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Biophysical Investigation of RNA ⋅ DNA : DNA Triple Helix and RNA : DNA Heteroduplex Formation by the lncRNAs MEG3 and Fendrr.
Published in:
ChemBioChem, 2024, v. 25, n. 10, p. 1, doi. 10.1002/cbic.202400049
By:
- Krause, Nina M.;
- Bains, Jasleen K.;
- Blechar, Julius;
- Richter, Christian;
- Bessi, Irene;
- Grote, Phillip;
- Leisegang, Matthias S.;
- Brandes, Ralf P.;
- Schwalbe, Harald
Publication type:
Article
HIF1α-AS1 is a DNA:DNA:RNA triplex-forming lncRNA interacting with the HUSH complex.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34252-2
By:
- Leisegang, Matthias S.;
- Bains, Jasleen Kaur;
- Seredinski, Sandra;
- Oo, James A.;
- Krause, Nina M.;
- Kuo, Chao-Chung;
- Günther, Stefan;
- Sentürk Cetin, Nevcin;
- Warwick, Timothy;
- Cao, Can;
- Boos, Frederike;
- Izquierdo Ponce, Judit;
- Haydar, Shaza;
- Bednarz, Rebecca;
- Valasarajan, Chanil;
- Fuhrmann, Dominik C.;
- Preussner, Jens;
- Looso, Mario;
- Pullamsetti, Soni S.;
- Schulz, Marcel H.
Publication type:
Article
The association of late-acting snoRNPs with human pre-ribosomal complexes requires the RNA helicase DDX21.
Published in:
Nucleic Acids Research, 2015, v. 43, n. 1, p. 553, doi. 10.1093/nar/gku1291
By:
- Sloan, Katherine E.;
- Leisegang, Matthias S.;
- Doebele, Carmen;
- Ramírez, Ana S.;
- Simm, Stefan;
- Safferthal, Charlotta;
- Kretschmer, Jens;
- Schorge, Tobias;
- Markoutsa, Stavroula;
- Haag, Sara;
- Karas, Michael;
- Ebersberger, Ingo;
- Schleiff, Enrico;
- Watkins, Nicholas J.;
- Bohnsack, Markus T.
Publication type:
Article
The evolution of the ribosome biogenesis pathway from a yeast perspective.
Published in:
Nucleic Acids Research, 2014, v. 42, n. 3, p. 1509, doi. 10.1093/nar/gkt1137
By:
- Ebersberger, Ingo;
- Simm, Stefan;
- Leisegang, Matthias S.;
- Schmitzberger, Peter;
- Mirus, Oliver;
- von Haeseler, Arndt;
- Bohnsack, Markus T.;
- Schleiff, Enrico
Publication type:
Article
The Bowen–Conradi syndrome protein Nep1 (Emg1) has a dual role in eukaryotic ribosome biogenesis, as an essential assembly factor and in the methylation of Ψ1191 in yeast 18S rRNA.
Published in:
Nucleic Acids Research, 2011, v. 39, n. 4, p. 1526, doi. 10.1093/nar/gkq931
By:
- Meyer, Britta;
- Wurm, Jan Philip;
- Kötter, Peter;
- Leisegang, Matthias S.;
- Schilling, Valeska;
- Buchhaupt, Markus;
- Held, Martin;
- Bahr, Ute;
- Karas, Michael;
- Heckel, Alexander;
- Bohnsack, Markus T.;
- Wöhnert, Jens;
- Entian, Karl-Dieter
Publication type:
Article
ADPGK‐AS1 long noncoding RNA switches macrophage metabolic and phenotypic state to promote lung cancer growth.
Published in:
EMBO Journal, 2023, v. 42, n. 18, p. 1, doi. 10.15252/embj.2022111620
By:
- Karger, Annika;
- Mansouri, Siavash;
- Leisegang, Matthias S;
- Weigert, Andreas;
- Günther, Stefan;
- Kuenne, Carsten;
- Wittig, Ilka;
- Zukunft, Sven;
- Klatt, Stephan;
- Aliraj, Blerina;
- Klotz, Laura V;
- Winter, Hauke;
- Mahavadi, Poornima;
- Fleming, Ingrid;
- Ruppert, Clemens;
- Witte, Biruta;
- Alkoudmani, Ibrahim;
- Gattenlöhner, Stefan;
- Grimminger, Friedrich;
- Seeger, Werner
Publication type:
Article
A high-definition native polyacrylamide gel electrophoresis system for the analysis of membrane complexes.
