fekih, Rym;
- Takagi, Hiroki;
- Tamiru, Muluneh;
- Abe, Akira;
- Natsume, Satoshi;
- Yaegashi, Hiroki;
- Sharma, Shailendra;
- Sharma, Shiveta;
- Kanzaki, Hiroyuki;
- Matsumura, Hideo;
- Saitoh, Hiromasa;
- Mitsuoka, Chikako;
- Utsushi, Hiroe;
- Uemura, Aiko;
- Kanzaki, Eiko;
- Kosugi, Shunichi;
- Yoshida, Kentaro;
- Cano, Liliana;
- Kamoun, Sophien;
- Terauchi, Ryohei
Publication type:
Article
A cytochrome P450, OsDSS1, is involved in growth and drought stress responses in rice ( Oryza sativa L.).
Published in:
Plant Molecular Biology, 2015, v. 88, n. 1-2, p. 85, doi. 10.1007/s11103-015-0310-5
By:
- Tamiru, Muluneh;
- Undan, Jerwin;
- Takagi, Hiroki;
- Abe, Akira;
- Yoshida, Kakoto;
- Undan, Jesusa;
- Natsume, Satoshi;
- Uemura, Aiko;
- Saitoh, Hiromasa;
- Matsumura, Hideo;
- Urasaki, Naoya;
- Yokota, Takao;
- Terauchi, Ryohei
Publication type:
Article
Sat-BSA: an NGS-based method using local de novo assembly of long reads for rapid identification of genomic structural variations associated with agronomic traits.
Published in:
Breeding Science, 2021, v. 71, n. 3, p. 299, doi. 10.1270/jsbbs.20148
By:
- Tenta Segawa;
- Chisato Nishiyama;
- Tamiru-Oli, Muluneh;
- Yu Sugihara;
- Akira Abe;
- Hinako Sone;
- Noriaki Itoh;
- Mayu Asukai;
- Aiko Uemura;
- Kaori Oikawa;
- Hiroe Utsushi;
- Ayako Ikegami-Katayama;
- Tomohiro Imamura;
- Masashi Mori;
- Ryohei Terauchi;
- Hiroki Takagi
Publication type:
Article
WIPPER: an accurate and efficient field phenotyping platform for large-scale applications.
Published in:
Breeding Science, 2015, v. 65, n. 3, p. 285, doi. 10.1270/jsbbs.65.285
By:
- Hiroe Utsushi;
- Akira Abe;
- Muluneh Tamiru;
- Yumiko Ogasawara;
- Tsutomu Obara;
- Emiko Sato;
- Yusuke Ochiai;
- Ryohei Terauchi;
- Hiroki Takagi
Publication type:
Article
Simple sequence repeat‐based mini‐core collection for white Guinea yam (Dioscorea rotundata) germplasm.
Published in:
Crop Science, 2021, v. 61, n. 2, p. 1268, doi. 10.1002/csc2.20431
By:
- Pachakkil, Babil;
- Yamanaka, Shinsuke;
- Girma, Gezahegn;
- Matsumoto, Ryo;
- Tamiru‐Oli, Muluneh;
- Bhattacharjee, Ranjana;
- Abberton, Michael;
- Muranaka, Satoru;
- Asiedu, Robert;
- Terauchi, Ryohei;
- Takagi, Hiroko
Publication type:
Article
Development of Genomic Simple Sequence Repeat Markers for Yam.
Published in:
Crop Science, 2015, v. 55, n. 5, p. 2191, doi. 10.2135/cropsci2014.10.0725
By:
- Muluneh Tamiru;
- Shinsuke Yamanaka;
- Chikako Mitsuoka;
- Pachakkil Babil;
- Hiroko Takagi;
- Lopez-Montes, Antonio;
- Sartie, Alieu;
- Asiedu, Robert;
- Ryohei Terauchi
Publication type:
Article
Genetic Diversity in Yam Germplasm from Ethiopia and Their Relatedness to the Main Cultivated Dioscorea Species Assessed by AFLP Markers.
