OpenURL Connection Search

Select item for more details and to access through your institution.

Cytosolic 5'-nucleotidase 1A autoimmunity in sporadic inclusion body myositis.
Published in:
2013
By:
- Benjamin Larman, H;
- Salajegheh, Mohammad;
- Nazareno, Remedios;
- Lam, Theresa;
- Sauld, John;
- Steen, Hanno;
- Won Kong, Sek;
- Pinkus, Jack L;
- Amato, Anthony A;
- Elledge, Stephen J;
- Greenberg, Steven A;
- Larman, H Benjamin;
- Kong, Sek Won
Publication type:
journal article
Integration of flow-dependent endothelial phenotypes by Kruppel-like factor 2.
Published in:
2006
By:
- Parmar, Kush M.;
- Larman, H. Benjamin;
- Dai, Guohao;
- Zhang, Yuzhi;
- Wang, Eric T.;
- Moorthy, Sripriya N.;
- Kratz, Johannes R.;
- Lin, Zhiyong;
- Jain, Mukesh K.;
- Gimbrone Jr, Michael A.;
- García-Cardeña, Guillermo;
- Gimbrone, Michael A Jr;
- García-Cardeña, Guillermo
Publication type:
journal article
Multiplexed analysis of fixed tissue RNA using Ligation in situ Hybridization.
Published in:
Nucleic Acids Research, 2017, v. 45, n. 14, p. 1, doi. 10.1093/nar/gkx471
By:
- Credle, Joel J.;
- Itoh, Christopher Y.;
- Yuan, Tiezheng;
- Sharma, Rajni;
- Scott, Erick R.;
- Workman, Rachael E.;
- Yunfan Fan;
- Housseau, Franck;
- Llosa, Nicolas J.;
- Bell, W. Robert.;
- Miller, Heather;
- Zhang, Sean X.;
- Timp, Winston;
- Larman, H. Benjamin
Publication type:
Article
Sensitive, multiplex and direct quantification of RNA sequences using a modified RASL assay.
Published in:
Nucleic Acids Research, 2014, v. 42, n. 14, p. 9146, doi. 10.1093/nar/gku636
By:
- Larman, H. Benjamin;
- Scott, Erick R.;
- Wogan, Megan;
- Oliveira, Glenn;
- Torkamani, Ali;
- Schultz, Peter G.
Publication type:
Article
Author Correction: DeepTCR is a deep learning framework for revealing sequence concepts within T-cell repertoires.
Published in:
2021
By:
- Sidhom, John-William;
- Larman, H. Benjamin;
- Pardoll, Drew M.;
- Baras, Alexander S.
Publication type:
Correction Notice
DeepTCR is a deep learning framework for revealing sequence concepts within T-cell repertoires.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21879-w
By:
- Sidhom, John-William;
- Larman, H. Benjamin;
- Pardoll, Drew M.;
- Baras, Alexander S.
Publication type:
Article
DeepTCR is a deep learning framework for revealing sequence concepts within T-cell repertoires.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21879-w
By:
- Sidhom, John-William;
- Larman, H. Benjamin;
- Pardoll, Drew M.;
- Baras, Alexander S.
Publication type:
Article
Protein interaction discovery using parallel analysis of translated ORFs (PLATO).
Published in:
Nature Biotechnology, 2013, v. 31, n. 4, p. 331, doi. 10.1038/nbt.2539
By:
- Zhu, Jian;
- Larman, H Benjamin;
- Gao, Geng;
- Somwar, Romel;
- Zhang, Zijuan;
- Laserson, Uri;
- Ciccia, Alberto;
- Pavlova, Natalya;
- Church, George;
- Zhang, Wei;
- Kesari, Santosh;
- Elledge, Stephen J
Publication type:
Article
Autoantigen discovery with a synthetic human peptidome.
Published in:
Nature Biotechnology, 2011, v. 29, n. 6, p. 535, doi. 10.1038/nbt.1856
By:
- Larman, H. Benjamin;
- Zhenming Zhao;
- Laserson, Uri;
- Li, Mamie Z.;
- Ciccia, Alberto;
- Gakidis, M. Angelica Martinez;
- Church, George M.;
- Kesari, Santosh;
- LeProust, Emily M.;
- Solimini, Nicole L.;
- Elledge, Stephen J.
Publication type:
Article
Detecting and quantifying antibody reactivity in PhIP-Seq data with BEER.
