Works by Marra, Marco

Results: 193

Hand movements in Mild Cognitive Impairment: clinical implications and insights for future research.

Published in:

Journal of Integrative Neuroscience, 2022, v. 21, n. 2, p. 1, doi. 10.31083/j.jin2102067

By:

Ilardi, Ciro Rosario;
Iavarone, Alessandro;
La Marra, Marco;
Iachini, Tina;
Chieffi, Sergio

Publication type:

Article

Chemokine expression predicts T cell-inflammation and improved survival with checkpoint inhibition across solid cancers.

Published in:

NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00428-2

By:

Romero, Joan Miguel;
Titmuss, Emma;
Wang, Yifan;
Vafiadis, James;
Pacis, Alain;
Jang, Gun Ho;
Zhang, Amy;
Golesworthy, Bryn;
Lenko, Tatiana;
Williamson, Laura M.;
Grünwald, Barbara;
O'Kane, Grainne M.;
Jones, Steven J. M.;
Marra, Marco. A.;
Wilson, Julie M.;
Gallinger, Steven;
Laskin, Janessa;
Zogopoulos, George

Publication type:

Article

Chemokine expression predicts T cell-inflammation and improved survival with checkpoint inhibition across solid cancers.

Published in:

NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00428-2

By:

Romero, Joan Miguel;
Titmuss, Emma;
Wang, Yifan;
Vafiadis, James;
Pacis, Alain;
Jang, Gun Ho;
Zhang, Amy;
Golesworthy, Bryn;
Lenko, Tatiana;
Williamson, Laura M.;
Grünwald, Barbara;
O'Kane, Grainne M.;
Jones, Steven J. M.;
Marra, Marco. A.;
Wilson, Julie M.;
Gallinger, Steven;
Laskin, Janessa;
Zogopoulos, George

Publication type:

Article

Homologous recombination deficiency signatures in gastrointestinal and thoracic cancers correlate with platinum therapy duration.

Published in:

NPJ Precision Oncology, 2023, v. 7, n. 1, p. 1, doi. 10.1038/s41698-023-00368-x

By:

Tsang, Erica S.;
Csizmok, Veronika;
Williamson, Laura M.;
Pleasance, Erin;
Topham, James T.;
Karasinska, Joanna M.;
Titmuss, Emma;
Schrader, Intan;
Yip, Stephen;
Tessier-Cloutier, Basile;
Mungall, Karen;
Ng, Tony;
Sun, Sophie;
Lim, Howard J.;
Loree, Jonathan M.;
Laskin, Janessa;
Marra, Marco A.;
Jones, Steven J. M.;
Schaeffer, David F.;
Renouf, Daniel J.

Publication type:

Article

DIFFERENTIAL HIVE PLOTS: SEEING NETWORKS CHANGE.

Published in:

Leonardo, 2017, v. 50, n. 5, p. 504, doi. 10.1162/LEON_a_01278

By:

Krzywinski, Martin;
Ka Ming Nip;
Birol, Inanc;
Marra, Marco

Publication type:

Article

Matching methods in precision oncology: An introduction and illustrative example.

Published in:

Molecular Genetics & Genomic Medicine, 2021, v. 9, n. 1, p. 1, doi. 10.1002/mgg3.1554

By:

Weymann, Deirdre;
Laskin, Janessa;
Jones, Steven J.M.;
Lim, Howard;
Renouf, Daniel J.;
Roscoe, Robyn;
Schrader, Kasmintan A.;
Sun, Sophie;
Yip, Stephen;
Marra, Marco A.;
Regier, Dean A.

Publication type:

Article

The cost and cost trajectory of whole-genome analysis guiding treatment of patients with advanced cancers.

Published in:

Molecular Genetics & Genomic Medicine, 2017, v. 5, n. 3, p. 251, doi. 10.1002/mgg3.281

By:

Weymann, Deirdre;
Laskin, Janessa;
Roscoe, Robyn;
Schrader, Kasmintan A.;
Chia, Stephen;
Yip, Stephen;
Cheung, Winson Y.;
Gelmon, Karen A.;
Karsan, Aly;
Renouf, Daniel J.;
Marra, Marco;
Regier, Dean A.