Published in:
Plant Journal, 2011, v. 67, n. 1, p. 181, doi. 10.1111/j.1365-313X.2011.04577.x
By:
- Ladig, Roman;
- Sommer, Maik S.;
- Hahn, Alexander;
- Leisegang, Matthias S.;
- Papasotiriou, Dimitrios G.;
- Ibrahim, Mohamed;
- Elkehal, Rajae;
- Karas, Michael;
- Zickermann, Volker;
- Gutensohn, Michael;
- Brandt, Ulrich;
- Klösgen, Ralf Bernd;
- Schleiff, Enrico
Publication type:
Article
Pleiotropic effects of laminar flow and statins depend on the Krüppel-like factor-induced lncRNA MANTIS.
Published in:
European Heart Journal, 2019, v. 40, n. 30, p. 2523, doi. 10.1093/eurheartj/ehz393
By:
- Leisegang, Matthias S;
- Bibli, Sofia-Iris;
- Günther, Stefan;
- Pflüger-Müller, Beatrice;
- Oo, James A;
- Höper, Cindy;
- Seredinski, Sandra;
- Yekelchyk, Michail;
- Schmitz-Rixen, Thomas;
- Schürmann, Christoph;
- Hu, Jiong;
- Looso, Mario;
- Sigala, Fragiska;
- Boon, Reinier A;
- Fleming, Ingrid;
- Brandes, Ralf P
Publication type:
Article
The polarity protein Scrib limits atherosclerosis development in mice.
Published in:
Cardiovascular Research, 2019, v. 115, n. 14, p. 1963, doi. 10.1093/cvr/cvz093
By:
- Schürmann, Christoph;
- Dienst, Franziska L;
- Pálfi, Katalin;
- Vasconez, Andrea E;
- Oo, James A;
- Wang, ShengPeng;
- Buchmann, Giulia K;
- Offermanns, Stefan;
- van de Sluis, Bart;
- Leisegang, Matthias S;
- Günther, Stefan;
- Humbert, Patrick O;
- Lee, Eunjee;
- Zhu, Jun;
- Weigert, Andreas;
- Mathoor, Praveen;
- Wittig, Ilka;
- Kruse, Christoph;
- Brandes, Ralf P
Publication type:
Article
Long non-coding RNAs: novel regulators of cellular physiology and function.
Published in:
Pflügers Archiv: European Journal of Physiology, 2022, v. 474, n. 2, p. 191, doi. 10.1007/s00424-021-02641-z
By:
- Oo, James A.;
- Brandes, Ralf P.;
- Leisegang, Matthias S.
Publication type:
Article
Thymosin beta-4x LINCs SPAAR to its non-coding function.
Published in:
Cardiovascular Research, 2020, v. 116, n. 12, p. 1927, doi. 10.1093/cvr/cvaa098
By:
- Brandes, Ralf P;
- Oo, James A;
- Leisegang, Matthias S
Publication type:
Article
RUNX1 interacts with lncRNA SMANTIS to regulate monocytic cell functions.
Published in:
Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06794-2
By:
- Weiss, Lisa M.;
- Warwick, Timothy;
- Zehr, Simonida;
- Günther, Stefan;
- Wolf, Sebastian;
- Schmachtel, Tessa;
- Izquierdo Ponce, Judit;
- Pálfi, Katalin;
- Teichmann, Tom;
- Schneider, Alicia;
- Stötzel, Julia;
- Knapp, Stefan;
- Weigert, Andreas;
- Savai, Rajkumar;
- Rieger, Michael A.;
- Oellerich, Thomas;
- Wittig, Ilka;
- Oo, James A.;
- Brandes, Ralf P.;
- Leisegang, Matthias S.
Publication type:
Article
ZNF354C is a transcriptional repressor that inhibits endothelial angiogenic sprouting.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-76193-0
By:
- Oo, James A.;
- Irmer, Barnabas;
- Günther, Stefan;
- Warwick, Timothy;
- Pálfi, Katalin;
- Izquierdo Ponce, Judit;
- Teichmann, Tom;
- Pflüger-Müller, Beatrice;
- Gilsbach, Ralf;
- Brandes, Ralf P.;
- Leisegang, Matthias S.
