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Multicentre validation of CT grey-level co-occurrence matrix features for overall survival in primary oesophageal adenocarcinoma.
Published in:
European Radiology, 2024, v. 34, n. 10, p. 6919, doi. 10.1007/s00330-024-10666-y
By:
- O'Shea, Robert;
- Withey, Samuel J.;
- Owczarczyk, Kasia;
- Rookyard, Christopher;
- Gossage, James;
- Godfrey, Edmund;
- Jobling, Craig;
- Parsons, Simon L.;
- Skipworth, Richard J. E.;
- Goh, Vicky;
- Fitzgerald, Rebecca C.;
- Edwards, Paul A. W.;
- Grehan, Nicola;
- Nutzinger, Barbara;
- Redmond, Aisling M.;
- Abbas, Sujath;
- Freeman, Adam;
- Smyth, Elizabeth C.;
- O'Donovan, Maria;
- Miremadi, Ahmad
Publication type:
Article
Rearrangement processes and structural variations show evidence of selection in oesophageal adenocarcinomas.
Published in:
Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03238-7
By:
- Ng, Alvin Wei Tian;
- Contino, Gianmarco;
- Killcoyne, Sarah;
- Devonshire, Ginny;
- Hsu, Ray;
- Abbas, Sujath;
- Su, Jing;
- Redmond, Aisling M.;
- Weaver, Jamie M. J.;
- Eldridge, Matthew D.;
- Tavaré, Simon;
- Oesophageal Cancer Clinical and Molecular Stratification (OCCAMS) Consortium;
- Grehan, Nicola;
- Nutzinger, Barbara;
- Fidziukiewicz, Elwira;
- Freeman, Adam;
- Smyth, Elizabeth C.;
- O'Donovan, Maria;
- Miremadi, Ahmad;
- Malhotra, Shalini
Publication type:
Article
Deciphering the Immune Complexity in Esophageal Adenocarcinoma and Pre-Cancerous Lesions With Sequential Multiplex Immunohistochemistry and Sparse Subspace Clustering Approach.
Published in:
Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.874255
By:
- Sundaram, Srinand;
- Kim, Eun Na;
- Jones, Georgina M.;
- Sivagnanam, Shamilene;
- Tripathi, Monika;
- Miremadi, Ahmad;
- Di Pietro, Massimiliano;
- Coussens, Lisa M.;
- Fitzgerald, Rebecca C.;
- Chang, Young Hwan;
- Zhuang, Lizhe
Publication type:
Article
Mutational signature dynamics shaping the evolution of oesophageal adenocarcinoma.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39957-6
By:
- Abbas, Sujath;
- Pich, Oriol;
- Devonshire, Ginny;
- Zamani, Shahriar A.;
- Katz-Summercorn, Annalise;
- Killcoyne, Sarah;
- Cheah, Calvin;
- Nutzinger, Barbara;
- Grehan, Nicola;
- Lopez-Bigas, Nuria;
- Edwards, Paul A. W.;
- Fidziukiewicz, Elwira;
- Redmond, Aisling M.;
- Freeman, Adam;
- Smyth, Elizabeth C.;
- O'Donovan, Maria;
- Miremadi, Ahmad;
- Malhotra, Shalini;
- Tripathi, Monika;
- Coles, Hannah
Publication type:
Article
The utility of P53 immunohistochemistry in the diagnosis of Barrett's oesophagus with indefinite for dysplasia.
Published in:
Histopathology, 2022, v. 80, n. 7, p. 1081, doi. 10.1111/his.14642
By:
- Januszewicz, Wladyslaw;
- Pilonis, Nastazja D;
- Sawas, Tarek;
- Phillips, Richard;
- O'Donovan, Maria;
- Miremadi, Ahmad;
- Malhotra, Shalini;
- Tripathi, Monika;
- Blasko, Adrienn;
- Katzka, David A;
- Fitzgerald, Rebecca C;
- di Pietro, Massimiliano
Publication type:
Article
Range of pathologies diagnosed using a minimally invasive capsule sponge to evaluate patients with reflux symptoms.
Published in:
Histopathology, 2017, v. 70, n. 2, p. 203, doi. 10.1111/his.13039
By:
- Paterson, Anna L;
- Lao-Sirieix, Pierre;
- O'Donovan, Maria;
- Debiram-Beecham, Irene;
- Pietro, Massimiliano;
- Miremadi, Ahmad;
- Attwood, Stephen E;
- Walter, Fiona M;
- Sasieni, Peter D;
- Fitzgerald, Rebecca C
Publication type:
Article
Transcriptomic profiling reveals three molecular phenotypes of adenocarcinoma at the gastroesophageal junction.
