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A ventriculomegaly feature computational pipeline to improve the screening of normal pressure hydrocephalus on CT.
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- Journal of Neurosurgery, 2024, v. 141, n. 3, p. 822, doi. 10.3171/2023.12.JNS231780
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- Article
Predicting spatially resolved gene expression via tissue morphology using adaptive spatial GNNs.
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- Bioinformatics, 2024, v. 40, p. ii111, doi. 10.1093/bioinformatics/btae383
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- Article
Protein backbone angle prediction with machine learning approaches.
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- Bioinformatics, 2004, v. 20, n. 10, p. 1612, doi. 10.1093/bioinformatics/bth136
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- Article
HRB2 and BBX21 interaction modulates Arabidopsis ABI5 locus and stomatal aperture.
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- Plant, Cell & Environment, 2018, v. 41, n. 8, p. 1912, doi. 10.1111/pce.13336
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- Article
GNTD: reconstructing spatial transcriptomes with graph-guided neural tensor decomposition informed by spatial and functional relations.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-44017-0
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- Article
Predicting and exploring network components involved in pathogenesis in the malaria parasite via novel subnetwork alignments.
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- BMC Systems Biology, 2015, v. 9, p. 1, doi. 10.1186/1752-0509-9-S4-S1
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- Article
Module-based subnetwork alignments reveal novel transcriptional regulators in malaria parasite Plasmodium falciparum.
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- BMC Systems Biology, 2012, v. 6, n. Suppl 3, p. 1, doi. 10.1186/1752-0509-6-S3-S5
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- Article
Large-scale integrative network-based analysis identifies common pathways disrupted by copy number alterations across cancers.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-440
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- Article
Transcriptome profiling of resistant and susceptible Cavendish banana roots following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4.
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- BMC Genomics, 2012, v. 13, n. 1, p. 374, doi. 10.1186/1471-2164-13-374
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- Article
Hepcidin Protects Yellow Catfish (Pelteobagrus fulvidraco) against Aeromonas veronii -Induced Ascites Disease by Regulating Iron Metabolism.
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- Antibiotics (2079-6382), 2021, v. 10, n. 7, p. 848, doi. 10.3390/antibiotics10070848
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- Article
mRNA 3′-UTR shortening is a molecular signature of mTORC1 activation.
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- Nature Communications, 2015, v. 6, n. 6, p. 7218, doi. 10.1038/ncomms8218
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- Article
SubPatCNV: approximate subspace pattern mining for mapping copy-number variations.
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- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-014-0426-7
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- Article
SubPatCNV: approximate subspace pattern mining for mapping copy-number variations.
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- BMC Bioinformatics, 2015, v. 16, n. 1, p. 131, doi. 10.1186/s12859-014-0426-7
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- Article
A novel subnetwork alignment approach predicts new components of the cell cycle regulatory apparatus in Plasmodium falciparum.
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- BMC Bioinformatics, 2013, v. 14, n. Suppl 12, p. 1, doi. 10.1186/1471-2105-14-S12-S2
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- Article
DARPP-32 and t-DARPP promote non-small cell lung cancer growth through regulation of IKKα-dependent cell migration.
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- Communications Biology, 2018, v. 1, n. 1, p. N.PAG, doi. 10.1038/s42003-018-0050-6
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- Article
Global analysis of canola genes targeted by SHORT HYPOCOTYL UNDER BLUE 1 during endosperm and embryo development.
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- Plant Journal, 2017, v. 91, n. 1, p. 158, doi. 10.1111/tpj.13542
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- Article
Network-Based Isoform Quantification with RNA-Seq Data for Cancer Transcriptome Analysis.
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- PLoS Computational Biology, 2015, v. 11, n. 12, p. 1, doi. 10.1371/journal.pcbi.1004465
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- Article
PROFILE-BASED STRING KERNELS FOR REMOTE HOMOLOGY DETECTION AND MOTIF EXTRACTION.
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- Journal of Bioinformatics & Computational Biology, 2005, v. 3, n. 3, p. 527, doi. 10.1142/S021972000500120X
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- Article
Principles of Hatchet-Skin Flap for Repair of Tissue Defects on the Cheek.
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- Aesthetic Plastic Surgery, 2012, v. 36, n. 1, p. 163, doi. 10.1007/s00266-011-9759-z
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- Article
Vasodilator-stimulated phosphoprotein promotes liver metastasis of gastrointestinal cancer by activating a β1-integrin-FAK-YAP1/TAZ signaling pathway.
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- NPJ Precision Oncology, 2018, v. 2, n. 1, p. N.PAG, doi. 10.1038/s41698-017-0045-7
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- Article
Machine learning and statistical methods for clustering single-cell RNA-sequencing data.
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- Briefings in Bioinformatics, 2020, v. 21, n. 4, p. 1209, doi. 10.1093/bib/bbz063
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- Article
Platinum-sensitive recurrence in ovarian cancer: the role of tumor microenvironment.
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- Frontiers in Oncology, 2013, v. 3, p. 1, doi. 10.3389/fonc.2013.00251
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- Article
Path segmentation for movement trajectories with irregular sampling frequency using space‐time interpolation and density‐based spatial clustering.
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- Transactions in GIS, 2019, v. 23, n. 3, p. 558, doi. 10.1111/tgis.12549
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- Article
A large-scale comparative study of isoform expressions measured on four platforms.
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- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6643-8
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- Article
Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment.
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- PLoS Computational Biology, 2013, v. 9, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002975
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- Article
Improved prediction of malaria degradomes by supervised learning with SVM and profile kernel.
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- Genetica, 2009, v. 136, n. 1, p. 189, doi. 10.1007/s10709-008-9336-9
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- Article
Deciphering high-order structures in spatial transcriptomes with graph-guided Tucker decomposition.
