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DNA microarray normalization methods can remove bias from differential protein expression analysis of 2D difference gel electrophoresis results.
- Published in:
- Bioinformatics, 2004, v. 20, n. 13, p. 2026, doi. 10.1093/bioinformatics/bth193
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- Publication type:
- Article
Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization.
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- Plant Cell, 2019, v. 31, n. 9, p. 2010, doi. 10.1105/tpc.19.00081
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- Publication type:
- Article
CFTR Rescue by Lumacaftor (VX-809) Induces an Extensive Reorganization of Mitochondria in the Cystic Fibrosis Bronchial Epithelium.
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- Cells (2073-4409), 2022, v. 11, n. 12, p. 1938, doi. 10.3390/cells11121938
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- Publication type:
- Article
Mapping diversity in African trypanosomes using high resolution spatial proteomics.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40125-z
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- Publication type:
- Article
RNA-seq reveals the RNA binding proteins, Hfq and RsmA, play various roles in virulence, antibiotic production and genomic flux in Serratia sp. ATCC 39006.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-822
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- Publication type:
- Article
Comparative proteomics of clathrin-coated vesicles.
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- Journal of Cell Biology, 2006, v. 175, n. 4, p. 571, doi. 10.1083/jcb.200607164
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- Publication type:
- Article
A proteomic time course through the differentiation of human induced pluripotent stem cells into hepatocyte-like cells.
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- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-39400-1
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- Publication type:
- Article
N‐terminomics reveals control of Arabidopsis seed storage proteins and proteases by the Arg/N‐end rule pathway.
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- New Phytologist, 2018, v. 218, n. 3, p. 1106, doi. 10.1111/nph.14909
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- Publication type:
- Article
A proteomic approach identifies many novel palmitoylated proteins in Arabidopsis.
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- New Phytologist, 2013, v. 197, n. 3, p. 805, doi. 10.1111/nph.12077
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- Publication type:
- Article
A draft map of the mouse pluripotent stem cell spatial proteome.
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- Nature Communications, 2016, v. 7, n. 1, p. 9992, doi. 10.1038/ncomms9992
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- Publication type:
- Article
Expression proteomics of UPF1 knockdown in HeLa cells reveals autoregulation of hnRNP A2/B1 mediated by alternative splicing resulting in nonsense-mediated mRNA decay.
- Published in:
- BMC Genomics, 2010, v. 11, n. 1, p. 1, doi. 10.1186/1471-2164-11-565
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- Publication type:
- Article
Expression proteomics of UPF1 knockdown in HeLa cells reveals autoregulation of hnRNP A2/B1 mediated by alternative splicing resulting in nonsense-mediated mRNA decay.
- Published in:
- BMC Genomics, 2010, v. 11, p. 565, doi. 10.1186/1471-2164-11-565
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- Publication type:
- Article
i-Tracker: For quantitative proteomics using iTRAQ.
- Published in:
- BMC Genomics, 2005, v. 6, p. 145, doi. 10.1186/1471-2164-6-145
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- Publication type:
- Article
PEDRo: A database for storing, searching and disseminating experimental proteomics data.
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- BMC Genomics, 2004, v. 5, p. 68, doi. 10.1186/1471-2164-5-68
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- Publication type:
- Article
The Parkinson's Disease-Linked Protein DJ-1 Associates with Cytoplasmic mRNP Granules During Stress and Neurodegeneration.
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- Molecular Neurobiology, 2019, v. 56, n. 1, p. 61, doi. 10.1007/s12035-018-1084-y
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- Publication type:
- Article
Moving Profiling Spatial Proteomics Beyond Discrete Classification.
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- Proteomics, 2020, v. 20, n. 23, p. 1, doi. 10.1002/pmic.201900392
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- Publication type:
- Article
Spectral Libraries for SWATH-MS Assays for Drosophila melanogaster and Solanum lycopersicum.
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- Proteomics, 2017, v. 17, n. 21, p. n/a, doi. 10.1002/pmic.201700216
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- Publication type:
- Article
Time, space, and disorder in the expanding proteome universe.
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- Proteomics, 2017, v. 17, n. 7, p. n/a, doi. 10.1002/pmic.201600399
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- Publication type:
- Article
Identification of the cis-molecular neighbours of the immune checkpoint protein B7-H4 in the breast cancer cell-line SK-BR-3 by proteomic proximity labelling.
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- International Journal of Oncology, 2020, v. 57, n. 1, p. 87, doi. 10.3892/ijo.2020.5037
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- Publication type:
- Article
Genetic and proteomic analysis of the role of luxS in the enteric phytopathogen, Erwinia carotovora.
- Published in:
- Molecular Plant Pathology, 2006, v. 7, n. 1, p. 31, doi. 10.1111/j.1364-3703.2005.00314.x
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- Publication type:
- Article
Multiple marker abundance profiling: combining selected reaction monitoring and data-dependent acquisition for rapid estimation of organelle abundance in subcellular samples.
- Published in:
- Plant Journal, 2017, v. 92, n. 6, p. 1202, doi. 10.1111/tpj.13743
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- Publication type:
- Article
Interrogation of RNA-protein interaction dynamics in bacterial growth.
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- Molecular Systems Biology, 2024, v. 20, n. 5, p. 573, doi. 10.1038/s44320-024-00031-y
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- Publication type:
- Article
Learning from Heterogeneous Data Sources: An Application in Spatial Proteomics.
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- PLoS Computational Biology, 2016, v. 12, n. 5, p. 1, doi. 10.1371/journal.pcbi.1004920
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- Publication type:
- Article
Proteomic analysis in primary T cells reveals IL-7 alters T cell receptor thresholding via CYTIP/cytohesin/LFA-1 localisation and activation.
