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Identifying anaerobic amino acids degraders through the comparison of short‐term and long‐term enrichments.
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- Environmental Microbiology Reports, 2020, v. 12, n. 2, p. 173, doi. 10.1111/1758-2229.12821
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- Article
Co‐occurrence network analysis reveals thermodynamics‐driven microbial interactions in methanogenic bioreactors.
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- Environmental Microbiology Reports, 2018, v. 10, n. 6, p. 673, doi. 10.1111/1758-2229.12689
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- Article
Quantitative multiplexing analysis of PCR-amplified ribosomal RNA genes by hierarchical oligonucleotide primer extension reaction.
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- Nucleic Acids Research, 2007, v. 35, n. 11, p. e82, doi. 10.1093/nar/gkm413
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- Article
Ecology and molecular targets of hypermutation in the global microbiome.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23402-7
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- Article
Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 8, p. 1710, doi. 10.1038/ismej.2014.256
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- Article
Fish gut microbiota analysis differentiates physiology and behavior of invasive Asian carp and indigenous American fish.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 3, p. 541, doi. 10.1038/ismej.2013.181
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- Article
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 1, p. 122, doi. 10.1038/ismej.2010.125
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- Article
Saliva-Based Diagnostics Using 16S rRNA Microarrays and Microfluidics.
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- Annals of the New York Academy of Sciences, 2007, v. 1098, p. 345, doi. 10.1196/annals.1384.007
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- Article
Miniaturized platforms for the detection of single-nucleotide polymorphisms.
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- Analytical & Bioanalytical Chemistry, 2006, v. 386, n. 3, p. 427, doi. 10.1007/s00216-006-0552-9
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- Article
Evaluating digestion efficiency in full-scale anaerobic digesters by identifying active microbial populations through the lens of microbial activity.
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- Scientific Reports, 2016, p. 34090, doi. 10.1038/srep34090
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- Article
Relative Importance of Stochastic Assembly Process of Membrane Biofilm Increased as Biofilm Aged.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.708531
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- Article
Microbial Community Analysis of Anaerobic Reactors Treating Soft Drink Wastewater.
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- PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0119131
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- Article
Analysis of 16S rRNA Amplicon Sequencing Options on the Roche/454 Next-Generation Titanium Sequencing Platform.
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- PLoS ONE, 2011, v. 6, n. 9, p. 1, doi. 10.1371/journal.pone.0025263
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- Article
East Tibetan Lakes Harbour Novel Clusters of Picocyanobacteria as Inferred from the 16S–23S rRNA Internal Transcribed Spacer Sequences.
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- Microbial Ecology, 2010, v. 59, n. 3, p. 614, doi. 10.1007/s00248-009-9603-z
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- Article
Diversity and geochemical community assembly processes of the living rare biosphere in a sand-and-gravel aquifer ecosystem in the Midwestern United States.
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- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-49996-z
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- Article
Novel energy conservation strategies and behaviour of Pelotomaculum schinkii driving syntrophic propionate catabolism.
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- Environmental Microbiology, 2018, v. 20, n. 12, p. 4503, doi. 10.1111/1462-2920.14388
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- Article
Thermodynamically diverse syntrophic aromatic compound catabolism.
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- Environmental Microbiology, 2017, v. 19, n. 11, p. 4576, doi. 10.1111/1462-2920.13922
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- Article
Impact of drinking water treatment and distribution on the microbiome continuum: an ecological disturbance's perspective.
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- Environmental Microbiology, 2017, v. 19, n. 8, p. 3163, doi. 10.1111/1462-2920.13800
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- Article
The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow.
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- Environmental Microbiology, 2015, v. 17, n. 12, p. 4861, doi. 10.1111/1462-2920.12444
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- Article
The nexus of syntrophy-associated microbiota in anaerobic digestion revealed by long-term enrichment and community survey.
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- Environmental Microbiology, 2015, v. 17, n. 5, p. 1707, doi. 10.1111/1462-2920.12616
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- Article
Metagenomic characterization of ' C andidatus Defluviicoccus tetraformis strain TFO71', a tetrad-forming organism, predominant in an anaerobic-aerobic membrane bioreactor with deteriorated biological phosphorus removal.
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- Environmental Microbiology, 2014, v. 16, n. 9, p. 2739, doi. 10.1111/1462-2920.12383
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- Article
H alomonas sulfidaeris-dominated microbial community inhabits a 1.8 km-deep subsurface Cambrian Sandstone reservoir.
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- Environmental Microbiology, 2014, v. 16, n. 6, p. 1695, doi. 10.1111/1462-2920.12325
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Metagenomic analysis of DNA viruses in a wastewater treatment plant in tropical climate.