Publication type:

Article

Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4549, doi. 10.1093/nar/gkn382

By:

Wederell, Elizabeth D.;
Bilenky, Mikhail;
Cullum, Rebecca;
Thiessen, Nina;
Dagpinar, Melis;
Delaney, Allen;
Varhol, Richard;
Zhao, YongJun;
Zeng, Thomas;
Bernier, Bridget;
Ingham, Matthew;
Hirst, Martin;
Robertson, Gordon;
Marra, Marco A.;
Jones, Steven;
Hoodless, Pamela A.

Publication type:

Article

Sequence biases in large scale gene expression profiling data.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 12, p. e83, doi. 10.1093/nar/gkl404

By:

Siddiqui, Asim S.;
Delaney, Allen D.;
Schnerch, Angelique;
Griffith, Obi L.;
Jones, Steven J. M.;
Marra, Marco A.

Publication type:

Article

Systematic sequencing of cDNA clones using the transposon Tn5.

Published in:

Nucleic Acids Research, 2002, v. 30, n. 11, p. 2469, doi. 10.1093/nar/30.11.2469

By:

Shevchenko, Yuriy;
Bouffard, Gerard G.;
Butterfield, Yaron S. N.;
Blakesley, Robert W.;
Hartley, James L.;
Young, Alice C.;
Marra, Marco A.;
Jones, Steven J. M.;
Touchman, Jeffrey W.;
Green, Eric D.

Publication type:

Article

An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones.

Published in:

Nucleic Acids Research, 2002, v. 30, n. 11, p. 2460, doi. 10.1093/nar/30.11.2460

By:

Butterfield, Yaron S. N.;
Marra, Marco A.;
Asano, Jennifer K.;
Chan, Susanna Y.;
Guin, Ranabir;
Krzywinski, Martin I.;
Lee, Soo Sen;
MacDonald, Kim W. K.;
Mathewson, Carrie A.;
Olson, Teika E.;
Pandoh, Pawan K.;
Prabhu, Anna-Liisa;
Schnerch, Angelique;
Skalska, Ursula;
Smailus, Duane E.;
Stott, Jeff M.;
Tsai, Miranda I.;
Yang, George S.;
Zuyderduyn, Scott D.;
Schein, Jacqueline E.

Publication type:

Article

High-throughput plasmid DNA purification for 3 cents per sample.

Published in:

Nucleic Acids Research, 1999, v. 27, n. 24, p. e37, doi. 10.1093/nar/27.24.e37

By:

Marra, Marco A.;
Kucaba, Tamara A.;
Hillier, LaDeana W.;
Waterston, Robert H.

Publication type:

Article

Multi-Omic Analysis of CIC's Functional Networks Reveals Novel Interaction Partners and a Potential Role in Mitotic Fidelity.

Published in:

Cancers, 2023, v. 15, n. 10, p. 2805, doi. 10.3390/cancers15102805

By:

Takemon, Yuka;
LeBlanc, Véronique G.;
Song, Jungeun;
Chan, Susanna Y.;
Lee, Stephen Dongsoo;
Trinh, Diane L.;
Ahmad, Shiekh Tanveer;
Brothers, William R.;
Corbett, Richard D.;
Gagliardi, Alessia;
Moradian, Annie;
Cairncross, J. Gregory;
Yip, Stephen;
Aparicio, Samuel A. J. R.;
Chan, Jennifer A.;
Hughes, Christopher S.;
Morin, Gregg B.;
Gorski, Sharon M.;
Chittaranjan, Suganthi;
Marra, Marco A.

Publication type:

Article

The Drivers, Mechanisms, and Consequences of Genome Instability in HPV-Driven Cancers.

Published in:

Cancers, 2022, v. 14, n. 19, p. 4623, doi. 10.3390/cancers14194623

By:

Porter, Vanessa L.;
Marra, Marco A.

Publication type:

Article

Cost-Effectiveness of Molecularly Guided Treatment in Diffuse Large B-Cell Lymphoma (DLBCL) in Patients under 60.