Published in:
Bioinformatics, 2022, v. 38, n. 19, p. 4647, doi. 10.1093/bioinformatics/btac555
By:
- Chen, Athena;
- Kammers, Kai;
- Larman, H Benjamin;
- Scharpf, Robert B;
- Ruczinski, Ingo
Publication type:
Article
Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-45601-8
By:
- Liebhoff, Anna-Maria;
- Venkataraman, Thiagarajan;
- Morgenlander, William R.;
- Na, Miso;
- Kula, Tomasz;
- Waugh, Kathleen;
- Morrison, Charles;
- Rewers, Marian;
- Longman, Randy;
- Round, June;
- Elledge, Stephen;
- Ruczinski, Ingo;
- Langmead, Ben;
- Larman, H. Benjamin
Publication type:
Article
LINE-1 ORF2p expression is nearly imperceptible in human cancers.
Published in:
Mobile DNA, 2019, v. 11, n. 1, p. 1, doi. 10.1186/s13100-019-0191-2
By:
- Ardeljan, Daniel;
- Wang, Xuya;
- Oghbaie, Mehrnoosh;
- Taylor, Martin S.;
- Husband, David;
- Deshpande, Vikram;
- Steranka, Jared P.;
- Gorbounov, Mikhail;
- Yang, Wan Rou;
- Sie, Brandon;
- Larman, H. Benjamin;
- Jiang, Hua;
- Molloy, Kelly R.;
- Altukhov, Ilya;
- Li, Zhi;
- McKerrow, Wilson;
- Fenyö, David;
- Burns, Kathleen H.;
- LaCava, John
Publication type:
Article
Robust dengue virus infection in bat cells and limited innate immune responses coupled with positive serology from bats in IndoMalaya and Australasia.
Published in:
Cellular & Molecular Life Sciences, 2020, v. 77, n. 8, p. 1607, doi. 10.1007/s00018-019-03242-x
By:
- Irving, Aaron T.;
- Rozario, Pritisha;
- Kong, Pui-San;
- Luko, Katarina;
- Gorman, Jeffrey J.;
- Hastie, Marcus L.;
- Chia, Wan Ni;
- Mani, Shailendra;
- Lee, Benjamin PY-H.;
- Smith, Gavin J. D.;
- Mendenhall, Ian H.;
- Larman, H. Benjamin;
- Elledge, Stephen J.;
- Wang, Lin-Fa
Publication type:
Article
Quantitative assessment of LASSO probe assembly and long-read multiplexed cloning.
Published in:
BMC Biotechnology, 2019, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12896-019-0547-1
By:
- Shukor, Syukri;
- Tamayo, Alfred;
- Tosi, Lorenzo;
- Larman, H. Benjamin;
- Parekkadan, Biju
Publication type:
Article
HIV Antibody Profiles in HIV Controllers and Persons With Treatment-Induced Viral Suppression.
Published in:
Frontiers in Immunology, 2021, v. 12, p. 1, doi. 10.3389/fimmu.2021.740395
By:
- Kammers, Kai;
- Chen, Athena;
- Monaco, Daniel R.;
- Hudelson, Sarah E.;
- Grant-McAuley, Wendy;
- Moore, Richard D.;
- Alter, Galit;
- Deeks, Steven G.;
- Morrison, Charles S.;
- Eller, Leigh A.;
- Blankson, Joel N.;
- Laeyendecker, Oliver;
- Ruczinski, Ingo;
- Eshleman, Susan H.;
- Larman, H. Benjamin
Publication type:
Article
Identification of antibody targets associated with lower HIV viral load and viremic control.
Published in:
PLoS ONE, 2024, v. 19, n. 9, p. 1, doi. 10.1371/journal.pone.0305976
By:
- Grant-McAuley, Wendy;
- Morgenlander, William R.;
- Ruczinski, Ingo;
- Kammers, Kai;
- Laeyendecker, Oliver;
- Hudelson, Sarah E.;
- Thakar, Manjusha;
- Piwowar-Manning, Estelle;
- Clarke, William;
- Breaud, Autumn;
- Ayles, Helen;
- Bock, Peter;
- Moore, Ayana;
- Kosloff, Barry;
- Shanaube, Kwame;
- Meehan, Sue-Ann;
- van Deventer, Anneen;
- Fidler, Sarah;
- Hayes, Richard;
- Larman, H. Benjamin
Publication type:
Article
Chronic Dengue Virus Panencephalitis in a Patient with Progressive Dementia with Extrapyramidal Features.