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- Environmental Microbiology, 2012, v. 14, n. 2, p. 441, doi. 10.1111/j.1462-2920.2011.02630.x
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- Article
Evaluating single-base-pair discriminating capability of planar oligonucleotide microchips using a non-equilibrium dissociation approach.
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- Environmental Microbiology, 2004, v. 6, n. 11, p. 1197, doi. 10.1111/j.1462-2920.2004.00648.x
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Diversity and distribution of a deeply branched novel proteobacterial group found in anaerobic–aerobic activated sludge processes.
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- Environmental Microbiology, 2002, v. 4, n. 11, p. 753, doi. 10.1046/j.1462-2920.2002.00357.x
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- Article
Optimization of an oligonucleotide microchip for microbial identification studies: a non-equilibrium dissociation approach.
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- Environmental Microbiology, 2001, v. 3, n. 10, p. 619, doi. 10.1046/j.1462-2920.2001.00233.x
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- Article
Disentangling the syntrophic electron transfer mechanisms of Candidatus geobacter eutrophica through electrochemical stimulation and machine learning.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-94628-0
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- Article
A Single-Granule-Level Approach Reveals Ecological Heterogeneity in an Upflow Anaerobic Sludge Blanket Reactor.
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- PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0167788
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Insights into the phylogeny and coding potential of microbial dark matter.
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- Nature, 2013, v. 499, n. 7459, p. 431, doi. 10.1038/nature12352
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Effect of divalent ions and a polyphosphate on composition, structure, and stiffness of simulated drinking water biofilms.
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- NPJ Biofilms & Microbiomes, 2018, v. 4, n. 1, p. N.PAG, doi. 10.1038/s41522-018-0058-1
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Ugly ducklings—the dark side of plastic materials in contact with potable water.
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- NPJ Biofilms & Microbiomes, 2018, v. 4, n. 1, p. N.PAG, doi. 10.1038/s41522-018-0050-9
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- Article
Quantifying the contribution of microbial immigration in engineered water systems.
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- Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0760-0
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Coupling growth kinetics modeling with machine learning reveals microbial immigration impacts and identifies key environmental parameters in a biological wastewater treatment process.
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- Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0682-x
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- Article
Ecogenomics-Based Mass Balance Model Reveals the Effects of Fermentation Conditions on Microbial Activity.
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- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.595036
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- Article
Metagenomic and Metatranscriptomic Analyses Revealed Uncultured Bacteroidales Populations as the Dominant Proteolytic Amino Acid Degraders in Anaerobic Digesters.
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- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.593006
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- Article
Diverse Marinimicrobia bacteria may mediate coupled biogeochemical cycles along eco-thermodynamic gradients.
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- Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01376-9
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- Article
Direct treatment of high-strength soft drink wastewater using a down-flow hanging sponge reactor: performance and microbial community dynamics.
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- Applied Microbiology & Biotechnology, 2017, v. 101, n. 14, p. 5925, doi. 10.1007/s00253-017-8326-1
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Global metabolomic responses of Nitrosomonas europaea 19718 to cold stress and altered ammonia feeding patterns.
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- Applied Microbiology & Biotechnology, 2016, v. 100, n. 4, p. 1843, doi. 10.1007/s00253-015-7095-y
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- Article
Effects of hydraulic retention time on aerobic granulation and granule growth kinetics at steady state with a fast start-up strategy.
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- Applied Microbiology & Biotechnology, 2016, v. 100, n. 1, p. 469, doi. 10.1007/s00253-015-6993-3
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Catabolism and interactions of uncultured organisms shaped by eco-thermodynamics in methanogenic bioprocesses.
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- Microbiome, 2020, v. 8, n. 1, p. 1, doi. 10.1186/s40168-020-00885-y
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Machine learning-aided analyses of thousands of draft genomes reveal specific features of activated sludge processes.
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- Microbiome, 2020, v. 8, n. 1, p. 1, doi. 10.1186/s40168-020-0794-3
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- Article
Nexus of Stochastic and Deterministic Processes on Microbial Community Assembly in Biological Systems.
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- Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.01536
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Impact of salinity origin on microbial communities in saline springs within the Illinois Basin, USA.
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- Environmental Microbiology, 2022, v. 24, n. 12, p. 6112, doi. 10.1111/1462-2920.16241
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Immune-modulatory genomic properties differentiate gut microbiota of infants with and without eczema.
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- PLoS ONE, 2017, v. 12, n. 10, p. 1, doi. 10.1371/journal.pone.0184955
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- Article