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Integration of transcription and flux data reveals molecular paths associated with differences in oxygen-dependent phenotypes of Saccharomyces cerevisiae.
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- BMC Systems Biology, 2014, v. 8, n. 1, p. 1, doi. 10.1186/1752-0509-8-16
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- Article
Oxygen dependence of metabolic fluxes and energy generation of Saccharomyces cerevisiae CEN.PK113-1A.
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- BMC Systems Biology, 2008, v. 2, p. 1, doi. 10.1186/1752-0509-2-60
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- Article
Influence of growth temperature on the production of antibody Fab fragments in different microbes: A host comparative analysis.
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- Biotechnology Progress, 2011, v. 27, n. 1, p. 38, doi. 10.1002/btpr.524
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- Article
Redox Balances in Recombinant Saccharomyces cerevisiaea.
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- Annals of the New York Academy of Sciences, 1996, v. 782, n. 1, p. 286, doi. 10.1111/j.1749-6632.1996.tb40569.x
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- Article
Structure and function of Caulobacter crescentus aldose-aldose oxidoreductase.
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- Biochemical Journal, 2015, v. 472, n. 3, p. 297, doi. 10.1042/BJ20150681
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- Article
A universal gene expression system for fungi.
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- Nucleic Acids Research, 2018, v. 46, n. 18, p. e111, doi. 10.1093/nar/gky558
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- Article
Towards patterned bioelectronics: facilitated immobilization of exoelectrogenic Escherichia coli with heterologous pili.
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- Microbial Biotechnology, 2018, v. 11, n. 6, p. 1184, doi. 10.1111/1751-7915.13309
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- Article
Protein production and induction of the unfolded protein response in Trichoderma reesei strain Rut-C30 and its transformant expressing endoglucanase I with a hydrophobic tag.
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- Biotechnology & Bioengineering, 2005, v. 89, n. 3, p. 335, doi. 10.1002/bit.20350
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- Article
Primary recovery of a genetically engineered Trichoderma reesei endoglucanase I (Cel 7B) fusion protein in cloud point extraction systems.
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- Biotechnology & Bioengineering, 2002, v. 78, n. 4, p. 385, doi. 10.1002/bit.10232
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- Article
Engineering chimeric thermostable GH7 cellobiohydrolases in Saccharomyces cerevisiae.
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- Applied Microbiology & Biotechnology, 2014, v. 98, n. 7, p. 2991, doi. 10.1007/s00253-013-5177-2
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- Article
Microbial d-xylonate production.
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- Applied Microbiology & Biotechnology, 2012, v. 96, n. 1, p. 1, doi. 10.1007/s00253-012-4288-5
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- Article
Saccharomyces cerevisiae engineered to produce D-xylonate.
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- Applied Microbiology & Biotechnology, 2010, v. 88, n. 3, p. 751, doi. 10.1007/s00253-010-2787-9
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- Article
Expression of Trichoderma reesei cellulases CBHI and EGI in Ashbya gossypii.
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- Applied Microbiology & Biotechnology, 2010, v. 87, n. 4, p. 1437, doi. 10.1007/s00253-010-2610-7
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- Article
Identification in Agrobacterium tumefaciens of the d-galacturonic acid dehydrogenase gene.
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- Applied Microbiology & Biotechnology, 2010, v. 86, n. 3, p. 901, doi. 10.1007/s00253-009-2333-9
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- Article
Enhancing the flux of D-glucose to the pentose phosphate pathway in Saccharomyces cerevisiae for the production of D-ribose and ribitol.
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- Applied Microbiology & Biotechnology, 2010, v. 85, n. 3, p. 731, doi. 10.1007/s00253-009-2184-4
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- Article
Xylose transport studies with xylose-utilizing Saccharomyces cerevisiae strains expressing heterologous and homologous permeases.
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- Applied Microbiology & Biotechnology, 2007, v. 74, n. 5, p. 1041, doi. 10.1007/s00253-006-0747-1
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- Article
Xylose chemostat isolates of Saccharomyces cerevisiae show altered metabolite and enzyme levels compared with xylose, glucose, and ethanol metabolism of the original strain.