Published in:
Crop Science, 2007, v. 47, n. 4, p. 1744, doi. 10.2135/cropsci2006.11.0719
By:
- Tamiru, Muluneh;
- Becker, Heiko C.;
- Maass, Brigitte L.
Publication type:
Article
Strigolactone perception and deactivation by a hydrolase receptor DWARF14.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-08124-7
By:
- Seto, Yoshiya;
- Yasui, Rei;
- Kameoka, Hiromu;
- Tamiru, Muluneh;
- Cao, Mengmeng;
- Terauchi, Ryohei;
- Sakurada, Akane;
- Hirano, Rena;
- Kisugi, Takaya;
- Hanada, Atsushi;
- Umehara, Mikihisa;
- Seo, Eunjoo;
- Akiyama, Kohki;
- Burke, Jason;
- Takeda-Kamiya, Noriko;
- Li, Weiqiang;
- Hirano, Yoshinori;
- Hakoshima, Toshio;
- Mashiguchi, Kiyoshi;
- Noel, Joseph P.
Publication type:
Article
Characterizing diversity in composition and pasting properties of tuber flour in yam germplasm ( Dioscorea spp.) from Southern Ethiopia.
Published in:
Journal of the Science of Food & Agriculture, 2008, v. 88, n. 10, p. 1675, doi. 10.1002/jsfa.3263
By:
- Tamiru, Muluneh;
- Maass, Brigitte L;
- Pawelzik, Elke
Publication type:
Article
Identification of candidate flowering and sex genes in white Guinea yam (D. rotundata Poir.) by SuperSAGE transcriptome profiling.
Published in:
PLoS ONE, 2019, v. 14, n. 9, p. 1, doi. 10.1371/journal.pone.0216912
By:
- Girma, Gezahegn;
- Natsume, Satoshi;
- Carluccio, Anna Vittoria;
- Takagi, Hiroki;
- Matsumura, Hideo;
- Uemura, Aiko;
- Muranaka, Satoru;
- Takagi, Hiroko;
- Stavolone, Livia;
- Gedil, Melaku;
- Spillane, Charles;
- Terauchi, Ryohei;
- Tamiru, Muluneh
Publication type:
Article
Non-vernalization requirement for flowering in Brassica rapa conferred by a dominant allele of FLOWERING LOCUS T.
Published in:
Theoretical & Applied Genetics, 2023, v. 136, n. 6, p. 1, doi. 10.1007/s00122-023-04378-y
By:
- Nishikawa, Minami;
- Tamiru-Oli, Muluneh;
- Hara, Makishi;
- Segawa, Tenta;
- Saiga, Sorachi;
- Makita, Natsu;
- Itoh, Noriaki;
- Imamura, Tomohiro;
- Sekine, Masami;
- Takagi, Hiroki
Publication type:
Article
Next-generation sequencing-based bulked segregant analysis for QTL mapping in the heterozygous species Brassica rapa.
Published in:
Theoretical & Applied Genetics, 2019, v. 132, n. 10, p. 2913, doi. 10.1007/s00122-019-03396-z
By:
- Itoh, Noriaki;
- Segawa, Tenta;
- Tamiru, Muluneh;
- Abe, Akira;
- Sakamoto, Shota;
- Uemura, Aiko;
- Oikawa, Kaori;
- Kutsuzawa, Hiroto;
- Koga, Hironori;
- Imamura, Tomohiro;
- Terauchi, Ryohei;
- Takagi, Hiroki
Publication type:
Article
Mutation in OsLMS, a gene encoding a protein with two double-stranded RNA binding motifs, causes lesion mimic phenotype and early senescence in rice (Oryza sativa L.).
Published in:
Genes & Genetic Systems, 2012, v. 87, n. 3, p. 169, doi. 10.1266/ggs.87.169
By:
- Undan, Jerwin R.;
- Tamiru, Muluneh;
- Abe, Akira;
- Yoshida, Kentaro;
- Kosugi, Shunichi;
- Takagi, Hiroki;
- Yoshida, Kakoto;
- Kanzaki, Hiroyuki;
- Saitoh, Hiromasa;
- Fekih, Rym;
- Sharma, Shailendra;
- Undan, Jesusa;
- Yano, Masahiro;
- Terauchi, Ryohei
Publication type:
Article
Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination.
