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Polyelectrolyte-Clay-Protein Layer Films on Microfluidic PDMS Bioreactor Surfaces for Primary Murine Bone Marrow Culture.
- Published in:
- Advanced Functional Materials, 2007, v. 17, n. 15, p. 2701, doi. 10.1002/adfm.200700016
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- Publication type:
- Article
Mathematical and computational approaches can complement experimental studies of host–pathogen interactions.
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- Cellular Microbiology, 2009, v. 11, n. 4, p. 531, doi. 10.1111/j.1462-5822.2009.01281.x
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- Publication type:
- Article
Co-optimization of therapeutic antibody affinity and specificity using machine learning models that generalize to novel mutational space.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31457-3
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- Publication type:
- Article
A POPULATION MODEL CAPTURING DYNAMICS OF TUBERCULOSIS GRANULOMAS PREDICTS HOST INFECTION OUTCOMES.
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- Mathematical Biosciences & Engineering, 2015, v. 12, n. 3, p. 625, doi. 10.3934/mbe.2015.12.625
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- Publication type:
- Article
In silico evaluation and exploration of antibiotic tuberculosis treatment regimens.
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- BMC Systems Biology, 2015, v. 9, p. 1, doi. 10.1186/s12918-015-0221-8
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- Publication type:
- Article
Electrodeless direct current dielectrophoresis using reconfigurable field-shaping oil barriers.
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- Electrophoresis, 2007, v. 28, n. 24, p. 4572, doi. 10.1002/elps.200700373
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- Publication type:
- Article
Concomitant immunity to M. tuberculosis infection.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-24516-8
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- Publication type:
- Article
Corrigendum: Spatial Organization and Recruitment of Non-Specific T Cells May Limit T Cell-Macrophage Interactions Within Mycobacterium tuberculosis Granulomas.
- Published in:
- 2021
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- Correction Notice
NF-κB signaling dynamics play a key role in infection control in tuberculosis.
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- Frontiers in Physiology, 2012, v. 3, p. 1, doi. 10.3389/fphys.2012.00170
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- Publication type:
- Article
NF-κB signaling dynamics play a key role in infection control in tuberculosis.
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- Frontiers in Physiology, 2012, v. 3, p. 1, doi. 10.3389/fphys.2012.00170
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- Publication type:
- Article
CaliPro: A Calibration Protocol That Utilizes Parameter Density Estimation to Explore Parameter Space and Calibrate Complex Biological Models.
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- Cellular & Molecular Bioengineering, 2021, v. 14, n. 1, p. 31, doi. 10.1007/s12195-020-00650-z
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- Publication type:
- Article
Pre-existing Cell States Control Heterogeneity of Both EGFR and CXCR4 Signaling.
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- Cellular & Molecular Bioengineering, 2021, v. 14, n. 1, p. 49, doi. 10.1007/s12195-020-00640-1
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- Publication type:
- Article
Short-term cellular memory tunes the signaling responses of the chemokine receptor CXCR4.
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- Science Signaling, 2019, v. 12, n. 589, p. 1, doi. 10.1126/scisignal.aaw4204
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- Publication type:
- Article
Optimizing Solid Tumor Treatment with Antibody–drug Conjugates Using Agent-Based Modeling: Considering the Role of a Carrier Dose and Payload Class.
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- Pharmaceutical Research, 2024, v. 41, n. 6, p. 1109, doi. 10.1007/s11095-024-03715-0
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- Publication type:
- Article
Mild cold exposure modulates fibroblast growth factor 21 (FGF21) diurnal rhythm in humans: relationship between FGF21 levels, lipolysis, and cold-induced thermogenesis.
- Published in:
- 2013
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- Publication type:
- journal article
Model-based analysis and design of a microchannel reactor for tissue engineering.
- Published in:
- Biotechnology & Bioengineering, 2006, v. 94, n. 3, p. 596, doi. 10.1002/bit.20857
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- Publication type:
- Article
Deletion of TgF-β1 increases Bacterial clearance by cytotoxic T cells in a Tuberculosis granuloma Model.
- Published in:
- Frontiers in Immunology, 2017, p. 1, doi. 10.3389/fimmu.2017.01843
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- Publication type:
- Article
Pharmacokinetics and Pharmacodynamics of TAK-164 Antibody Drug Conjugate Coadministered with Unconjugated Antibody.
