Found: 25
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Untangling Extracellular Proteasome-Osteopontin Circuit Dynamics in Multiple Sclerosis.
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- Cells (2073-4409), 2019, v. 8, n. 3, p. 262, doi. 10.3390/cells8030262
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- Article
iBench: A ground truth approach for advanced validation of mass spectrometry identification method.
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- Proteomics, 2023, v. 23, n. 2, p. 1, doi. 10.1002/pmic.202200271
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- Article
Database search engines and target database features impinge upon the identification of post‐translationally cis‐spliced peptides in HLA class I immunopeptidomes.
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- Proteomics, 2022, v. 22, n. 10, p. 1, doi. 10.1002/pmic.202100226
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- Article
Large database for the analysis and prediction of spliced and non-spliced peptide generation by proteasomes.
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- Scientific Data, 2020, v. 7, n. 1, p. 1, doi. 10.1038/s41597-020-0487-6
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- Article
Calibrating spatio-temporal models of leukocyte dynamics against in vivo live-imaging data using approximate Bayesian computation.
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- Integrative Biology, 2012, v. 4, n. 3, p. 335, doi. 10.1039/c2ib00175f
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- Article
A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation.
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- Nature Protocols, 2014, v. 9, n. 2, p. 439, doi. 10.1038/nprot.2014.025
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- Article
Maximizing the Information Content of Experiments in Systems Biology.
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- PLoS Computational Biology, 2013, v. 9, n. 1, p. 1, doi. 10.1371/journal.pcbi.1002888
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- Article
The 20S Proteasome Splicing Activity Discovered by SpliceMet.
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- PLoS Computational Biology, 2010, v. 6, n. 6, p. 1, doi. 10.1371/journal.pcbi.1000830
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- Article
PEITH(Θ): perfecting experiments with information theory in Python with GPU support.
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- Bioinformatics, 2018, v. 34, n. 7, p. 1249, doi. 10.1093/bioinformatics/btx776
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- Article
ER‐aminopeptidase 1 determines the processing and presentation of an immunotherapy‐relevant melanoma epitope.
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- European Journal of Immunology, 2020, v. 50, n. 2, p. 270, doi. 10.1002/eji.201948116
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- Article
CD8<sup>+</sup> T cells of Listeria monocytogenes-infected mice recognize both linear and spliced proteasome products.
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- European Journal of Immunology, 2016, v. 46, n. 5, p. 1109, doi. 10.1002/eji.201545989
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- Article
Proteasome isoforms exhibit only quantitative differences in cleavage and epitope generation.
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- European Journal of Immunology, 2014, v. 44, n. 12, p. 3508, doi. 10.1002/eji.201444902
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- Article
Single Cell Phenotyping Reveals Heterogeneity Among Hematopoietic Stem Cells Following Infection.
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- Stem Cells, 2017, v. 35, n. 11, p. 2292, doi. 10.1002/stem.2692
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- Article
Extracellular proteasome-osteopontin circuit regulates cell migration with implications in multiple sclerosis.
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- Scientific Reports, 2017, p. 43718, doi. 10.1038/srep43718
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- Article
Modelling Proteasome and Proteasome Regulator Activities.
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- Biomolecules (2218-273X), 2014, v. 4, n. 2, p. 585, doi. 10.3390/biom4020585
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- Article
InvitroSPI and a large database of proteasome-generated spliced and non-spliced peptides.
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- Scientific Data, 2023, v. 10, n. 1, p. 1, doi. 10.1038/s41597-022-01890-6
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- Article
P38 and JNK have opposing effects on persistence of in vivo leukocyte migration in zebrafish.
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- Immunology & Cell Biology, 2013, v. 91, n. 1, p. 60, doi. 10.1038/icb.2012.57
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- Article
An Unexpected Major Role for Proteasome-Catalyzed Peptide Splicing in Generation of T Cell Epitopes: Is There Relevance for Vaccine Development?
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- Frontiers in Immunology, 2017, p. 1, doi. 10.3389/fimmu.2017.01441
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- Article
Protein degradation by human 20S proteasomes elucidates the interplay between peptide hydrolysis and splicing.
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- Nature Communications, 2024, p. 1, doi. 10.1038/s41467-024-45339-3
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- Article
GPU accelerated biochemical network simulation.
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- Bioinformatics, 2011, v. 27, n. 6, p. 874, doi. 10.1093/bioinformatics/btr015
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- Article
ABC-SysBio—approximate Bayesian computation in Python with GPU support.
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- Bioinformatics, 2010, v. 26, n. 14, p. 1797, doi. 10.1093/bioinformatics/btq278
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- Article
An in silico—in vitro Pipeline Identifying an HLA-A<sup>*</sup>02:01<sup>+</sup> KRAS G12V<sup>+</sup> Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.
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- Frontiers in Immunology, 2019, v. 10, p. 1, doi. 10.3389/fimmu.2019.02572
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- Article
Response: Commentary: An In Silico–In Vitro Pipeline Identifying an HLA-A*02:01+ KRAS G12V+ Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.
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- Frontiers in Immunology, 2021, v. 12, p. 1, doi. 10.3389/fimmu.2021.679836
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- Article
Potential Mimicry of Viral and Pancreatic β Cell Antigens Through Non-Spliced and cis -Spliced Zwitter Epitope Candidates in Type 1 Diabetes.
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- Frontiers in Immunology, 2021, v. 11, p. N.PAG, doi. 10.3389/fimmu.2021.656451
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- Article
Proteasome-Generated cis -Spliced Peptides and Their Potential Role in CD8<sup>+</sup> T Cell Tolerance.
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- Frontiers in Immunology, 2021, v. 11, p. N.PAG, doi. 10.3389/fimmu.2021.614276
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- Article