Published in:

Cancers, 2022, v. 14, n. 4, p. 908, doi. 10.3390/cancers14040908

By:

Regier, Dean A.;
Chan, Brandon;
Costa, Sarah;
Scott, David W.;
Steidl, Christian;
Connors, Joseph M.;
Karsan, Aly;
Marra, Marco A.;
Kridel, Robert;
Cromwell, Ian;
Pollard, Samantha

Publication type:

Article

Comprehensive miRNA sequence analysis reveals survival differences in diffuse large B-cell lymphoma patients.

Published in:

Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-014-0568-y

By:

Lim, Emilia L.;
Trinh, Diane L.;
Scott, David W.;
Chu, Andy;
Krzywinski, Martin;
Yongjun Zhao;
Robertson, A. Gordon;
Mungall, Andrew J.;
Schein, Jacqueline;
Boyle, Merrill;
Mottok, Anja;
Ennishi, Daisuke;
Johnson, Nathalie A.;
Steidl, Christian;
Connors, Joseph M.;
Morin, Ryan D.;
Gascoyne, Randy D.;
Marra, Marco A.

Publication type:

Article

Integrative multi‐omic analysis reveals neurodevelopmental gene dysregulation in CIC‐knockout and IDH1‐mutant cells.

Published in:

Journal of Pathology, 2022, v. 256, n. 3, p. 297, doi. 10.1002/path.5835

By:

Lee, Stephen D;
Song, Jungeun;
LeBlanc, Veronique G;
Marra, Marco A

Publication type:

Article

Whole‐slide laser microdissection for tumour enrichment.

Published in:

Journal of Pathology, 2021, v. 253, n. 2, p. 225, doi. 10.1002/path.5575

By:

Coope, Robin JN;
Schlosser, Colin;
Corbett, Richard D;
Pleasance, Stephen;
Tessier‐Cloutier, Basile;
Pandoh, Pawan;
Kirk, Heather;
Haile, Simon;
Zhao, Yongjun;
Mungall, Andrew J;
Marra, Marco A

Publication type:

Article

Integrative genomic analysis of matched primary and metastatic pediatric osteosarcoma.

Published in:

Journal of Pathology, 2019, v. 249, n. 3, p. 319, doi. 10.1002/path.5319

By:

Negri, Gian Luca;
Grande, Bruno M;
Delaidelli, Alberto;
El‐Naggar, Amal;
Cochrane, Dawn;
Lau, Ching C;
Triche, Timothy J;
Moore, Richard A;
Jones, Steven JM;
Montpetit, Alexandre;
Marra, Marco A;
Malkin, David;
Morin, Ryan D;
Sorensen, Poul H

Publication type:

Article

DNA hypermethylation and 1p Loss silence NHE-1 in oligodendroglioma.

Published in:

Annals of Neurology, 2012, v. 71, n. 6, p. 845, doi. 10.1002/ana.23610

By:

Blough, Michael D.;
Al-Najjar, Mohammad;
Chesnelong, Charles;
Binding, Carmen E.;
Rogers, Alexandra D.;
Luchman, H. Artee;
Kelly, John J.;
Fliegel, Larry;
Morozova, Olena;
Yip, Stephen;
Marra, Marco;
Weiss, Samuel;
Chan, Jennifer A.;
Cairncross, J. Gregory

Publication type:

Article

Sequencing Strategies to Guide Decision Making in Cancer Treatment.

Published in:

2016

By:

Topham, James T.;
Marra, Marco A.

Publication type:

journal article

Hive plots—rational approach to visualizing networks.

Published in:

Briefings in Bioinformatics, 2012, v. 13, n. 5, p. 627, doi. 10.1093/bib/bbr069

By:

Krzywinski, Martin;
Birol, Inanc;
Jones, Steven JM;
Marra, Marco A

Publication type:

Article

Functional Characteristics and Coping Strategies among Rugby Athletes: A Cluster Analysis Approach.

Published in:

Journal of Personalized Medicine, 2024, v. 14, n. 3, p. 292, doi. 10.3390/jpm14030292

By:

Sapuppo, Walter;
Giacconi, Davide;
Monda, Vincenzo;
Messina, Antonietta;
Allocca, Salvatore;
Chieffi, Sergio;
Ricci, Mariateresa;
Villano, Ines;
Saccenti, Daniele;
Mineo, Claudia Maria;
Boltri, Margherita;
Monda, Marcellino;
Di Maio, Girolamo;
Monda, Antonietta;
La Marra, Marco

Publication type:

Article

Selective targeting of neuroblastoma tumour-initiating cells by compounds identified in stem cell-based small molecule screens.

