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A nucleotide substitution model with nearest-neighbour interactions.
- Published in:
- Bioinformatics, 2004, v. 20, n. suppl_1, p. i216, doi. 10.1093/bioinformatics/bth901
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- Publication type:
- Article
A nucleotide substitution model with nearest-neighbour interactions.
- Published in:
- Bioinformatics, 2004, v. 20, p. i216, doi. 10.1093/bioinformatics/bth901
- By:
- Publication type:
- Article
Respiratory Syncytial Virus, Human Metapneumovirus, and Parainfluenza Virus Infections in Lung Transplant Recipients: A Systematic Review of Outcomes and Treatment Strategies.
- Published in:
- Clinical Infectious Diseases, 2022, v. 74, n. 12, p. 2252, doi. 10.1093/cid/ciab969
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- Publication type:
- Article
Improved workflows for high throughput library preparation using the transposome-based nextera system.
- Published in:
- BMC Biotechnology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1472-6750-13-104
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- Publication type:
- Article
The Diversity and Molecular Evolution of B-Cell Receptors during Infection.
- Published in:
- Molecular Biology & Evolution, 2016, v. 33, n. 5, p. 1147, doi. 10.1093/molbev/msw015
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- Publication type:
- Article
Evolutionary biology: Human brain gene wins genome race.
- Published in:
- Nature, 2006, v. 443, n. 7108, p. 149, doi. 10.1038/nature05154
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- Publication type:
- Article
Signatures of adaptive evolution within human non-coding sequence.
- Published in:
- Human Molecular Genetics, 2006, v. 15, n. 2, p. r170, doi. 10.1093/hmg/ddl182
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- Publication type:
- Article
Signatures of adaptive evolution within human non-coding sequence.
- Published in:
- Human Molecular Genetics, 2006, v. 15, n. suppl_2, p. R170, doi. 10.1093/hmg/ddl182
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- Publication type:
- Article
Neuropeptide S receptor 1 is a nonhormonal treatment target in endometriosis.
- Published in:
- Science Translational Medicine, 2021, v. 13, n. 608, p. 1, doi. 10.1126/scitranslmed.abd6469
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- Publication type:
- Article
Unsupervised learning for medical data: A review of probabilistic factorization methods.
- Published in:
- Statistics in Medicine, 2023, v. 42, n. 30, p. 5541, doi. 10.1002/sim.9924
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- Publication type:
- Article
The bonobo genome compared with the chimpanzee and human genomes.
- Published in:
- Nature, 2012, v. 486, n. 7404, p. 527, doi. 10.1038/nature11128
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- Publication type:
- Article
A Phylogenetic Codon Substitution Model for Antibody Lineages.
- Published in:
- Genetics, 2017, v. 206, n. 1, p. 417, doi. 10.1534/genetics.116.196303
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- Publication type:
- Article
Structural and non-coding variants increase the diagnostic yield of clinical whole genome sequencing for rare diseases.
- Published in:
- Genome Medicine, 2023, v. 15, n. 1, p. 1, doi. 10.1186/s13073-023-01240-0
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- Publication type:
- Article
Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications.
- Published in:
- Nature Genetics, 2014, v. 46, n. 8, p. 912, doi. 10.1038/ng.3036
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- Publication type:
- Article
8.2% of the Human Genome Is Constrained: Variation in Rates of Turnover across Functional Element Classes in the Human Lineage.
- Published in:
- PLoS Genetics, 2014, v. 10, n. 7, p. 1, doi. 10.1371/journal.pgen.1004525
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- Publication type:
- Article
Unlocking the Bottleneck in Forward Genetics Using Whole-Genome Sequencing and Identity by Descent to Isolate Causative Mutations.
- Published in:
- PLoS Genetics, 2013, v. 9, n. 1, p. 1, doi. 10.1371/journal.pgen.1003219
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- Publication type:
- Article
A New Isolation with Migration Model along Complete Genomes Infers Very Different Divergence Processes among Closely Related Great Ape Species.
- Published in:
- PLoS Genetics, 2012, v. 8, n. 12, p. 1, doi. 10.1371/journal.pgen.1003125
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- Publication type:
- Article
The Human Pancreatic Islet Transcriptome: Expression of Candidate Genes for Type 1 Diabetes and the Impact of Pro-Inflammatory Cytokines.
- Published in:
- PLoS Genetics, 2012, v. 8, n. 3, p. 1, doi. 10.1371/journal.pgen.1002552
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- Publication type:
- Article
Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model.
- Published in:
- PLoS Genetics, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pgen.1001319
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- Publication type:
- Article
Accelerated Evolution of the Prdm9 Speciation Gene across Diverse Metazoan Taxa.
- Published in:
- PLoS Genetics, 2009, v. 5, n. 12, p. 1, doi. 10.1371/journal.pgen.1000753
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- Publication type:
- Article
Genomic and Transcriptional Co-Localization of Protein- Coding and Long Non-Coding RNA Pairs in the Developing Brain.