Published in:
BMC Biology, 2017, v. 15, p. 1, doi. 10.1186/s12915-017-0419-x
By:
- Muluneh Tamiru;
- Satoshi Natsume;
- Hiroki Takagi;
- White, Benjamen;
- Hiroki Yaegashi;
- Motoki Shimizu;
- Kentaro Yoshida;
- Aiko Uemura;
- Kaori Oikawa;
- Akira Abe;
- Naoya Urasaki;
- Hideo Matsumura;
- Pachakkil Babil;
- Shinsuke Yamanaka;
- Ryo Matsumoto;
- Satoru Muranaka;
- Girma, Gezahegn;
- Lopez-Montes, Antonio;
- Gedil, Melaku;
- Bhattacharjee, Ranjana
Publication type:
Article
Recent advances in Cannabis sativa genomics research.
Published in:
New Phytologist, 2021, v. 230, n. 1, p. 73, doi. 10.1111/nph.17140
By:
- Hurgobin, Bhavna;
- Tamiru‐Oli, Muluneh;
- Welling, Matthew T.;
- Doblin, Monika S.;
- Bacic, Antony;
- Whelan, James;
- Lewsey, Mathew G.
Publication type:
Article
Regulation of genome-wide DNA methylation by mobile small RNAs.
Published in:
New Phytologist, 2018, v. 217, n. 2, p. 540, doi. 10.1111/nph.14874
By:
- Tamiru, Muluneh;
- Hardcastle, Thomas J.;
- Lewsey, Mathew G.
Publication type:
Article
A chloroplast-localized protein LESION AND LAMINA BENDING affects defence and growth responses in rice.
Published in:
New Phytologist, 2016, v. 210, n. 4, p. 1282, doi. 10.1111/nph.13864
By:
- Tamiru, Muluneh;
- Takagi, Hiroki;
- Abe, Akira;
- Yokota, Takao;
- Kanzaki, Hiroyuki;
- Okamoto, Haruko;
- Saitoh, Hiromasa;
- Takahashi, Hideyuki;
- Fujisaki, Koki;
- Oikawa, Kaori;
- Uemura, Aiko;
- Natsume, Satoshi;
- Jikumaru, Yusuke;
- Matsuura, Hideyuki;
- Umemura, Kenji;
- Terry, Matthew J.;
- Terauchi, Ryohei
Publication type:
Article
The tillering phenotype of the rice plastid terminal oxidase ( PTOX) loss-of-function mutant is associated with strigolactone deficiency.
Published in:
New Phytologist, 2014, v. 202, n. 1, p. 116, doi. 10.1111/nph.12630
By:
- Tamiru, Muluneh;
- Abe, Akira;
- Utsushi, Hiroe;
- Yoshida, Kakoto;
- Takagi, Hiroki;
- Fujisaki, Koki;
- Undan, Jerwin R.;
- Rakshit, Sujay;
- Takaichi, Shinichi;
- Jikumaru, Yusuke;
- Yokota, Takao;
- Terry, Matthew J.;
- Terauchi, Ryohei
Publication type:
Article
Mut Map- Gap: whole-genome resequencing of mutant F2 progeny bulk combined with de novo assembly of gap regions identifies the rice blast resistance gene Pii.
Published in:
New Phytologist, 2013, v. 200, n. 1, p. 276, doi. 10.1111/nph.12369
By:
- Takagi, Hiroki;
- Uemura, Aiko;
- Yaegashi, Hiroki;
- Tamiru, Muluneh;
- Abe, Akira;
- Mitsuoka, Chikako;
- Utsushi, Hiroe;
- Natsume, Satoshi;
- Kanzaki, Hiroyuki;
- Matsumura, Hideo;
- Saitoh, Hiromasa;
- Yoshida, Kentaro;
- Cano, Liliana M.;
- Kamoun, Sophien;
- Terauchi, Ryohei
Publication type:
Article

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