Published in:

EMBO Molecular Medicine, 2010, v. 2, n. 9, p. 371, doi. 10.1002/emmm.201000093

By:

Smith, Kristen M.;
Datti, Alessandro;
Fujitani, Mayumi;
Grinshtein, Natalie;
Zhang, Libo;
Morozova, Olena;
Blakely, Kim M.;
Rotenberg, Susan A.;
Hansford, Loen M.;
Miller, Freda D.;
Yeger, Herman;
Irwin, Meredith S.;
Moffat, Jason;
Marra, Marco A.;
Baruchel, Sylvain;
Wrana, Jeffrey L.;
Kaplan, David R.

Publication type:

Article

Comparative transcriptome analysis of isogenic cell line models and primary cancers links capicua ( CIC) loss to activation of the MAPK signalling cascade.

Published in:

Journal of Pathology, 2017, v. 242, n. 2, p. 206, doi. 10.1002/path.4894

By:

LeBlanc, Veronique G;
Firme, Marlo;
Song, Jungeun;
Chan, Susanna Y;
Lee, Min Hye;
Yip, Stephen;
Chittaranjan, Suganthi;
Marra, Marco A

Publication type:

Article

Multifocal endometriotic lesions associated with cancer are clonal and carry a high mutation burden.

Published in:

Journal of Pathology, 2015, v. 236, n. 2, p. 201, doi. 10.1002/path.4516

By:

Anglesio, Michael S;
Bashashati, Ali;
Wang, Yi Kan;
Senz, Janine;
Ha, Gavin;
Yang, Winnie;
Aniba, Mohamed R;
Prentice, Leah M;
Farahani, Hossein;
Li Chang, Hector;
Karnezis, Anthony N;
Marra, Marco A;
Yong, Paul J;
Hirst, Martin;
Gilks, Blake;
Shah, Sohrab P;
Huntsman, David G

Publication type:

Article

Recurrent genomic rearrangements in primary testicular lymphoma.

Published in:

Journal of Pathology, 2015, v. 236, n. 2, p. 136, doi. 10.1002/path.4522

By:

Twa, David DW;
Mottok, Anja;
Chan, Fong Chun;
Ben‐Neriah, Susana;
Woolcock, Bruce W;
Tan, King L;
Mungall, Andrew J;
McDonald, Helen;
Zhao, Yongjun;
Lim, Raymond S;
Nelson, Brad H;
Milne, Katy;
Shah, Sohrab P;
Morin, Ryan D;
Marra, Marco A;
Scott, David W;
Gascoyne, Randy D;
Steidl, Christian

Publication type:

Article

Distinct evolutionary trajectories of primary high-grade serous ovarian cancers revealed through spatial mutational profiling.

Published in:

Journal of Pathology, 2013, v. 231, n. 1, p. 21, doi. 10.1002/path.4230

By:

Bashashati, Ali;
Ha, Gavin;
Tone, Alicia;
Ding, Jiarui;
Prentice, Leah M;
Roth, Andrew;
Rosner, Jamie;
Shumansky, Karey;
Kalloger, Steve;
Senz, Janine;
Yang, Winnie;
McConechy, Melissa;
Melnyk, Nataliya;
Anglesio, Michael;
Luk, Margaret TY;
Tse, Kane;
Zeng, Thomas;
Moore, Richard;
Zhao, Yongjun;
Marra, Marco A

Publication type:

Article

Using next-generation sequencing for the diagnosis of rare disorders: a family with retinitis pigmentosa and skeletal abnormalities.

