Works matching AU Kobashigawa, Yoshihiro

Results: 39

Noncanonical recognition and UBL loading of distinct E2s by autophagy-essential Atg7.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 12, p. 1250, doi. 10.1038/nsmb.2451

By:

Yamaguchi, Masaya;
Matoba, Kazuaki;
Sawada, Ryoko;
Fujioka, Yuko;
Nakatogawa, Hitoshi;
Yamamoto, Hayashi;
Kobashigawa, Yoshihiro;
Hoshida, Hisashi;
Akada, Rinji;
Ohsumi, Yoshinori;
Noda, Nobuo N;
Inagaki, Fuyuhiko

Publication type:

Article

Structural basis for the transforming activity of human cancer-related signaling adaptor protein CRK.

Published in:

Nature Structural & Molecular Biology, 2007, v. 14, n. 6, p. 503, doi. 10.1038/nsmb1241

By:

Kobashigawa, Yoshihiro;
Sakai, Mieko;
Naito, Masato;
Yokochi, Masashi;
Kumeta, Hiroyuki;
Makino, Yoshinori;
Ogura, Kenji;
Tanaka, Shinya;
Inagaki, Fuyuhiko

Publication type:

Article

Convenient method for resolving degeneracies due to symmetry of the magnetic susceptibility tensor and its application to pseudo contact shift-based protein-protein complex structure determination.

Published in:

Journal of Biomolecular NMR, 2012, v. 53, n. 1, p. 53, doi. 10.1007/s10858-012-9623-8

By:

Kobashigawa, Yoshihiro;
Saio, Tomohide;
Ushio, Masahiro;
Sekiguchi, Mitsuhiro;
Yokochi, Masashi;
Ogura, Kenji;
Inagaki, Fuyuhiko

Publication type:

Article

Two-point anchoring of a lanthanide-binding peptide to a target protein enhances the paramagnetic anisotropic effect.

Published in:

Journal of Biomolecular NMR, 2009, v. 44, n. 3, p. 157, doi. 10.1007/s10858-009-9325-z

By:

Saio, Tomohide;
Ogura, Kenji;
Yokochi, Masashi;
Kobashigawa, Yoshihiro;
Inagaki, Fuyuhiko

Publication type:

Article

The NMR structure of the TC10- and Cdc42-interacting domain of CIP4.

Published in:

Journal of Biomolecular NMR, 2009, v. 44, n. 2, p. 113, doi. 10.1007/s10858-009-9317-z

By:

Kobashigawa, Yoshihiro;
Kumeta, Hiroyuki;
Kanoh, Daisuke;
Inagaki, Fuyuhiko

Publication type:

Article

Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method.

Published in:

Journal of Biomolecular NMR, 2009, v. 43, n. 3, p. 145, doi. 10.1007/s10858-008-9296-5

By:

Kobashigawa, Yoshihiro;
Kumeta, Hiroyuki;
Ogura, Kenji;
Inagaki, Fuyuhiko

Publication type:

Article

Letter to the Editor: Assignments of 1H, 13C, and 15N resonances of human lysozyme at 4 °C.

Published in:

Journal of Biomolecular NMR, 2002, v. 22, n. 2, p. 183, doi. 10.1023/A:1014202921909

By:

Kumeta, Hiroyuki;
Kobashigawa, Yoshihiro;
Miura, Kazunori;
Nishimiya, Yoshiyuki;
Oka, Chitoshi;
Nemoto, Nobuaki;
Miura, Ai;
Nitta, Katsutoshi;
Tsuda, Sakae

Publication type:

Article

Letter to the Editor: Assignment of 1H, 13C, and 15N resonances of canine milk lysozyme.

Published in:

Journal of Biomolecular NMR, 2001, v. 19, n. 4, p. 387, doi. 10.1023/A:1011247208291

By:

Kobashigawa, Yoshihiro;
Miura, Kazunori;
Demura, Makoto;
Nemoto, Nobuaki;
Koshiba, Takumi;
Nitta, Katsutoshi;
Tsuda, Sakae

Publication type:

Article

Biophysical characterization of drug-resistant mutants of fibroblast growth factor receptor 1.

Published in:

Genes to Cells, 2016, v. 21, n. 10, p. 1049, doi. 10.1111/gtc.12405

By:

Yoza, Kaito;
Himeno, Rika;
Amano, Shinjiro;
Kobashigawa, Yoshihiro;
Amemiya, Shun;
Fukuda, Natsuki;
Kumeta, Hiroyuki;
Morioka, Hiroshi;
Inagaki, Fuyuhiko

Publication type:

Article

Nuclear magnetic resonance analysis of the conformational state of cancer mutant of fibroblast growth factor receptor 1 tyrosine kinase domain.

