Found: 55

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  • A global initiative on sharing avian flu data.

    Published in:
    2006
    By:
    • Bogner, Peter;
    • Capua, Ilaria;
    • Cox, Nancy J.;
    • Lipman, David J.
    Publication type:
    Letter

  • Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution.

    Published in:
    Nature, 2005, v. 437, n. 7062, p. 1162, doi. 10.1038/nature04239
    By:
    • Ghedin, Elodie;
    • Sengamalay, Naomi A.;
    • Shumway, Martin;
    • Zaborsky, Jennifer;
    • Feldblyum, Tamara;
    • Subbu, Vik;
    • Spiro, David J.;
    • Sitz, Jeff;
    • Koo, Hean;
    • Bolotov, Pavel;
    • Dernovoy, Dmitry;
    • Tatusova, Tatiana;
    • Yiming Bao;
    • St George, Kirsten;
    • Taylor, Jill;
    • Lipman, David J.;
    • Fraser, Claire M.;
    • Taubenberger, Jeffery K.;
    • Salzberg, Steven L.
    Publication type:
    Article

  • Why Does a Protein’s Evolutionary Rate Vary over Time?

    Published in:
    Genome Biology & Evolution, 2013, v. 5, n. 3, p. 494, doi. 10.1093/gbe/evt024
    By:
    • Du, Xiangjun;
    • Lipman, David J.;
    • Cherry, Joshua L.
    Publication type:
    Article

  • Extracting protein alignment models from the sequence database.

    Published in:
    Nucleic Acids Research, 1997, v. 25, n. 9, p. 1665, doi. 10.1093/nar/25.9.1665
    By:
    • Neuwald, Andrew F.;
    • Liu, Jun S.;
    • Lipman, David J.;
    • Lawrence, Charles E.
    Publication type:
    Article

  • Extracting protein alignment models from the sequence database.

    Published in:
    Nucleic Acids Research, 1997, v. 25, n. 2, p. 1665, doi. 10.1093/nar/25.9.1665
    By:
    • Neuwald, Andrew F.;
    • Liu, Jun S.;
    • Lipman, David J.;
    • Lawrence, Charles E.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 1997, v. 25, n. 1, p. 1, doi. 10.1093/nar/25.1.1
    By:
    • Benson, Dennis A.;
    • Boguski, Mark S.;
    • Lipman, David J.;
    • Ostell, James
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 1996, v. 24, n. 1, p. 1, doi. 10.1093/nar/24.1.1
    By:
    • Benson, Dennis A.;
    • Boguski, Mark;
    • Lipman, David J.;
    • Ostell, James
    Publication type:
    Article

  • Towards PubMed 2.0.

    Published in:
    eLife, 2017, p. 1, doi. 10.7554/eLife.28801
    By:
    • FIORINI, NICOLAS;
    • LIPMAN, DAVID J.;
    • ZHIYONG LU
    Publication type:
    Article

  • Association between pre-exercise food ingestion timing and reactive hypoglycemia: Insights from a large database of continuous glucose monitoring data.

    Published in:
    European Journal of Sport Science, 2023, v. 23, n. 12, p. 2340, doi. 10.1080/17461391.2023.2233468
    By:
    • Zignoli, Andrea;
    • Fontana, Federico Y.;
    • Lipman, David J.;
    • Skroce, Kristina;
    • Maturana, Felipe M.;
    • Zisser, Howard C.
    Publication type:
    Article

  • SKESA: strategic k-mer extension for scrupulous assemblies.

    Published in:
    Genome Biology, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1540-z
    By:
    • Souvorov, Alexandre;
    • Agarwala, Richa;
    • Lipman, David J.
    Publication type:
    Article

  • Complex Patterns of Human Antisera Reactivity to Novel 2009 H1N1 and Historical H1N1 Influenza Strains.

    Published in:
    PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0039435
    By:
    • Carter, Donald M.;
    • Hai-Rong Lu;
    • Bloom, Chalise E.;
    • Crevar, Corey J.;
    • Cherry, Joshua L.;
    • Lipman, David J.;
    • Ross, Ted M.
    Publication type:
    Article

  • Biology direct: celebrating 7 years of open, published peer review.

    Published in:
    2013
    By:
    • Koonin, Eugene V.;
    • Landweber, Laura F.;
    • Lipman, David J.
    Publication type:
    Editorial

  • Domain enhanced lookup time accelerated BLAST.

    Published in:
    Biology Direct, 2012, v. 7, n. 1, p. 12, doi. 10.1186/1745-6150-7-12
    By:
    • Boratyn, Grzegorz M.;
    • Sch„ffer, Alejandro A.;
    • Agarwala, Richa;
    • Altschul, Stephen F.;
    • Lipman, David J.;
    • Madden, Thomas L.
    Publication type:
    Article

  • Long intervals of stasis punctuated by bursts of positive selection in the seasonal evolution of influenza A virus.

    Published in:
    Biology Direct, 2006, v. 1, p. 34, doi. 10.1186/1745-6150-1-34
    By:
    • Wolf, Yuri I.;
    • Viboud, Cecile;
    • Holmes, Edward C.;
    • Koonin, Eugene V.;
    • Lipman, David J.
    Publication type:
    Article

  • A community experiment with fully open and published peer review.