Published in:

Journal of Pathology, 2011, v. 225, n. 1, p. 12, doi. 10.1002/path.2941

By:

Schrader, Kasmintan A;
Heravi-Moussavi, Alireza;
Waters, Paula J;
Senz, Janine;
Whelan, James;
Ha, Gavin;
Eydoux, Patrice;
Nielsen, Torsten;
Gallagher, Barry;
Oloumi, Arusha;
Boyd, Niki;
Fernandez, Bridget A;
Young, Terry-Lynn;
Jones, Steven JM;
Hirst, Martin;
Shah, Sohrab P;
Marra, Marco A;
Green, Jane;
Huntsman, David G

Publication type:

Article

Integration of Whole-Genome Sequencing With Circulating Tumor DNA Analysis Captures Clonal Evolution and Tumor Heterogeneity in Non-V600 BRAF Mutant Colorectal Cancer.

Published in:

2020

By:

Mendis, Shehara;
Alcaide, Miguel;
Topham, James T.;
Johnson, Benny;
Morin, Ryan D.;
Chu, Jenny;
Bosdet, Ian;
Kopetz, Scott;
Karsan, Aly;
Gill, Sharlene;
Laskin, Janessa;
Jones, Steven J. M.;
Marra, Marco A.;
Schaeffer, David F.;
Renouf, Daniel J.;
Loree, Jonathan M.

Publication type:

journal article

Combined serial analysis of gene expression and transcription factor binding site prediction identifies novel-candidate-target genes of Nr2e1 in neocortex development.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1770-3

By:

Schmouth, Jean-François;
Arenillas, David;
Corso-Díaz, Ximena;
Yuan-Yun Xie;
Bohacec, Slavita;
Banks, Kathleen G.;
Bonaguro, Russell J.;
Wong, Siaw H.;
Jones, Steven J. M.;
Marra, Marco A.;
Simpson, Elizabeth M.;
Wasserman, Wyeth W.

Publication type:

Article

Combined serial analysis of gene expression and transcription factor binding site prediction identifies novel-candidate-target genes of Nr2e1 in neocortex development

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 545, doi. 10.1186/s12864-015-1770-3

By:

Schmouth, Jean-François;
Arenillas, David;
Corso-Díaz, Ximena;
Xie, Yuan-Yun;
Bohacec, Slavita;
Banks, Kathleen G.;
Bonaguro, Russell J.;
Wong, Siaw H.;
Jones, Steven J. M.;
Marra, Marco A.;
Simpson, Elizabeth M.;
Wasserman, Wyeth W.

Publication type:

Article

Transcriptome analysis for Caenorhabditis elegans based on novel expressed sequence tags.

Published in:

BMC Biology, 2008, v. 6, p. 1, doi. 10.1186/1741-7007-6-30

By:

Heesun Shin;
Hirst, Martin;
Bainbridge, Matthew N.;
Magrini, Vincent;
Mardis, Elaine;
Moerman, Donald G;
Marra, Marco A.;
Baillie, David L.;
Jones, Steven J. M.

Publication type:

Article

deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 5, p. 1, doi. 10.1371/journal.pcbi.1001138

By:

McPherson, Andrew;
Hormozdiari, Fereydoun;
Zayed, Abdalnasser;
Giuliany, Ryan;
Ha, Gavin;
Sun, Mark G. F.;
Griffith, Malachi;
Moussavi, Alireza Heravi;
Janine6Senz;
Melnyk, Nataliya;
Pacheco, Marina;
Marra, Marco A.;
Hirst, Martin;
Nielsen, Torsten O.;
Sahinalp, S. Cenk;
Huntsman, David;
Shah, Sohrab P.

Publication type:

Article

Caspase 3 and caspase 7 promote cytoprotective autophagy and the DNA damage response during non-lethal stress conditions in human breast cancer cells.

Published in:

PLoS Biology, 2025, v. 23, n. 2, p. 1, doi. 10.1371/journal.pbio.3003034

By:

Samarasekera, Gayathri;
Go, Nancy E.;
Choutka, Courtney;
Xu, Jing;
Takemon, Yuka;
Chan, Jennifer;
Chan, Michelle;
Perera, Shivani;
Aparicio, Samuel;
Morin, Gregg B.;
Marra, Marco A.;
Chittaranjan, Suganthi;
Gorski, Sharon M.

Publication type:

Article

Age-related differences in distractor interference on line bisection.

