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Interactions between microbial diversity and substrate chemistry determine the fate of carbon in soil.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-97942-9
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- Article
Predicting Species-Resolved Macronutrient Acquisition during Succession in a Model Phototrophic Biofilm Using an Integrated 'Omics Approach.
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- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01020
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- Article
The fungus gardens of leaf-cutter ants undergo a distinct physiological transition during biomass degradation.
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- Environmental Microbiology Reports, 2014, v. 6, n. 4, p. 389, doi. 10.1111/1758-2229.12163
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- Article
Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6358-x
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- Article
Measurements of I/SVOCs in biomass-burning smoke using solid-phase extraction disks and two-dimensional gas chromatography.
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- Atmospheric Chemistry & Physics, 2018, v. 18, n. 24, p. 17801, doi. 10.5194/acp-18-17801-2018
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- Article
Automated immobilized metal affinity chromatography system for enrichment of Escherichia coli phosphoproteome.
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- Electrophoresis, 2013, v. 34, n. 11, p. 1619, doi. 10.1002/elps.201200628
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- Article
Using size exclusion chromatography-RPLC and RPLC-CIEF as two-dimensional separation strategies for protein profiling.
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- Electrophoresis, 2006, v. 27, n. 13, p. 2722, doi. 10.1002/elps.200600037
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- Article
Evaluation of two-dimensional electrophoresis and liquid chromatography – tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.
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- Electrophoresis, 2005, v. 26, n. 17, p. 3406, doi. 10.1002/elps.200590055
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- Article
Evaluation of two-dimensional electrophoresis and liquid chromatography – tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.
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- Electrophoresis, 2005, v. 26, n. 14, p. 2729, doi. 10.1002/elps.200410399
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- Article
Comparison of Chloroflexus aurantiacus strain J-10-fl proteomes of cells grown chemoheterotrophically and photoheterotrophically.
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- Photosynthesis Research, 2012, v. 110, n. 3, p. 153, doi. 10.1007/s11120-011-9711-8
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- Article
Decrypting bacterial polyphenol metabolism in an anoxic wetland soil.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22765-1
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- Article
Development of a biomarker for Geobacter activity and strain composition; Proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI).
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- Microbial Biotechnology, 2011, v. 4, n. 1, p. 55, doi. 10.1111/j.1751-7915.2010.00194.x
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- Article
Metabolic interdependencies between phylogenetically novel fermenters and respiratory organisms in an unconfined aquifer.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 7, p. 1452, doi. 10.1038/ismej.2013.249
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- Article
Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 9, p. 1688, doi. 10.1038/ismej.2012.10
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- Article
Proteome insights into the symbiotic relationship between a captive colony of Nasutitermes corniger and its hindgut microbiome.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 1, p. 161, doi. 10.1038/ismej.2010.97
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- Article
Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 1, p. 93, doi. 10.1038/ismej.2008.83
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- Article
Analysis of radiation induced nucleobase-peptide crosslinks by electrospray ionization mass spectrometry.
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- Rapid Communications in Mass Spectrometry: RCM, 1997, v. 11, n. 15, p. 1673, doi. 10.1002/(SICI)1097-0231(19971015)11:15<1673::AID-RCM38>3.0.CO;2-Q
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- Article
Hi-C metagenome sequencing reveals soil phage–host interactions.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-42967-z
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- Article
Single-cell isotope tracing reveals functional guilds of bacteria associated with the diatom Phaeodactylum tricornutum.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41179-9
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- Article
Evaluating Models of Cellulose Degradation by Fibrobacter succinogenes S85.
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- PLoS ONE, 2015, v. 10, n. 12, p. 1, doi. 10.1371/journal.pone.0143809
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- Article
Correction: Enrichment and Broad Representation of Plant Biomass-Degrading Enzymes in the Specialized Hyphal Swellings of Leucoagaricus gongylophorus, the Fungal Symbiont of Leaf-Cutter Ants.
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- PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0139151
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- Article
Enrichment and Broad Representation of Plant Biomass-Degrading Enzymes in the Specialized Hyphal Swellings of Leucoagaricus gongylophorus, the Fungal Symbiont of Leaf-Cutter Ants.
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- PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0134752
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- Article
Fluctuations in Species-Level Protein Expression Occur during Element and Nutrient Cycling in the Subsurface.
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- PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0057819
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- Article
Regulatory Response to Carbon Starvation in Caulobacter crescentus.
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- PLoS ONE, 2011, v. 6, n. 4, p. 1, doi. 10.1371/journal.pone.0018179
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- Article
Genome Sequence of the Deltaproteobacterial Strain NaphS2 and Analysis of Differential Gene Expression during Anaerobic Growth on Naphthalene.
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- PLoS ONE, 2010, v. 5, n. 11, p. 1, doi. 10.1371/journal.pone.0014072
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- Article
An Empirical Strategy for Characterizing Bacterial Proteomes across Species in the Absence of Genomic Sequences.
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- PLoS ONE, 2010, v. 5, n. 11, p. 1, doi. 10.1371/journal.pone.0013968
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- Article
Establishing the Proteome of Normal Human Cerebrospinal Fluid.
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- PLoS ONE, 2010, v. 5, n. 6, p. 1, doi. 10.1371/journal.pone.0010980
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- Article
Transcriptional and Translational Regulatory Responses to Iron Limitation in the Globally Distributed Marine Bacterium Candidatus Pelagibacter ubique.