Publication type:
Article
The Histone Demethylase PHF8 Is Essential for Endothelial Cell Migration.
Published in:
PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0146645
By:
- Gu, Lunda;
- Hitzel, Juliane;
- Moll, Franziska;
- Kruse, Christoph;
- Malik, Randa Abdel;
- Preussner, Jens;
- Looso, Mario;
- Leisegang, Matthias S.;
- Steinhilber, Dieter;
- Brandes, Ralf P.;
- Fork, Christian
Publication type:
Article
The histone demethylase Jarid1b mediates angiotensin II‐induced endothelial dysfunction by controlling the 3′UTR of soluble epoxide hydrolase.
Published in:
Acta Physiologica, 2019, v. 225, n. 1, p. N.PAG, doi. 10.1111/apha.13168
By:
- Vasconez, Andrea E.;
- Janetzko, Patrick;
- Oo, James A.;
- Pflüger‐Müller, Beatrice;
- Ratiu, Corina;
- Gu, Lunda;
- Helin, Kristian;
- Geisslinger, Gerd;
- Fleming, Ingrid;
- Schröder, Katrin;
- Fork, Christian;
- Brandes, Ralf P.;
- Leisegang, Matthias S.
Publication type:
Article
DGK and DZHK position paper on genome editing: basic science applications and future perspective.
Published in:
Basic Research in Cardiology, 2021, v. 116, n. 1, p. 1, doi. 10.1007/s00395-020-00839-3
By:
- Brandes, Ralf P.;
- Dueck, Anne;
- Engelhardt, Stefan;
- Kaulich, Manuel;
- Kupatt, Christian;
- De Angelis, Maria Teresa;
- Leisegang, Matthias S.;
- le Noble, Ferdinand;
- Moretti, Alessandra;
- Müller, Oliver J.;
- Skryabin, Boris V.;
- Thum, Thomas;
- Wurst, Wolfgang
Publication type:
Article
The endocannabinoid anandamide has an anti-inflammatory effect on CCL2 expression in vascular smooth muscle cells.
Published in:
Basic Research in Cardiology, 2020, v. 115, n. 3, p. 1, doi. 10.1007/s00395-020-0793-3
By:
- Pflüger-Müller, Beatrice;
- Oo, James A.;
- Heering, Jan;
- Warwick, Timothy;
- Proschak, Ewgenij;
- Günther, Stefan;
- Looso, Mario;
- Rezende, Flávia;
- Fork, Christian;
- Geisslinger, Gerd;
- Thomas, Dominique;
- Gurke, Robert;
- Steinhilber, Dieter;
- Schulz, Marcel;
- Leisegang, Matthias S.;
- Brandes, Ralf P.
Publication type:
Article
ncOrtho: efficient and reliable identification of miRNA orthologs.
Published in:
Nucleic Acids Research, 2023, v. 51, n. 13, p. e71, doi. 10.1093/nar/gkad467
By:
- Langschied, Felix;
- Leisegang, Matthias S;
- Brandes, Ralf P;
- Ebersberger, Ingo
Publication type:
Article
Integrative analysis of epigenetics data identifies gene-specific regulatory elements.
Published in:
Nucleic Acids Research, 2021, v. 49, n. 18, p. 10397, doi. 10.1093/nar/gkab798
By:
- Schmidt, Florian;
- Marx, Alexander;
- Baumgarten, Nina;
- Hebel, Marie;
- Wegner, Martin;
- Kaulich, Manuel;
- Leisegang, Matthias S;
- Brandes, Ralf P;
- Göke, Jonathan;
- Vreeken, Jilles;
- Schulz, Marcel H
Publication type:
Article
The histone demethylase PHF8 facilitates alternative splicing of the histocompatibility antigen HLA‐G.
Published in:
FEBS Letters, 2019, v. 593, n. 5, p. 487, doi. 10.1002/1873-3468.13337
By:
- Leisegang, Matthias S.;
- Gu, Lunda;
- Preussner, Jens;
- Günther, Stefan;
- Hitzel, Juliane;
- Ratiu, Corina;
- Weigert, Andreas;
- Chen, Wei;
- Schwarz, Eva C.;
- Looso, Mario;
- Fork, Christian;
- Brandes, Ralf P.