Published in:

Experimental Brain Research, 2014, v. 232, n. 11, p. 3659, doi. 10.1007/s00221-014-4056-0

By:

Chieffi, Sergio;
Iavarone, Alessandro;
Iaccarino, Leonardo;
Marra, Marco;
Messina, Giovanni;
Luca, Vincenzo;
Monda, Marcellino

Publication type:

Article

The expression level of small non-coding RNAs derived from the first exon of protein-coding genes is predictive of cancer status.

Published in:

EMBO Reports, 2014, v. 15, n. 4, p. 402, doi. 10.1002/embr.201337950

By:

Zovoilis, Athanasios;
Mungall, Andrew J;
Moore, Richard;
Varhol, Richard;
Chu, Andy;
Wong, Tina;
Marra, Marco;
Jones, Steven JM

Publication type:

Article

Application of a Neural Network Whole Transcriptome–Based Pan-Cancer Method for Diagnosis of Primary and Metastatic Cancers.

Published in:

JAMA Network Open, 2019, v. 2, n. 4, p. e192597, doi. 10.1001/jamanetworkopen.2019.2597

By:

Grewal, Jasleen K.;
Tessier-Cloutier, Basile;
Jones, Martin;
Gakkhar, Sitanshu;
Ma, Yussanne;
Moore, Richard;
Mungall, Andrew J.;
Zhao, Yongjun;
Taylor, Michael D.;
Gelmon, Karen;
Lim, Howard;
Renouf, Daniel;
Laskin, Janessa;
Marra, Marco;
Yip, Stephen;
Jones, Steven J. M.

Publication type:

Article

Ultra-Processed Food Intake and Increased Risk of Obesity: A Narrative Review.

Published in:

Foods, 2024, v. 13, n. 16, p. 2627, doi. 10.3390/foods13162627

By:

Monda, Antonietta;
de Stefano, Maria Ida;
Villano, Ines;
Allocca, Salvatore;
Casillo, Maria;
Messina, Antonietta;
Monda, Vincenzo;
Moscatelli, Fiorenzo;
Dipace, Anna;
Limone, Pierpaolo;
Di Maio, Girolamo;
La Marra, Marco;
Di Padova, Marilena;
Chieffi, Sergio;
Messina, Giovanni;
Monda, Marcellino;
Polito, Rita

Publication type:

Article

Integrated genomics elucidates relative spatial homogeneity of embryonal brain tumors.

Published in:

2015

By:

Remke, Marc;
Cavalli, Florence;
Morrissy, A;
Ramaswamy, Vijay;
Jones, David;
Packer, Roger;
Bouffet, Eric;
Bader, Gary;
Borkhardt, Arndt;
Pfister, Stefan;
Jabado, Nada;
Marra, Marco;
Taylor, Michael

Publication type:

Abstract

Biomechanical Consequences of Tibial Insert Thickness after Total Knee Arthroplasty: A Musculoskeletal Simulation Study.

Published in:

Applied Sciences (2076-3417), 2021, v. 11, n. 5, p. 2423, doi. 10.3390/app11052423

By:

Tzanetis, Periklis;
Marra, Marco A.;
Fluit, René;
Koopman, Bart;
Verdonschot, Nico;
Frigo, Carlo Albino

Publication type:

Article

Generation of a wheat leaf rust, Puccinia triticina, EST database from stage-specific cDNA libraries.

Published in:

Molecular Plant Pathology, 2007, v. 8, n. 4, p. 451, doi. 10.1111/j.1364-3703.2007.00406.x

By:

GUANGGAN HU;
LINNING, ROB;
MCCALLUM, BRENT;
BANKS, TRAVIS;
CLOUTIER, SYLVIE;
BUTTERFIELD, YARON;
LIU, JERRY;
KIRKPATRICK, ROBERT;
STOTT, JEFF;
YANG, GEORGE;
SMAILUS, DUANE;
JONES, STEVEN;
MARRA, MARCO;
SCHEIN, JACQUELINE;
BAKKEREN, GUUS

Publication type:

Article

TMBur: a distributable tumor mutation burden approach for whole genome sequencing.