- Published in:
- AAPS Journal, 2022, v. 24, n. 6, p. 1, doi. 10.1208/s12248-022-00756-4
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- Publication type:
- Article
An Agent-Based Systems Pharmacology Model of the Antibody-Drug Conjugate Kadcyla to Predict Efficacy of Different Dosing Regimens.
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- AAPS Journal, 2020, v. 22, n. 2, p. 1, doi. 10.1208/s12248-019-0391-1
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- Publication type:
- Article
Cell, Isoform, and Environment Factors Shape Gradients and Modulate Chemotaxis.
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- PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0123450
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- Publication type:
- Article
CXCR7 Controls Competition for Recruitment of β-Arrestin 2 in Cells Expressing Both CXCR4 and CXCR7.
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- PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0098328
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- Publication type:
- Article
Multi-Scale Modeling Predicts a Balance of Tumor Necrosis Factor-α and Interleukin-10 Controls the Granuloma Environment during <i>Mycobacterium tuberculosis</i> Infection.
- Published in:
- PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0068680
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- Publication type:
- Article
Lipid Raft-Mediated Regulation of G-Protein Coupled Receptor Signaling by Ligands which Influence Receptor Dimerization: A Computational Study.
- Published in:
- PLoS ONE, 2009, v. 4, n. 8, p. 1, doi. 10.1371/journal.pone.0006604
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- Publication type:
- Article
Letter to the Editor
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- Software: Practice & Experience, 1998, v. 28, n. 1, p. 121
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- Publication type:
- Article
Monocytes Recruited to the Lungs of Mice During Immune Inflammation Ingest Apoptotic Cells Poorly.
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- American Journal of Respiratory Cell & Molecular Biology, 2005, v. 32, n. 2, p. 108, doi. 10.1165/rcmb.2004-0108OC
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- Publication type:
- Article
A computational approach to inferring cellular protein-binding affinities from quantitative fluorescence resonance energy transfer imaging.
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- Proteomics, 2009, v. 9, n. 23, p. 5371, doi. 10.1002/pmic.200800494
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- Publication type:
- Article
Simple transporter trafficking model for amphetamine-induced dopamine efflux.
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- Synapse, 2007, v. 61, n. 7, p. 500, doi. 10.1002/syn.20390
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- Publication type:
- Article
Dynamic balance of pro‐ and anti‐inflammatory signals controls disease and limits pathology.
- Published in:
- Immunological Reviews, 2018, v. 285, n. 1, p. 147, doi. 10.1111/imr.12671
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- Publication type:
- Article
Toward a multiscale model of antigen presentation in immunity.
- Published in:
- Immunological Reviews, 2007, v. 216, n. 1, p. 93, doi. 10.1111/j.1600-065X.2007.00490.x
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- Publication type:
- Article
Calcium Signaling in Individual BC<sup>3</sup>H1 Cells: Speed of Calcium Mobilization and Heterogeneity.
- Published in:
- Biotechnology Progress, 1994, v. 10, n. 1, p. 45, doi. 10.1021/bp00025a005
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- Publication type:
- Article
Affinity Chromatography for Cell Separation: Mathematical Model and Experimental Analysis.
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- Biotechnology Progress, 1987, v. 3, n. 3, p. 189, doi. 10.1002/btpr.5420030310
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- Publication type:
- Article
Phase-Locked Signals Elucidate Circuit Architecture of an Oscillatory Pathway.
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- PLoS Computational Biology, 2010, v. 6, n. 12, p. 1, doi. 10.1371/journal.pcbi.1001040
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- Publication type:
- Article
Identification of Key Processes that Control Tumor Necrosis Factor Availability in a Tuberculosis Granuloma.
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- PLoS Computational Biology, 2010, v. 6, n. 5, p. 1, doi. 10.1371/journal.pcbi.1000778
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- Publication type:
- Article
Both Ligand- and Cell-Specific Parameters Control Ligand Agonism in a Kinetic Model of G Protein--Coupled Receptor Signaling.