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- Applied Microbiology & Biotechnology, 2005, v. 67, n. 6, p. 827, doi. 10.1007/s00253-004-1798-9
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- Article
l-galactonate dehydratase is part of the fungal path ford-galacturonic acid catabolism.
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- Molecular Microbiology, 2006, v. 61, n. 4, p. 1060, doi. 10.1111/j.1365-2958.2006.05294.x
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- Article
Endoplasmic reticulum stress leads to the selective transcriptional downregulation of the glucoamylase gene in Aspergillus niger.
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- Molecular Microbiology, 2004, v. 53, n. 6, p. 1731, doi. 10.1111/j.1365-2958.2004.04236.x
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- Article
Activation mechanisms of the HACI-mediated unfolded protein response in filamentous fungi.
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- Molecular Microbiology, 2003, v. 47, n. 4, p. 1149, doi. 10.1046/j.1365-2958.2003.03363.x
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- Article
Interactions of the Trichoderma reesei rho3 with the secretory pathway in yeast and T. reesei.
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- Molecular Microbiology, 2001, v. 42, n. 5, p. 1349, doi. 10.1046/j.1365-2958.2001.02716.x
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Enabling Low Cost Biopharmaceuticals: A Systematic Approach to Delete Proteases from a Well-Known Protein Production Host Trichoderma reesei.
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- PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0134723
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Proteome analysis of recombinant xylose-fermenting Saccharomyces cerevisiae.
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- Yeast, 2003, v. 20, n. 4, p. 295, doi. 10.1002/yea.960
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A short-chain dehydrogenase gene from Pichia stipitis having D-arabinitol dehydrogenase activity.
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- Yeast, 1995, v. 11, n. 9, p. 839, doi. 10.1002/yea.320110906
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Molecular cloning and analysis of the yeast flocculation gene FLO1.
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- Yeast, 1994, v. 10, n. 2, p. 211, doi. 10.1002/yea.320100208
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- Article
Dolichol phosphate mannose synthase from the filamentous fungus Trichoderma reeseibelongs to the human and Schizosaccharomyces pombe class of the enzyme.
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- Glycobiology, 2000, v. 10, n. 10, p. 983, doi. 10.1093/glycob/10.10.983
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- Article
A design–build–test cycle using modeling and experiments reveals interdependencies between upper glycolysis and xylose uptake in recombinant S. cerevisiae and improves predictive capabilities of large-scale kinetic models.
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- Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-017-0838-5
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- Article
Whole-genome metabolic model of Trichoderma reesei built by comparative reconstruction.
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- Biotechnology for Biofuels, 2016, v. 9, p. 1, doi. 10.1186/s13068-016-0665-0
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- Article
Genome wide analysis of protein production load in Trichoderma reesei.
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- Biotechnology for Biofuels, 2016, v. 9, p. 1, doi. 10.1186/s13068-016-0547-5
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- Article
Low oxygen levels as a trigger for enhancement of respiratory metabolism in Saccharomyces cerevisiae.
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- BMC Genomics, 2009, v. 10, p. 461, doi. 10.1186/1471-2164-10-461
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Strain design optimization using reinforcement learning.
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- PLoS Computational Biology, 2022, v. 18, n. 6, p. 1, doi. 10.1371/journal.pcbi.1010177
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- Article
NordAqua, a Nordic Center of Excellence to develop an algae‐based photosynthetic production platform.
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- Physiologia Plantarum, 2021, v. 173, n. 2, p. 507, doi. 10.1111/ppl.13394
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- Article
A novel, small endoglucanase gene, <em>egl5</em>, from <em>Trichoderma reesei</em> isolated by expression in yeast.
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- Molecular Microbiology, 1994, v. 13, n. 2, p. 219, doi. 10.1111/j.1365-2958.1994.tb00417.x
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- Article
Xylanase XYN IV from Trichoderma reesei showing exo- and endo-xylanase activity.
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- FEBS Journal, 2013, v. 280, n. 1, p. 285, doi. 10.1111/febs.12069
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- Article
Dynamic flux balance analysis of the metabolism of Saccharomyces cerevisiae during the shift from fully respirative or respirofermentative metabolic states to anaerobiosis.