Published in:

BMC Medical Genomics, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s12920-022-01348-z

By:

Titmuss, Emma;
Corbett, Richard D.;
Davidson, Scott;
Abbasi, Sanna;
Williamson, Laura M.;
Pleasance, Erin D.;
Shlien, Adam;
Renouf, Daniel J.;
Jones, Steven J. M.;
Laskin, Janessa;
Marra, Marco A.

Publication type:

Article

Exploration of Germline Correlates and Risk of Immune-Related Adverse Events in Advanced Cancer Patients Treated with Immune Checkpoint Inhibitors.

Published in:

Current Oncology, 2024, v. 31, n. 4, p. 1865, doi. 10.3390/curroncol31040140

By:

Titmuss, Emma;
Yu, Irene S.;
Pleasance, Erin D.;
Williamson, Laura M.;
Mungall, Karen;
Mungall, Andrew J.;
Renouf, Daniel J.;
Moore, Richard;
Jones, Steven J. M.;
Marra, Marco A.;
Laskin, Janessa J.;
Savage, Kerry J.

Publication type:

Article

From cytogenetics to next-generation sequencing technologies: advances in the detection of genome rearrangements in tumors.

Published in:

Biochemistry & Cell Biology, 2008, v. 86, n. 2, p. 81, doi. 10.1139/O08-003

By:

Morozova, Olena;
Marra, Marco A.

Publication type:

Article

A Modified Polymerase Chain Reaction-Long Serial Analysis of Gene Expression Protocol Identifies Novel Transcripts in Human CD34<sup>+</sup> Bone Marrow Cells.

Published in:

Stem Cells, 2007, v. 25, n. 7, p. 1681, doi. 10.1634/stemcells.2006-0794

By:

Yun Zhao;
Raouf, Afshin;
Kent, David;
Khattra, Jaswinder;
Delaney, Allen;
Schnerch, Angelique;
Asano, Jennifer;
McDonald, Helen;
Chan, Christina;
Jones, Steven;
Marra, Marco A.;
Eaves, Connie J.

Publication type:

Article

A tiling resolution DNA microarray with complete coverage of the human genome.

Published in:

Nature Genetics, 2004, v. 36, n. 3, p. 299, doi. 10.1038/ng1307

By:

Ishkanian, Adrian S.;
Malloff, Chad A.;
Watson, Spencer K.;
J de Leeuw, Ronald;
Chi, Bryan;
Coe, Bradley P.;
Snijders, Antoine;
Albertson, Donna G.;
Pinkel, Daniel;
Marra, Marco A.;
Ling, Victor;
MacAulay, Calum;
Lam, Wan L.

Publication type:

Article

An SSLP marker?anchored BAC framework map of the mouse genome.

Published in:

Nature Genetics, 2001, v. 29, n. 2, p. 133, doi. 10.1038/ng1001-133

By:

Cai, Wei-Wen;
Chow, Chi-Wan;
Damani, Shamsha;
Gregory, Simon G.;
Marra, Marco;
Bradley, Allan

Publication type:

Article

A map for sequence analysis of the Arabidopsis thaliana genome.

Published in:

Nature Genetics, 1999, v. 22, n. 3, p. 265, doi. 10.1038/10327

By:

Marra, Marco;
Kucaba, Tamara;
Sekhon, Mandeep;
Hillier, LaDeana;
Martienssen, Robert;
Chinwalla, Asif;
Crockett, Jye'mon;
Fedele, Jacqueline;
Grover, Heather;
Gund, Christopher;
McCombie, W. Richard;
McDonald, Ken;
McPherson, John;
Mudd, Nancy;
Parnell, Larry;
Schein, Jacqueline;
Seim, Ryan;
Shelby, Proteon;
Waterston, Robert

Publication type:

Article

A complete BAC-based physical map of the Arabidopsis thaliana genome.

Published in:

Nature Genetics, 1999, v. 22, n. 3, p. 271, doi. 10.1038/10334

By:

Mozo, Teresa;
Dewar, Ken;
Dunn, Pat;
Ecker, Joseph R.;
Fischer, Sabine;
Kloska, Sebastian;
Lehrach, Hans;
Marra, Marco;
Martienssen, Robert;
Meier-Ewert, Sebastian;
Altmann, Thomas

Publication type:

Article