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- PLoS ONE, 2010, v. 5, n. 5, p. 1, doi. 10.1371/journal.pone.0010487
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- Article
Proteomic Detection of Non-Annotated Protein-Coding Genes in Pseudomonas fluorescens Pf0-1.
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- PLoS ONE, 2009, v. 4, n. 12, p. 1, doi. 10.1371/journal.pone.0008455
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- Article
Comparative Bacterial Proteomics: Analysis of the Core Genome Concept.
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- PLoS ONE, 2008, v. 3, n. 2, p. 1, doi. 10.1371/journal.pone.0001542
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- Article
Gene expression profiling using advanced mass spectrometric approaches.
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- 2002
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- Other
Amino acid treatment enhances protein recovery from sediment and soils for metaproteomic studies.
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- Proteomics, 2013, v. 13, n. 18/19, p. 2776, doi. 10.1002/pmic.201300003
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- Article
Impact of Arc A loss in Shewanella oneidensis revealed by comparative proteomics under aerobic and anaerobic conditions.
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- Proteomics, 2012, v. 12, n. 12, p. 1957, doi. 10.1002/pmic.201100651
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- Article
Global detection and characterization of hypothetical proteins in Shewanella oneidensis MR-1 using LC-MS based proteomics.
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- Proteomics, 2005, v. 5, n. 12, p. 3120, doi. 10.1002/pmic.200401140
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- Article
An accurate mass tag strategy for quantitative and high-throughput proteome measurements.
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- Proteomics, 2002, v. 2, n. 5, p. 513, doi. 10.1002/1615-9861(200205)2:5<513::AID-PROT513>3.0.CO;2-W
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- Article
New Insights Into Lignification via Network and Multi-Omics Analyses of Arogenate Dehydratase Knock-Out Mutants in Arabidopsis thaliana.
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- Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.664250
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- Article
Daylight-driven carbon exchange through a vertically structured microbial community.
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- Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1139213
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- Article
Evaluation of enzymatic digestion and liquid chromatography-mass spectrometry peptide mapping of the integral membrane protein bacteriorhodopsin.
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- Electrophoresis, 2002, v. 23, n. 18, p. 3224, doi. 10.1002/1522-2683(200209)23:18<3224::AID-ELPS3224>3.0.CO;2-#
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- Article
Rapid quantitative measurements of proteomes by Fourier transform ion cyclotron resonance mass spectrometry.
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- Electrophoresis, 2001, v. 22, n. 9, p. 1652, doi. 10.1002/1522-2683(200105)22:9<1652::AID-ELPS1652>3.0.CO;2-E
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- Article
Mass spectrometic detection for capillary isoelectric focusing separations of complex protein mixtures.
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- Electrophoresis, 2000, v. 21, n. 7, p. 1372, doi. 10.1002/(SICI)1522-2683(20000401)21:7<1372::AID-ELPS1372>3.0.CO;2-Y
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- Publication type:
- Article
Real-Time and Rapid Respiratory Response of the Soil Microbiome to Moisture Shifts.
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- Microorganisms, 2023, v. 11, n. 11, p. 2630, doi. 10.3390/microorganisms11112630
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- Publication type:
- Article
Genome-Scale Modeling of Light-Driven Reductant Partitioning and Carbon Fluxes in Diazotrophic Unicellular Cyanobacterium Cyanothece sp. ATCC 51142.
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- PLoS Computational Biology, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pcbi.1002460
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- Article
Proteogenomics: needs and roles to be filled by proteomics in genome annotation.
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- Briefings in Functional Genomics & Proteomics, 2008, v. 7, n. 1, p. 50, doi. 10.1093/bfgp/eln010
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- Article
Rapid remodeling of the soil lipidome in response to a drying-rewetting event.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-022-01427-4
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- Article
Ultra-sensitive isotope probing to quantify activity and substrate assimilation in microbiomes.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-022-01454-1
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- Article
Defects in the Expression of Chloroplast Proteins Leads to H<sub>2</sub>O<sub>2</sub> Accumulation and Activation of Cyclic Electron Flow around Photosystem I.
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- Frontiers in Plant Science, 2017, v. 7, p. 1, doi. 10.3389/fpls.2016.02073
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- Article
Colonies of the fungus Aspergillus niger are highly differentiated to adapt to local carbon source variation.
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- Environmental Microbiology, 2020, v. 22, n. 3, p. 1154, doi. 10.1111/1462-2920.14907
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- Article
Extracellular polymeric substances from Shewanella sp. HRCR-1 biofilms: characterization by infrared spectroscopy and proteomics.
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- Environmental Microbiology, 2011, v. 13, n. 4, p. 1018, doi. 10.1111/j.1462-2920.2010.02407.x
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- Publication type:
- Article
Top-Down Characterization of the Post-Translationally Modified Intact Periplasmic Proteome from the Bacterium Novosphingobium aromaticivorans.
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- International Journal of Proteomics, 2013, p. 1, doi. 10.1155/2013/279590
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- Article
Zn deficiency disrupts Cu and S homeostasis in Chlamydomonas resulting in over accumulation of Cu and Cysteine.
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- Metallomics, 2023, v. 15, n. 7, p. 1, doi. 10.1093/mtomcs/mfad043
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- Article