Published in:
International Journal of Cancer, 2019, v. 145, n. 12, p. 3389, doi. 10.1002/ijc.32384
By:
- Bornschein, Jan;
- Wernisch, Lorenz;
- Secrier, Maria;
- Miremadi, Ahmad;
- Perner, Juliane;
- MacRae, Shona;
- O'Donovan, Maria;
- Newton, Richard;
- Menon, Suraj;
- Bower, Lawrence;
- Eldridge, Matthew D.;
- Devonshire, Ginny;
- Cheah, Calvin;
- Turkington, Richard;
- Hardwick, Richard H.;
- Selgrad, Michael;
- Venerito, Marino;
- Malfertheiner, Peter;
- Fitzgerald, Rebecca C.;
- Noorani, Ayesha
Publication type:
Article
Organoid cultures recapitulate esophageal adenocarcinoma heterogeneity providing a model for clonality studies and precision therapeutics.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-05190-9
By:
- Li, Xiaodun;
- Francies, Hayley E.;
- Secrier, Maria;
- Perner, Juliane;
- Miremadi, Ahmad;
- Galeano-Dalmau, Núria;
- Barendt, William J.;
- Letchford, Laura;
- Leyden, Genevieve M.;
- Goffin, Emma K.;
- Barthorpe, Andrew;
- Lightfoot, Howard;
- Chen, Elisabeth;
- Gilbert, James;
- Noorani, Ayesha;
- Devonshire, Ginny;
- Bower, Lawrence;
- Grantham, Amber;
- MacRae, Shona;
- Grehan, Nicola
Publication type:
Article
Severe Colitis Associated with Pirfenidone Use in Idiopathic Pulmonary Fibrosis.
Published in:
2016
By:
- Fiddler, Christine A.;
- Simler, Nicky;
- Parfrey, Helen;
- Miremadi, Ahmad;
- Chilvers, Edwin R.
Publication type:
Case Study
Cancer genetics of epigenetic genes.
Published in:
Human Molecular Genetics, 2007, v. 16, n. R1, p. R28, doi. 10.1093/hmg/ddm021
By:
- Miremadi, Ahmad;
- Oestergaard, Mikkel Z.;
- Pharoah, Paul D.P.;
- Caldas, Carlos
Publication type:
Article
Author Correction: Disentangling oncogenic amplicons in esophageal adenocarcinoma.
Published in:
2024
By:
- Ng, Alvin Wei Tian;
- McClurg, Dylan Peter;
- Wesley, Ben;
- Zamani, Shahriar A.;
- Black, Emily;
- Miremadi, Ahmad;
- Giger, Olivier;
- Hoopen, Rogier ten;
- Devonshire, Ginny;
- Redmond, Aisling M.;
- Grehan, Nicola;
- Jammula, Sriganesh;
- Blasko, Adrienn;
- Li, Xiaodun;
- Aparicio, Samuel;
- Tavaré, Simon;
- Edwards, Paul A. W.;
- Nutzinger, Barbara;
- Loreno, Christine;
- Abbas, Sujath
Publication type:
Correction Notice
Disentangling oncogenic amplicons in esophageal adenocarcinoma.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-47619-4
By:
- Ng, Alvin Wei Tian;
- McClurg, Dylan Peter;
- Wesley, Ben;
- Zamani, Shahriar A.;
- Black, Emily;
- Miremadi, Ahmad;
- Giger, Olivier;
- Hoopen, Rogier ten;
- Devonshire, Ginny;
- Redmond, Aisling M.;
- Grehan, Nicola;
- Jammula, Sriganesh;
- Blasko, Adrienn;
- Li, Xiaodun;
- Aparicio, Samuel;
- Tavaré, Simon;
- Edwards, Paul A. W.;
- Nutzinger, Barbara;
- Loreno, Christine;
- Abbas, Sujath
Publication type:
Article
Disentangling oncogenic amplicons in esophageal adenocarcinoma.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-47619-4
By:
- Ng, Alvin Wei Tian;
- McClurg, Dylan Peter;
- Wesley, Ben;
- Zamani, Shahriar A.;
- Black, Emily;
- Miremadi, Ahmad;
- Giger, Olivier;
- Hoopen, Rogier ten;
- Devonshire, Ginny;
- Redmond, Aisling M.;
- Grehan, Nicola;
- Jammula, Sriganesh;
- Blasko, Adrienn;
- Li, Xiaodun;
- Aparicio, Samuel;
- Tavaré, Simon;
- Edwards, Paul A. W.;
- Nutzinger, Barbara;
- Loreno, Christine;
- Abbas, Sujath
Publication type:
Article
Low-cost and clinically applicable copy number profiling using repeat DNA.
Published in:
BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08681-8
By:
- Abujudeh, Sam;
- Zeki, Sebastian S.;
- van Lanschot, Meta C.J.;
- Pusung, Mark;
- Weaver, Jamie M.J.;
- Li, Xiaodun;
- Noorani, Ayesha;
- Metz, Andrew J.;
- Bornschein, Jan;
- Bower, Lawrence;
- Miremadi, Ahmad;
- Fitzgerald, Rebecca C.;
- Morrissey, Edward R.;
- Lynch, Andy G.
Publication type:
Article

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