    Published in:
    2006
    By:
    • Koonin, Eugene V.;
    • Landweber, Laura F.;
    • Lipman, David J.
    Publication type:
    Editorial

  • Whole-Genome Analysis of Human Influenza A Virus Reveals Multiple Persistent Lineages and Reassortment among Recent H3N2 Viruses.

    Published in:
    PLoS Biology, 2005, v. 3, n. 9, p. 1579, doi. 10.1371/journal.pbio.0030300
    By:
    • Holmes, Edward C.;
    • Ghedin, Elodie;
    • Miller, Naomi;
    • Taylor, Jill;
    • Yiming Bao;
    • St. George, Kirsten;
    • Grenfell, Bryan T.;
    • Salzberg, Steven L.;
    • Fraser, Claire M.;
    • Lipman, David J.;
    • Taubenberger, Jeffery K.
    Publication type:
    Article

  • Whole-Genome Analysis of Human Influenza A Virus Reveals Multiple Persistent Lineages and Reassortment among Recent H3N2 Viruses.

    Published in:
    PLoS Biology, 2005, v. 3, n. 7, p. 1, doi. 10.1371/journal.pbio.0030300
    By:
    • Holmes, Edward C;
    • Ghedin, Elodie;
    • Miller, Naomi;
    • Taylor, Jill;
    • Bao, Yiming;
    • St George, Kirsten;
    • Grenfell, Bryan T;
    • Salzberg, Steven L;
    • Fraser, Claire M;
    • Lipman, David J;
    • Taubenberger, Jeffery K
    Publication type:
    Article

  • NIH funding: Agency rebuts critique.

    Published in:
    Nature, 2013, v. 493, n. 7430, p. 26, doi. 10.1038/493026a
    By:
    • Santangelo, George;
    • Lipman, David J.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2017, v. 45, n. D1, p. D37, doi. 10.1093/nar/gkw1070
    By:
    • Benson, Dennis A.;
    • Cavanaugh, Mark;
    • Clark, Karen;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Sayers, Eric W.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2016, v. 44, n. 1, p. D67, doi. 10.1093/nar/gkv1276
    By:
    • Clark, Karen;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Sayers, Eric W.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2015, v. 43, n. D1, p. D30, doi. 10.1093/nar/gku1216
    By:
    • Benson, Dennis A.;
    • Clark, Karen;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Sayers, Eric W.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2014, v. 42, n. D1, p. D32, doi. 10.1093/nar/gkt1030
    By:
    • Benson, Dennis A.;
    • Clark, Karen;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Sayers, Eric W.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2012, p. D48, doi. 10.1093/nar/gkr1202
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Clark, Karen;
    • Lipman, David J.;
    • Ostell, James;
    • Sayers, Eric W.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2012, p. D13, doi. 10.1093/nar/gkr1184
    By:
    • Sayers, Eric W.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bolton, Evan;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Federhen, Scott;
    • Feolo, Michael;
    • Fingerman, Ian M.;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Krasnov, Sergey;
    • Landsman, David;
    • Lipman, David J.;
    • Lu, Zhiyong;
    • Madden, Thomas L.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D38, doi. 10.1093/nar/gkq1172
    By:
    • Sayers, Eric W.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bolton, Evan;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Federhen, Scott;
    • Feolo, Michael;
    • Fingerman, Ian M.;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Landsman, David;
    • Lipman, David J.;
    • Lu, Zhiyong;
    • Madden, Thomas L.;
    • Madej, Tom
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D32, doi. 10.1093/nar/gkq1079
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Sayers, Eric W.
    Publication type:
    Article

  • A workbench for multiple alignment construction and analysis.

    Published in:
    Proteins, 1991, v. 9, n. 3, p. 180, doi. 10.1002/prot.340090304
    By:
    • Schuler, Gregory D.;
    • Altschul, Stephen F.;
    • Lipman, David J.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2010, v. 38, p. D46, doi. 10.1093/nar/gkp1024
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Sayers, Eric W.
    Publication type:
    Article

  • Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage.