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- FEBS Journal, 2012, v. 279, n. 18, p. 3338, doi. 10.1111/j.1742-4658.2012.08649.x
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- Article
Identification in the yeast Pichia stipitis of the firstl-rhamnose-1-dehydrogenase gene.
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- FEBS Journal, 2008, v. 275, n. 10, p. 2482, doi. 10.1111/j.1742-4658.2008.06392.x
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- Article
Enzymes for the NADPH-dependent reduction of dihydroxyacetone andD-glyceraldehyde andL-glyceraldehyde in the mould Hypocrea jecorina.
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- FEBS Journal, 2006, v. 273, n. 18, p. 4229, doi. 10.1111/j.1742-4658.2006.05423.x
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- Article
Comparative Genome-Scale Reconstruction of Gapless Metabolic Networks for Present and Ancestral Species.
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- PLoS Computational Biology, 2014, v. 10, n. 2, p. 1, doi. 10.1371/journal.pcbi.1003465
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- Article
Molecular and Functional Characterization of an Invertase Secreted by Ashbya gossypii.
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- Molecular Biotechnology, 2014, v. 56, n. 6, p. 524, doi. 10.1007/s12033-013-9726-9
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- Article
Materials Inspired by Living Functions.
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- Advanced Functional Materials, 2024, v. 34, n. 37, p. 1, doi. 10.1002/adfm.202402097
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- Article
Production of d-lactic acid containing polyhydroxyalkanoate polymers in yeast Saccharomyces cerevisiae.
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- Journal of Industrial Microbiology & Biotechnology, 2021, v. 48, n. 5/6, p. 1, doi. 10.1093/jimb/kuab028
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- Article
Evaluation of synthetic formaldehyde and methanol assimilation pathways in Yarrowia lipolytica.
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- Fungal Biology & Biotechnology, 2019, v. 6, n. 1, p. 1, doi. 10.1186/s40694-019-0090-9
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- Article
Screening of candidate regulators for cellulase and hemicellulase production in Trichoderma reesei and identification of a factor essential for cellulase production.
- Published in:
- Biotechnology for Biofuels, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1754-6834-7-14
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- Article
Use of matrix-assisted laser desorption/ionization time-of-flight mass mapping and nanospray liquid chromatography/electrospray ionization tandem mass spectrometry sequence tag analysis for high sensitivity identification of yeast proteins separated by two-dimensional gel electrophoresis
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- Rapid Communications in Mass Spectrometry: RCM, 2001, v. 15, n. 18, p. 1685, doi. 10.1002/rcm.424
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- Article
PHB production from cellobiose with Saccharomyces cerevisiae.
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- Microbial Cell Factories, 2022, v. 21, n. 1, p. 1, doi. 10.1186/s12934-022-01845-x
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- Article
Bioprocess performance analysis of novel methanol-independent promoters for recombinant protein production with Pichia pastoris.
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- Microbial Cell Factories, 2021, v. 20, n. 1, p. 1, doi. 10.1186/s12934-021-01564-9
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- Article
Nutritional requirements and strain heterogeneity in Ashbya gossypii.
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- Journal of Basic Microbiology, 2012, v. 52, n. 5, p. 582, doi. 10.1002/jobm.201100383
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- Article
Trichoderma reesei rho3, a homologue of yeast RHO3, suppresses the growth defect of yeast sec15-1 mutation.
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- Current Genetics, 2001, v. 40, n. 2, p. 119, doi. 10.1007/s002940100245
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- Article
Overexpression of PAD1 and FDC1 results in significant cinnamic acid decarboxylase activity in Saccharomyces cerevisiae.
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- AMB Express, 2015, v. 5, n. 1, p. 1, doi. 10.1186/s13568-015-0103-x
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- Article
Machine Learning of Protein Interactions in Fungal Secretory Pathways.
- Published in:
- PLoS ONE, 2016, v. 11, n. 7, p. 1, doi. 10.1371/journal.pone.0159302
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- Article