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- PLoS Computational Biology, 2007, v. 3, n. 1, p. 84, doi. 10.1371/journal.pcbi.0030006
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- Publication type:
- Article
Computational Modeling Predicts Simultaneous Targeting of Fibroblasts and Epithelial Cells Is Necessary for Treatment of Pulmonary Fibrosis.
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- Frontiers in Pharmacology, 2016, p. 1, doi. 10.3389/fphar.2016.00183
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- Publication type:
- Article
Neutrophil Dynamics Affect Mycobacterium tuberculosis Granuloma Outcomes and Dissemination.
- Published in:
- Frontiers in Immunology, 2021, v. 12, p. 1, doi. 10.3389/fimmu.2021.712457
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- Publication type:
- Article
Spatial Organization and Recruitment of Non-Specific T Cells May Limit T Cell-Macrophage Interactions Within Mycobacterium tuberculosis Granulomas.
- Published in:
- Frontiers in Immunology, 2021, v. 11, p. N.PAG, doi. 10.3389/fimmu.2020.613638
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- Publication type:
- Article
A novel geminal diol as a highly specific and stable in vivo inhibitor of insect juvenile hormone esterase.
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- Archives of Insect Biochemistry & Physiology, 1997, v. 36, n. 3, p. 165, doi. 10.1002/(SICI)1520-6327(1997)36:3<165::AID-ARCH2>3.0.CO;2-T
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- Publication type:
- Article
Mechanism of action and cloning of epoxide hydrolase from the cabbage looper, Trichoplusia ni.
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- Archives of Insect Biochemistry & Physiology, 1996, v. 32, n. 3/4, p. 527, doi. 10.1002/(SICI)1520-6327(1996)32:3/4<527::AID-ARCH24>3.0.CO;2-D
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- Publication type:
- Article
Lymphocytic Alveolitis Is Associated with the Accumulation of Functionally Impaired HIV-Specific T Cells in the Lung of Antiretroviral Therapy-Naive Subjects.
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- American Journal of Respiratory & Critical Care Medicine, 2015, v. 191, n. 4, p. 464, doi. 10.1164/rccm.201408-1521OC
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- Publication type:
- Article
Widespread colonization of the lung by Tropheryma whipplei in HIV infection.
- Published in:
- 2013
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- Publication type:
- journal article
Widespread Colonization of the Lung by Tropheryma whipplei in HIV Infection.
- Published in:
- American Journal of Respiratory & Critical Care Medicine, 2013, v. 187, n. 10, p. 1110, doi. 10.1164/rccm.201211-2145oc
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- Publication type:
- Article
Cigarette smoke impairs clearance of apoptotic cells through oxidant-dependent activation of RhoA.
- Published in:
- 2009
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- Publication type:
- journal article
Surfactant proteins A and D suppress alveolar macrophage phagocytosis via interaction with SIRP alpha.
- Published in:
- 2008
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- Publication type:
- journal article
A computational model tracks whole-lung Mycobacterium tuberculosis infection and predicts factors that inhibit dissemination.
- Published in:
- PLoS Computational Biology, 2020, v. 16, n. 5, p. 1, doi. 10.1371/journal.pcbi.1007280
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- Publication type:
- Article
The Role of Dimensionality in Understanding Granuloma Formation.
- Published in:
- Computation, 2018, v. 6, n. 4, p. 58, doi. 10.3390/computation6040058
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- Publication type:
- Article
A multi-scale pipeline linking drug transcriptomics with pharmacokinetics predicts in vivo interactions of tuberculosis drugs.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-84827-0
- By:
- Publication type:
- Article
Integrating Non-human Primate, Human, and Mathematical Studies to Determine the Influence of BCG Timing on H56 Vaccine Outcomes.
- Published in:
- Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.01734
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- Publication type:
- Article
Optimizing tuberculosis treatment efficacy: Comparing the standard regimen with Moxifloxacin-containing regimens.
- Published in:
- PLoS Computational Biology, 2023, v. 19, n. 6, p. 1, doi. 10.1371/journal.pcbi.1010823
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- Publication type:
- Article
Computational and Empirical Studies Predict Mycobacterium tuberculosis-Specific T Cells as a Biomarker for Infection Outcome.
- Published in:
- PLoS Computational Biology, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pcbi.1004804
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- Publication type:
- Article