Publication type:
Article
Cover Feature: Optimization of the Lead Compound NVP‐BHG712 as a Colorectal Cancer Inhibitor (Chem. Eur. J. 23/2023).
Published in:
Chemistry - A European Journal, 2023, v. 29, n. 23, p. 1, doi. 10.1002/chem.202300918
By:
- Tröster, Alix;
- DiPrima, Michael;
- Jores, Nathalie;
- Kudlinzki, Denis;
- Sreeramulu, Sridhar;
- Gande, Santosh L.;
- Linhard, Verena;
- Ludig, Damian;
- Schug, Alexander;
- Saxena, Krishna;
- Reinecke, Maria;
- Heinzlmeir, Stephanie;
- Leisegang, Matthias S.;
- Wollenhaupt, Jan;
- Lennartz, Frank;
- Weiss, Manfred S.;
- Kuster, Bernhard;
- Tosato, Giovanna;
- Schwalbe, Harald
Publication type:
Article
Optimization of the Lead Compound NVP‐BHG712 as a Colorectal Cancer Inhibitor.
Published in:
Chemistry - A European Journal, 2023, v. 29, n. 23, p. 1, doi. 10.1002/chem.202203967
By:
- Tröster, Alix;
- DiPrima, Michael;
- Jores, Nathalie;
- Kudlinzki, Denis;
- Sreeramulu, Sridhar;
- Gande, Santosh L.;
- Linhard, Verena;
- Ludig, Damian;
- Schug, Alexander;
- Saxena, Krishna;
- Reinecke, Maria;
- Heinzlmeir, Stephanie;
- Leisegang, Matthias S.;
- Wollenhaupt, Jan;
- Lennartz, Frank;
- Weiss, Manfred S.;
- Kuster, Bernhard;
- Tosato, Giovanna;
- Schwalbe, Harald
Publication type:
Article
Computational Methods to Study DNA:DNA:RNA Triplex Formation by lncRNAs.
Published in:
Non-Coding RNA, 2023, v. 9, n. 1, p. 10, doi. 10.3390/ncrna9010010
By:
- Warwick, Timothy;
- Brandes, Ralf P.;
- Leisegang, Matthias S.
Publication type:
Article
LncRNAs Are Key Regulators of Transcription Factor-Mediated Endothelial Stress Responses.
Published in:
International Journal of Molecular Sciences, 2024, v. 25, n. 17, p. 9726, doi. 10.3390/ijms25179726
By:
- Lam, Frederike;
- Leisegang, Matthias S.;
- Brandes, Ralf P.
Publication type:
Article
Defining the core proteome of the chloroplast envelope membranes.
Published in:
Frontiers in Plant Science, 2013, v. 4, p. 1, doi. 10.3389/fpls.2013.00011
By:
- Simm, Stefan;
- Papasotiriou, Dimitrios G.;
- Ibrahim, Mohamed;
- Leisegang, Matthias S.;
- Müller, Bernd;
- Schorge, Tobias;
- Karas, Michael;
- Mirus, Oliver;
- Sommer, Maik S.;
- Schleiff, Enrico
Publication type:
Article
Aging-regulated anti-apoptotic long non-coding RNA Sarrah augments recovery from acute myocardial infarction.
Published in:
Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-15995-2
By:
- Trembinski, D. Julia;
- Bink, Diewertje I.;
- Theodorou, Kosta;
- Sommer, Janina;
- Fischer, Ariane;
- van Bergen, Anke;
- Kuo, Chao-Chung;
- Costa, Ivan G.;
- Schürmann, Christoph;
- Leisegang, Matthias S.;
- Brandes, Ralf P.;
- Alekseeva, Tijna;
- Brill, Boris;
- Wietelmann, Astrid;
- Johnson, Christopher N.;
- Spring-Connell, Alexander;
- Kaulich, Manuel;
- Werfel, Stanislas;
- Engelhardt, Stefan;
- Hirt, Marc N.
Publication type:
Article
Exportin T and Exportin 5: tRNA and miRNA biogenesis - and beyond.
Published in:
Biological Chemistry, 2012, v. 393, n. 7, p. 599, doi. 10.1515/hsz-2012-0146
By:
- Leisegang, Matthias S.;
- Martin, Roman;
- Ramírez, Ana S.;
- Bohnsack, Markus T.
Publication type:
Article

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