    Published in:
    Nucleic Acids Research, 2009, v. 37, n. 20, p. 6799, doi. 10.1093/nar/gkp712
    By:
    • Huang, Yang;
    • Koonin, Eugene V.;
    • Lipman, David J.;
    • Przytycka, Teresa M.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2009, v. 37, n. 9, p. 3124, doi. 10.1093/nar/gkp382
    By:
    • Sayers, Eric W.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Feolo, Michael;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Landsman, David;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Miller, Vadim;
    • Mizrachi, Ilene
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D5, doi. 10.1093/nar/gkn741
    By:
    • Sayers, Eric W.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Feolo, Michael;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Landsman, David;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Miller, Vadim;
    • Mizrachi, Ilene
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D26, doi. 10.1093/nar/gkn723
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Sayers, Eric W.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2008, v. 36, p. D13
    By:
    • Wheeler, David L.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Feolo, Michael;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Khovayko, Oleg;
    • Landsman, David;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Miller, Vadim
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2008, v. 36, p. D25
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Wheeler, David L.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2007, v. 35, p. d21, doi. 10.1093/nar/gkl986
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Wheeler, David L.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2007, v. 35, p. d5, doi. 10.1093/nar/gkl1031
    By:
    • Wheeler, David L.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Geer, Lewis Y.;
    • Kapustin, Yuri;
    • Khovayko, Oleg;
    • Landsman, David;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Ostell, James;
    • Miller, Vadim;
    • Pruitt, Kim D.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d16, doi. 10.1093/nar/gkj157
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Wheeler, David L.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d173, doi. 10.1093/nar/gkj158
    By:
    • Wheeler, David L.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Chetvernin, Vyacheslav;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Geer, Lewis Y.;
    • Helmberg, Wolfgang;
    • Kapustin, Yuri;
    • Kenton, David L.;
    • Khovayko, Oleg;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Ostell, James;
    • Pruitt, Kim D.
    Publication type:
    Article

  • Database resources of the National Center for Biotechnology Information.

    Published in:
    Nucleic Acids Research, 2005, v. 33, n. suppl 1, p. d39
    By:
    • Wheeler, David L.;
    • Barrett, Tanya;
    • Benson, Dennis A.;
    • Bryant, Stephen H.;
    • Canese, Kathi;
    • Church, Deanna M.;
    • DiCuccio, Michael;
    • Edgar, Ron;
    • Federhen, Scott;
    • Helmberg, Wolfgang;
    • Kenton, David L.;
    • Khovayko, Oleg;
    • Lipman, David J.;
    • Madden, Thomas L.;
    • Maglott, Donna R.;
    • Ostell, James;
    • Pontius, Joan U.;
    • Pruitt, Kim D.;
    • Schuler, Gregory D.;
    • Schriml, Lynn M.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2005, v. 33, n. suppl 1, p. d34
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Wheeler, David L.
    Publication type:
    Article

  • Comparative analysis of orthologous eukaryotic mRNAs: potential hidden functional signals.

    Published in:
    Nucleic Acids Research, 2004, v. 32, n. 5, p. 1774, doi. 10.1093/nar/gkh313
    By:
    • Shabalina, Svetlana A.;
    • Ogurtsov, Aleksey Y.;
    • Rogozin, Igor B.;
    • Koonin, Eugene V.;
    • Lipman, David J.
    Publication type:
    Article

  • GenBank: update.

    Published in:
    Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d23
    By:
    • Benson, Dennis A.;
    • Karsch‐Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Wheeler, David L.
    Publication type:
    Article

  • Patterns in interspecies similarity correlate with nucleotide composition in mammalian 3′UTRs.

    Published in:
    Nucleic Acids Research, 2003, v. 31, n. 18, p. 5433, doi. 10.1093/nar/gkg751
    By:
    • Shabalina, Svetlana A.;
    • Ogurtsov, Aleksey Y.;
    • Lipman, David J.;
    • Kondrashov, Alexey S.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2003, v. 31, n. 1, p. 23, doi. 10.1093/nar/gkg057
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Wheeler, David L.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2002, v. 30, n. 1, p. 17, doi. 10.1093/nar/30.1.17
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Rapp, Barbara A.;
    • Wheeler, David L.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 2000, v. 28, n. 1, p. 15, doi. 10.1093/nar/28.1.15
    By:
    • Benson, Dennis A.;
    • Karsch-Mizrachi, Ilene;
    • Lipman, David J.;
    • Ostell, James;
    • Rapp, Barbara A.;
    • Wheeler, David L.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 1999, v. 27, n. 1, p. 12, doi. 10.1093/nar/27.1.12
    By:
    • Benson, Dennis A.;
    • Boguski, Mark S.;
    • Lipman, David J.;
    • Ostell, James;
    • Ouellette, B. F. Francis;
    • Rapp, Barbara A.;
    • Wheeler, David L.
    Publication type:
    Article

  • Protein sequence similarity searches using patterns as seeds.

    Published in:
    Nucleic Acids Research, 1998, v. 26, n. 17, p. 3986, doi. 10.1093/nar/26.17.3986
    By:
    • Zhang, Zheng;
    • Schäffer, Alejandro A.;
    • Miller, Webb;
    • Madden, Thomas L.;
    • Lipman, David J.;
    • Koonin, Eugene V.;
    • Altschul, Stephen F.
    Publication type:
    Article

  • GenBank.

    Published in:
    Nucleic Acids Research, 1998, v. 26, n. 1, p. 1, doi. 10.1093/nar/26.1.1
    By:
    • Benson, Dennis A.;
    • Boguski, Mark S.;
    • Lipman, David J.;
    • Ostell, James;
    • Ouellette, B. F. Francis
    Publication type:
    Article

  • Differences in evolutionary pressure acting within highly conserved ortholog groups.

    Published in:
    BMC Evolutionary Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2148-8-208
    By:
    • Przytycka, Teresa M.;
    • Jothi, Raja;
    • Aravind, L.;
    • Lipman, David J.
    Publication type:
    Article