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A random-walk-based epidemiological model.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-98211-5
By:
- Chu, Andrew;
- Huber, Greg;
- McGeever, Aaron;
- Veytsman, Boris;
- Yllanes, David
Publication type:
Article
A high-resolution flux-matrix model describes the spread of diseases in a spatial network and the effect of mitigation strategies.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-19931-w
By:
- Le Treut, Guillaume;
- Huber, Greg;
- Kamb, Mason;
- Kawagoe, Kyle;
- McGeever, Aaron;
- Miller, Jonathan;
- Pnini, Reuven;
- Veytsman, Boris;
- Yllanes, David
Publication type:
Article
Leveraging the Cell Ontology to classify unseen cell types.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25725-x
By:
- Wang, Sheng;
- Pisco, Angela Oliveira;
- McGeever, Aaron;
- Brbic, Maria;
- Zitnik, Marinka;
- Darmanis, Spyros;
- Leskovec, Jure;
- Karkanias, Jim;
- Altman, Russ B.
Publication type:
Article
Metagenomic prediction of antimicrobial resistance in critically ill patients with lower respiratory tract infections.
Published in:
Genome Medicine, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13073-022-01072-4
By:
- Serpa, Paula Hayakawa;
- Deng, Xianding;
- Abdelghany, Mazin;
- Crawford, Emily;
- Malcolm, Katherine;
- Caldera, Saharai;
- Fung, Monica;
- McGeever, Aaron;
- Kalantar, Katrina L.;
- Lyden, Amy;
- Ghale, Rajani;
- Deiss, Thomas;
- Neff, Norma;
- Miller, Steven A.;
- Doernberg, Sarah B.;
- Chiu, Charles Y.;
- DeRisi, Joseph L.;
- Calfee, Carolyn S.;
- Langelier, Charles R.
Publication type:
Article
Metagenomic prediction of antimicrobial resistance in critically ill patients with lower respiratory tract infections.
Published in:
Genome Medicine, 2022, v. 14, p. 1, doi. 10.1186/s13073-022-01072-4
By:
- Serpa, Paula Hayakawa;
- Deng, Xianding;
- Abdelghany, Mazin;
- Crawford, Emily;
- Malcolm, Katherine;
- Caldera, Saharai;
- Fung, Monica;
- McGeever, Aaron;
- Kalantar, Katrina L.;
- Lyden, Amy;
- Ghale, Rajani;
- Deiss, Thomas;
- Neff, Norma;
- Miller, Steven A.;
- Doernberg, Sarah B.;
- Chiu, Charles Y.;
- DeRisi, Joseph L.;
- Calfee, Carolyn S.;
- Langelier, Charles R.
Publication type:
Article
Functional Enrichment and Analysis of Antigen-Specific Memory B Cell Antibody Repertoires in PBMCs.
Published in:
Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.01452
By:
- Waltari, Eric;
- McGeever, Aaron;
- Friedland, Natalia;
- Kim, Peter S.;
- McCutcheon, Krista M.
Publication type:
Article
Estimation of Secondary Household Attack Rates for Emergent Spike L452R Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants Detected by Genomic Surveillance at a Community-Based Testing Site in San Francisco.
Published in:
Clinical Infectious Diseases, 2022, v. 74, n. 1, p. 32, doi. 10.1093/cid/ciab283
By:
- Peng, James;
- Liu, Jamin;
- Mann, Sabrina A;
- Mitchell, Anthea M;
- Laurie, Matthew T;
- Sunshine, Sara;
- Pilarowski, Genay;
- Ayscue, Patrick;
- Kistler, Amy;
- Vanaerschot, Manu;
- Li, Lucy M;
- McGeever, Aaron;
- Chow, Eric D;
- Marquez, Carina;
- Nakamura, Robert;
- Rubio, Luis;
- Chamie, Gabriel;
- Jones, Diane;
- Jacobo, Jon;
- Rojas, Susana
Publication type:
Article
FLASH: a next-generation CRISPR diagnostic for multiplexed detection of antimicrobial resistance sequences.
Published in:
Nucleic Acids Research, 2019, v. 47, n. 14, p. e83, doi. 10.1093/nar/gkz418
By:
- Quan, Jenai;
- Langelier, Charles;
- Kuchta, Alison;
- Batson, Joshua;
- Teyssier, Noam;
- Lyden, Amy;
- Caldera, Saharai;
- McGeever, Aaron;
- Dimitrov, Boris;
- King, Ryan;
- Wilheim, Jordan;
- Murphy, Maxwell;
- Ares, Lara Pesce;
- Travisano, Katherine A;
- Sit, Rene;
- Amato, Roberto;
- Mumbengegwi, Davis R;
- Smith, Jennifer L;
- Bennett, Adam;
- Gosling, Roly
Publication type:
Article

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