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- Biochemical Journal, 2022, v. 479, n. 3, p. 225, doi. 10.1042/BCJ20210313
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- Publication type:
- Article
Phosphorylation of the dimeric cytoplasmic domain of the phytosulfokine receptor, PSKR1.
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- Biochemical Journal, 2016, v. 473, n. 19, p. 3081, doi. 10.1042/BCJ20160593
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- Publication type:
- Article
Ethylene Receptors, CTRs and EIN2 Target Protein Identification and Quantification Through Parallel Reaction Monitoring During Tomato Fruit Ripening.
- Published in:
- Frontiers in Plant Science, 2018, p. N.PAG, doi. 10.3389/fpls.2018.01626
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- Publication type:
- Article
Combining LOPIT with differential ultracentrifugation for high-resolution spatial proteomics.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-08191-w
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- Publication type:
- Article
Efficient recovery of the RNA-bound proteome and protein-bound transcriptome using phase separation (OOPS).
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- Nature Protocols, 2020, v. 15, n. 8, p. 2568, doi. 10.1038/s41596-020-0344-2
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- Publication type:
- Article
Using hyperLOPIT to perform high-resolution mapping of the spatial proteome.
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- Nature Protocols, 2017, v. 12, n. 6, p. 1110, doi. 10.1038/nprot.2017.026
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- Publication type:
- Article
Proteome labeling and protein identification in specific tissues and at specific developmental stages in an animal.
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- Nature Biotechnology, 2014, v. 32, n. 5, p. 465, doi. 10.1038/nbt.2860
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- Publication type:
- Article
Guidelines for reporting the use of gel electrophoresis in proteomics.
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- 2008
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- Publication type:
- Letter
The minimum information about a proteomics experiment (MIAPE).
- Published in:
- Nature Biotechnology, 2007, v. 25, n. 8, p. 887, doi. 10.1038/nbt1329
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- Publication type:
- Article
A systematic approach to modeling, capturing, and disseminating proteomics experimental data.
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- Nature Biotechnology, 2003, v. 21, n. 3, p. 247, doi. 10.1038/nbt0303-247
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- Publication type:
- Article
Co-complex protein membership evaluation using Maximum Entropy on GO ontology and InterPro annotation.
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- Bioinformatics, 2018, v. 34, n. 11, p. 1884, doi. 10.1093/bioinformatics/btx803
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- Publication type:
- Article
Spatiotemporal proteomic profiling of the pro-inflammatory response to lipopolysaccharide in the THP-1 human leukaemia cell line.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26000-9
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- Publication type:
- Article
Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-19840-4
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- Publication type:
- Article
Dynamic Proteomic Profiling of Extra-Embryonic Endoderm Differentiation in Mouse Embryonic Stem Cells.
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- Stem Cells, 2015, v. 33, n. 9, p. 2712, doi. 10.1002/stem.2067
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- Publication type:
- Article
In-depth characterization of the tomato fruit pericarp proteome.
- Published in:
- Proteomics, 2017, v. 17, n. 1/2, p. n/a, doi. 10.1002/pmic.201600406
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- Publication type:
- Article
Analysis of Drosophila melanogaster proteome dynamics during embryonic development by a combination of label-free proteomics approaches.
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- Proteomics, 2016, v. 16, n. 15/16, p. 2068, doi. 10.1002/pmic.201500482
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- Publication type:
- Article
Analysis of temperature-mediated changes in the wine yeast Saccharomyces bayanus var uvarum. An oenological study of how the protein content influences wine quality.
- Published in:
- Proteomics, 2016, v. 16, n. 4, p. 576, doi. 10.1002/pmic.201500137
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- Publication type:
- Article
Focus on Quantitative Proteomics.
- Published in:
- 2015
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- Publication type:
- Editorial
Quantitative proteomics analysis of the Arg/N-end rule pathway of targeted degradation in Arabidopsis roots.
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- Proteomics, 2015, v. 15, n. 14, p. 2447, doi. 10.1002/pmic.201400530
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- Publication type:
- Article
Interlaboratory studies and initiatives developing standards for proteomics.
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- Proteomics, 2013, v. 13, n. 6, p. 904, doi. 10.1002/pmic.201200532
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- Publication type:
- Article
The ABRF Proteomics Research Group Studies: Educational exercises for qualitative and quantitative proteomic analyses.
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- Proteomics, 2011, v. 11, n. 8, p. 1371, doi. 10.1002/pmic.201000736
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- Publication type:
- Article
Challenges for proteomics core facilities.
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- Proteomics, 2011, v. 11, n. 6, p. 1017, doi. 10.1002/pmic.201000693
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- Publication type:
- Article
Improved sub-cellular resolution via simultaneous analysis of organelle proteomics data across varied experimental conditions.
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- Proteomics, 2010, v. 10, n. 23, p. 4213, doi. 10.1002/pmic.201000359
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- Publication type:
- Article
Organelle proteomics experimental designs and analysis.
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- Proteomics, 2010, v. 10, n. 22, p. 3957, doi. 10.1002/pmic.201000244
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- Publication type:
- Article
Investigating sample pooling strategies for DIGE experiments to address biological variability.
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- Proteomics, 2009, v. 9, n. 2, p. 388, doi. 10.1002/pmic.200800485
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- Publication type:
- Article
Sub-cellular localization of membrane proteins.
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- Proteomics, 2008, v. 8, n. 19, p. 3991, doi. 10.1002/pmic.200800217
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- Publication type:
- Article
Identification by 2-D DIGE of apoplastic proteins regulated by oligogalacturonides in Arabidopsis thaliana.
- Published in:
- Proteomics, 2008, v. 8, n. 5, p. 1042, doi. 10.1002/pmic.200700523
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- Publication type:
- Article