Published in:
2019
By:
- Johnson, Tory P.;
- Larman, H. Benjamin;
- Lee, Myoung‐Hwa;
- Whitehead, Stephen S.;
- Kowalak, Jeffrey;
- Toro, Camilo;
- Lau, C. Christopher;
- Kim, Juyun;
- Johnson, Kory R.;
- Reoma, Lauren B.;
- Faustin, Arline;
- Pardo, Carlos A.;
- Kottapalli, Sanjay;
- Howard, Jonathan;
- Monaco, Daniel;
- Weisfeld‐Adams, James;
- Blackstone, Craig;
- Galetta, Steven;
- Snuderl, Matija;
- Gahl, William A.
Publication type:
journal article
Cytosolic 5′-nucleotidase 1A autoimmunity in sporadic inclusion body myositis.
Published in:
Annals of Neurology, 2013, v. 73, n. 3, p. 408, doi. 10.1002/ana.23840
By:
- Benjamin Larman, H.;
- Salajegheh, Mohammad;
- Nazareno, Remedios;
- Lam, Theresa;
- Sauld, John;
- Steen, Hanno;
- Won Kong, Sek;
- Pinkus, Jack L.;
- Amato, Anthony A.;
- Elledge, Stephen J.;
- Greenberg, Steven A.
Publication type:
Article
Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10.
Published in:
PLoS Pathogens, 2014, v. 10, n. 9, p. 1, doi. 10.1371/journal.ppat.1004403
By:
- Finton, Kathryn A. K.;
- Friend, Della;
- Jaffe, James;
- Gewe, Mesfin;
- Holmes, Margaret A.;
- Larman, H. Benjamin;
- Stuart, Andrew;
- Larimore, Kevin;
- Greenberg, Philip D.;
- Elledge, Stephen J.;
- Stamatatos, Leonidas;
- Strong, Roland K.
Publication type:
Article
Autoreactivity and Exceptional CDR Plasticity (but Not Unusual Polyspecificity) Hinder Elicitation of the Anti-HIV Antibody 4E10.
Published in:
PLoS Pathogens, 2013, v. 9, n. 9, p. 1, doi. 10.1371/journal.ppat.1003639
By:
- Finton, Kathryn A. K.;
- Larimore, Kevin;
- Larman, H. Benjamin;
- Friend, Della;
- Correnti, Colin;
- Rupert, Peter B.;
- Elledge, Stephen J.;
- Greenberg, Philip D.;
- Strong, Roland K.
Publication type:
Article
Prostate cancer research: The next generation; report from the 2019 Coffey‐Holden Prostate Cancer Academy Meeting.
Published in:
Prostate, 2020, v. 80, n. 2, p. 113, doi. 10.1002/pros.23934
By:
- Miyahira, Andrea K.;
- Sharp, Adam;
- Ellis, Leigh;
- Jones, Jennifer;
- Kaochar, Salma;
- Larman, H. Benjamin;
- Quigley, David A.;
- Ye, Huihui;
- Simons, Jonathan W.;
- Pienta, Kenneth J.;
- Soule, Howard R.
Publication type:
Article
PhIP-Seq Reveals Autoantibodies for Ubiquitously Expressed Antigens in Viral Myocarditis.
Published in:
Biology (2079-7737), 2022, v. 11, n. 7, p. 1055, doi. 10.3390/biology11071055
By:
- Rasquinha, Mahima T.;
- Lasrado, Ninaad;
- Petro-Turnquist, Erika;
- Weaver, Eric;
- Venkataraman, Thiagarajan;
- Anderson, Daniel;
- Laserson, Uri;
- Larman, H. Benjamin;
- Reddy, Jay
Publication type:
Article
Precision arbovirus serology with a pan-arbovirus peptidome.
Published in:
Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49461-0
By:
- Morgenlander, William R.;
- Chia, Wan Ni;
- Parra, Beatriz;
- Monaco, Daniel R.;
- Ragan, Izabela;
- Pardo, Carlos A.;
- Bowen, Richard;
- Zhong, Diana;
- Norris, Douglas E.;
- Ruczinski, Ingo;
- Durbin, Anna;
- Wang, Lin-Fa;
- Larman, H. Benjamin;
- Robinson, Matthew L.
Publication type:
Article
Loss of TDP-43 function and rimmed vacuoles persist after T cell depletion in a xenograft model of sporadic inclusion body myositis.