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- Bioinformatics, 2024, v. 40, p. i529, doi. 10.1093/bioinformatics/btae245
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- Article
Detecting spatially co-expressed gene clusters with functional coherence by graph-regularized convolutional neural network.
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- Bioinformatics, 2022, v. 38, n. 5, p. 1344, doi. 10.1093/bioinformatics/btab812
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- Article
Platform-integrated mRNA isoform quantification.
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- Bioinformatics, 2020, v. 36, n. 8, p. 2466, doi. 10.1093/bioinformatics/btz932
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- Article
Fast String Kernels using Inexact Matching for Protein Sequences.
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- Journal of Machine Learning Research, 2004, v. 5, n. 9, p. 1435
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- Article
Applications of α, ω‐telechelic polydimethylsiloxane as cross‐linkers for preparing high‐temperature vulcanized silicone rubber.
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- Polymers for Advanced Technologies, 2019, v. 30, n. 4, p. 932, doi. 10.1002/pat.4527
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- Article
Comparative Phosphoproteomics Reveals an Important Role of MKK2 in Banana (Musa spp.) Cold Signal Network.
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- Scientific Reports, 2017, p. 40852, doi. 10.1038/srep40852
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- Article
Scalable remote homology detection and fold recognition in massive protein networks.
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- Proteins, 2019, v. 87, n. 6, p. 478, doi. 10.1002/prot.25669
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- Article
Phosphorus and Nitrogen Interactions in Field-Grown Soybean as Related to Genetic Attributes of Root Morphological and Nodular Traits.
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- Journal of Integrative Plant Biology, 2005, v. 47, n. 5, p. 549, doi. 10.1111/j.1744-7909.2005.00072.x
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- Article
GRANULARITY AND ANTIBACTERIAL ACTIVITIES OF ULTRA-FINE CINNAMON AND CLOVE POWDERS.
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- Journal of Food Safety, 2011, v. 31, n. 3, p. 291, doi. 10.1111/j.1745-4565.2011.00300.x
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- Article
Identifying remote protein homologs by network propagation.
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- FEBS Journal, 2005, v. 272, n. 20, p. 5119, doi. 10.1111/j.1742-4658.2005.04947.x
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- Article
Surveillance of endemic situation of schistosomiasis in Gaoyou sections in east route of South-to-North Water Diversion Project before water transfer.
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- Chinese Journal of Schistosomiasis Control, 2013, v. 25, n. 6, p. 644
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- Article
mTOR-regulated U2af1 tandem exon splicing specifies transcriptome features for translational control.
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- Nucleic Acids Research, 2019, v. 47, n. 19, p. 10373, doi. 10.1093/nar/gkz761
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- Article
An integrative model for alternative polyadenylation, IntMAP, delineates mTOR-modulated endoplasmic reticulum stress response.
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- Nucleic Acids Research, 2018, v. 46, n. 12, p. 5996, doi. 10.1093/nar/gky340
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- Article
TP53 mutations, tetraploidy and homologous recombination repair defects in early stage high-grade serous ovarian cancer.
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- Nucleic Acids Research, 2015, v. 43, n. 14, p. 6945, doi. 10.1093/nar/gkv111
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- Article
Co-clustering phenome–genome for phenotype classification and disease gene discovery.
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- Nucleic Acids Research, 2012, v. 40, n. 19, p. e146, doi. 10.1093/nar/gks615
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- Article
Synthesis of cysteamine-coated CdTe quantum dots for the detection of bisphenol A.
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- Microchimica Acta, 2010, v. 169, n. 1/2, p. 109, doi. 10.1007/s00604-010-0323-3
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- Article
Estimating KIR Haplotype Frequencies on a Cohort of 10,000 Individuals: A Comprehensive Study on Population Variations, Typing Resolutions, and Reference Haplotypes.
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- PLoS ONE, 2016, v. 11, n. 10, p. 1, doi. 10.1371/journal.pone.0163973
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- Article
Antiproliferative Evaluation of (E)-3-(3-(Allyloxy)-2-Methoxyphenyl)-1-(2,4,6-Trimethoxyphenyl)Prop-2-En-1-One as a Novel Apoptosis Inducer Against Prostate Cancer PC-3 Cells.
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- Pharmaceutical Chemistry Journal, 2019, v. 52, n. 11, p. 917, doi. 10.1007/s11094-019-01926-z
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- Article
Transfer learning across ontologies for phenome-genome association prediction.
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- Bioinformatics, 2017, v. 33, n. 4, p. 529, doi. 10.1093/bioinformatics/btw649
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- Article
Inferring disease and gene set associations with rank coherence in networks.
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- Bioinformatics, 2011, v. 27, n. 19, p. 2692, doi. 10.1093/bioinformatics/btr463
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- Article
Integrative classification and analysis of multiple arrayCGH datasets with probe alignment.
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- Bioinformatics, 2010, v. 26, n. 18, p. 2313, doi. 10.1093/bioinformatics/btq428
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- Article
A hypergraph-based learning algorithm for classifying gene expression and arrayCGH data with prior knowledge.
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- Bioinformatics, 2009, v. 25, n. 21, p. 2831, doi. 10.1093/bioinformatics/btp467
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- Article
Robust and efficient identification of biomarkers by classifying features on graphs.
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- Bioinformatics, 2008, v. 24, n. 18, p. 2023, doi. 10.1093/bioinformatics/btn383
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- Article
Motif-based protein ranking by network propagation.
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- Bioinformatics, 2005, v. 21, n. 19, p. 3711, doi. 10.1093/bioinformatics/bti608
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- Article