- Published in:
- PLoS Genetics, 2009, v. 5, n. 8, p. 1, doi. 10.1371/journal.pgen.1000617
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- Publication type:
- Article
Sequencing of human genomes with nanopore technology.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09637-5
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- Publication type:
- Article
Lifestyle factors related to prevalent chronic disease multimorbidity: A population-based cross-sectional study.
- Published in:
- PLoS ONE, 2023, v. 18, n. 7, p. 1, doi. 10.1371/journal.pone.0287263
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- Publication type:
- Article
Inferring B cell specificity for vaccines using a Bayesian mixture model.
- Published in:
- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6571-7
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- Publication type:
- Article
Investigating selection on viruses: a statistical alignment approach.
- Published in:
- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-304
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- Publication type:
- Article
Bayesian coestimation of phylogeny and sequence alignment.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 83, doi. 10.1186/1471-2105-6-83
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- Publication type:
- Article
Dog as an Outgroup to Human and Mouse.
- Published in:
- 2007
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- Publication type:
- Letter
Genome-Wide Identification of Human Functional DNA Using a Neutral Indel Model.
- Published in:
- PLoS Computational Biology, 2006, v. 2, n. 1, p. e5, doi. 10.1371/journal.pcbi.0020005
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- Publication type:
- Article
equivariant Bayesian convolutional network predicts recombination hotspots and accurately resolves binding motifs.
- Published in:
- Bioinformatics, 2019, v. 35, n. 13, p. 2177, doi. 10.1093/bioinformatics/bty964
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- Publication type:
- Article
Haplotype matching in large cohorts using the Li and Stephens model.
- Published in:
- Bioinformatics, 2019, v. 35, n. 5, p. 798, doi. 10.1093/bioinformatics/bty735
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- Publication type:
- Article
In-depth assessment of within-individual and inter-individual variation in the B cell receptor repertoire.
- Published in:
- Frontiers in Immunology, 2015, v. 6, p. 1, doi. 10.3389/fimmu.2015.00531
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- Publication type:
- Article
Accurate Reconstruction of Insertion-Deletion Histories by Statistical Phylogenetics.
- Published in:
- PLoS ONE, 2012, v. 7, n. 4, p. 1, doi. 10.1371/journal.pone.0034572
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- Publication type:
- Article
OpEx - a validated, automated pipeline optimised for clinical exome sequence analysis.
- Published in:
- Scientific Reports, 2016, p. 31029, doi. 10.1038/srep31029
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- Publication type:
- Article
Demographic inference from multiple whole genomes using a particle filter for continuous Markov jump processes.
- Published in:
- PLoS ONE, 2021, v. 16, n. 3, p. 1, doi. 10.1371/journal.pone.0247647
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- Publication type:
- Article
A high throughput screen for active human transposable elements.
- Published in:
- BMC Genomics, 2018, v. 19, p. 1, doi. 10.1186/s12864-018-4485-4
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- Publication type:
- Article
Multi Locus View: an extensible web-based tool for the analysis of genomic data.
- Published in:
- Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02097-y
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- Publication type:
- Article
BCR repertoire sequencing: different patterns of B cell activation after two Meningococcal vaccines.
- Published in:
- Immunology & Cell Biology, 2015, v. 93, n. 10, p. 885, doi. 10.1038/icb.2015.57
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- Publication type:
- Article
Short and long-read genome sequencing methodologies for somatic variant detection; genomic analysis of a patient with diffuse large B-cell lymphoma.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-85354-8
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- Publication type:
- Article
B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation.
- Published in:
- Genome Medicine, 2016, v. 8, p. 1, doi. 10.1186/s13073-016-0322-z
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- Publication type:
- Article
CSN and CAVA: variant annotation tools for rapid, robust next-generation sequencing analysis in the clinical setting.
- Published in:
- Genome Medicine, 2015, v. 7, n. 1, p. 1, doi. 10.1186/s13073-015-0195-6
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- Publication type:
- Article
Efficient inference in state-space models through adaptive learning in online Monte Carlo expectation maximization.
- Published in:
- Computational Statistics, 2020, v. 35, n. 3, p. 1319, doi. 10.1007/s00180-019-00937-4
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- Publication type:
- Article
scrm: efficiently simulating long sequences using the approximated coalescent with recombination.
- Published in:
- 2015
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- Publication type:
- Product Review
GAT: a simulation framework for testing the association of genomic intervals.
- Published in:
- Bioinformatics, 2013, v. 29, n. 16, p. 2046, doi. 10.1093/bioinformatics/btt343
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- Publication type:
- Article
The variant call format and VCFtools.
- Published in:
- Bioinformatics, 2011, v. 27, n. 15, p. 2156
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- Publication type:
- Article