Published in:
Science Translational Medicine, 2022, v. 14, n. 628, p. 1, doi. 10.1126/scitranslmed.abi9196
By:
- Britson, Kyla A.;
- Ling, Jonathan P.;
- Braunstein, Kerstin E.;
- Montagne, Janelle M.;
- Kastenschmidt, Jenna M.;
- Wilson, Andrew;
- Ikenaga, Chiseko;
- Tsao, William;
- Pinal-Fernandez, Iago;
- Russell, Katelyn A.;
- Reed, Nicole;
- Mozaffar, Tahseen;
- Wagner, Kathryn R.;
- Ostrow, Lyle W.;
- Corse, Andrea M.;
- Mammen, Andrew L.;
- Villalta, S. Armando;
- Larman, H. Benjamin;
- Wong, Philip C.;
- Lloyd, Thomas E.
Publication type:
Article
Publisher Correction: PhIP-Seq characterization of serum antibodies using oligonucleotide-encoded peptidomes.
Published in:
2019
By:
- Mohan, Divya;
- Wansley, Daniel L.;
- Sie, Brandon M.;
- Noon, Muhammad S.;
- Baer, Alan N.;
- Laserson, Uri;
- Larman, H. Benjamin
Publication type:
Correction Notice
PhIP-Seq characterization of serum antibodies using oligonucleotide-encoded peptidomes.
Published in:
Nature Protocols, 2018, v. 13, n. 9, p. 1958, doi. 10.1038/s41596-018-0025-6
By:
- Mohan, Divya;
- Wansley, Daniel L.;
- Sie, Brandon M.;
- Noon, Muhammad S.;
- Baer, Alan N.;
- Laserson, Uri;
- Larman, H. Benjamin
Publication type:
Article
Discovery of protein interactions using parallel analysis of translated ORFs (PLATO)
Published in:
Nature Protocols, 2014, v. 9, n. 1, p. 90, doi. 10.1038/nprot.2013.167
By:
- Larman, H Benjamin;
- Liang, Anthony C;
- Elledge, Stephen J;
- Zhu, Jian
Publication type:
Article
Massively parallel DNA target capture using long adapter single stranded oligonucleotide (LASSO) probes assembled through a novel DNA recombinase mediated methodology.
Published in:
Biotechnology Journal, 2022, v. 17, n. 2, p. 1, doi. 10.1002/biot.202100240
By:
- Tosi, Lorenzo;
- Chkaiban, Lamia;
- Larman, Benjamin H.;
- Rosenfeld, Jeffrey A.;
- Parekkadan, Biju
Publication type:
Article
Epitope Mapping of SARS-CoV-2 Spike Antibodies in Vaccinated Kidney Transplant Recipients Reveals Poor Spike Coverage Compared to Healthy Controls.
Published in:
Journal of Infectious Diseases, 2024, v. 229, n. 5, p. 1366, doi. 10.1093/infdis/jiad534
By:
- Karaba, Andrew H;
- Morgenlander, William R;
- Johnston, Trevor S;
- Hage, Camille;
- Pekosz, Andrew;
- Durand, Christine M;
- Segev, Dorry L;
- Robien, Mark A;
- Heeger, Peter S;
- Larsen, Christian P;
- Blankson, Joel N;
- Werbel, William A;
- Larman, H Benjamin;
- Tobian, Aaron A R
Publication type:
Article
Evaluation of multi-assay algorithms for cross-sectional HIV incidence estimation in settings with universal antiretroviral treatment.
Published in:
2022
By:
- Grant-McAuley, Wendy;
- Laeyendecker, Oliver;
- Monaco, Daniel;
- Chen, Athena;
- Hudelson, Sarah E.;
- Klock, Ethan;
- Brookmeyer, Ron;
- Morrison, Douglas;
- Piwowar-Manning, Estelle;
- Morrison, Charles S.;
- Hayes, Richard;
- Ayles, Helen;
- Bock, Peter;
- Kosloff, Barry;
- Shanaube, Kwame;
- Mandla, Nomtha;
- van Deventer, Anneen;
- Ruczinski, Ingo;
- Kammers, Kai;
- Larman, H. Benjamin
Publication type:
journal article
Detecting antibody reactivities in Phage ImmunoPrecipitation Sequencing data.
Published in:
BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08869-y
By:
- Chen, Athena;
- Kammers, Kai;
- Larman, H Benjamin;
- Scharpf, Robert B.;
- Ruczinski, Ingo
Publication type:
Article

Found: 31