Published in:

Genes to Cells, 2016, v. 21, n. 4, p. 350, doi. 10.1111/gtc.12345

By:

Kobashigawa, Yoshihiro;
Amano, Shinjiro;
Yoza, Kaito;
Himeno, Rika;
Amemiya, Shun;
Morioka, Hiroshi;
Yokogawa, Mariko;
Kumeta, Hiroyuki;
Schlessinger, Joseph;
Inagaki, Fuyuhiko

Publication type:

Article

Structural analysis of the mechanism of phosphorylation of a critical autoregulatory tyrosine residue in FGFR1 kinase domain.

Published in:

Genes to Cells, 2015, v. 20, n. 10, p. 860, doi. 10.1111/gtc.12277

By:

Kobashigawa, Yoshihiro;
Amano, Shinjiro;
Yokogawa, Mariko;
Kumeta, Hiroyuki;
Morioka, Hiroshi;
Inouye, Masayori;
Schlessinger, Joseph;
Inagaki, Fuyuhiko

Publication type:

Article

Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.

Published in:

Genes to Cells, 2012, v. 17, n. 3, p. 159, doi. 10.1111/j.1365-2443.2012.01580.x

By:

Ogura, Kenji;
Kumeta, Hiroyuki;
Takahasi, Kiyohiro;
Kobashigawa, Yoshihiro;
Yoshida, Ryosuke;
Itoh, Hiroyuki;
Yazawa, Michio;
Inagaki, Fuyuhiko

Publication type:

Article

Distinct Roles for the N- and C-terminal Regions of M-Sec in Plasma Membrane Deformation during Tunneling Nanotube Formation.

Published in:

Scientific Reports, 2016, p. 33548, doi. 10.1038/srep33548

By:

Kimura, Shunsuke;
Yamashita, Masami;
Yamakami-Kimura, Megumi;
Sato, Yusuke;
Yamagata, Atsushi;
Kobashigawa, Yoshihiro;
Inagaki, Fuyuhiko;
Amada, Takako;
Hase, Koji;
Iwanaga, Toshihiko;
Ohno, Hiroshi;
Fukai, Shuya

Publication type:

Article

Ligand-driven conformational changes of MurD visualized by paramagnetic NMR.

Published in:

Scientific Reports, 2015, p. 16685, doi. 10.1038/srep16685

By:

Saio, Tomohide;
Ogura, Kenji;
Kumeta, Hiroyuki;
Kobashigawa, Yoshihiro;
Shimizu, Kazumi;
Yokochi, Masashi;
Inagaki, Fuyuhiko;
Kodama, Kota;
Yamaguchi, Hiroto;
Tsujishita, Hideki

Publication type:

Article

SIRT7 has a critical role in bone formation by regulating lysine acylation of SP7/Osterix.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-05187-4

By:

Masatoshi Fukuda;
Tatsuya Yoshizawa;
Karim, Md. Fazlul;
Sobuz, Shihab U.;
Wataru Korogi;
Daiki Kobayasi;
Hiroki Okanishi;
Masayoshi Tasaki;
Katsuhiko Ono;
Tomohiro Sawa;
Yoshifumi Sato;
Mami Chirifu;
Takeshi Masuda;
Teruya Nakamura;
Hironori Tanoue;
Kazuhisa Nakashima;
Yoshihiro Kobashigawa;
Hiroshi Morioka;
Bober, Eva;
Sumio Ohtsuki

Publication type:

Article

Evaluation of the cyclic single-chain Fv antibody derived from nivolumab by biophysical analyses and in vitro cell-based bioassay.

Published in:

Journal of Biochemistry, 2024, v. 176, n. 2, p. 131, doi. 10.1093/jb/mvae034

By:

Kamesawa, Sena;
Ogawa, Mizuki;
Funakoshi, Yoshiki;
Kato, Masaya;
Kai, Shosei;
Namikawa, Mana;
Okazaki, Kyo;
Sato, Takashi;
Kobashigawa, Yoshihiro;
Morioka, Hiroshi

Publication type:

Article

Structure-based design, biophysical characterization, and biochemical application of the heterodimeric affinity purification tag based on the Schistosoma japonicum glutathione-S-transferase (SjGST) homodimer.

Published in:

Journal of Biochemistry, 2024, v. 176, n. 1, p. 69, doi. 10.1093/jb/mvae028

By:

Du, Yan;
Kobashigawa, Yoshihiro;
Okazaki, Kyo;
Ogawa, Mizuki;
Kawaguchi, Tomoyuki;
Sato, Takashi;
Morioka, Hiroshi

Publication type:

Article

A part of ice nucleation protein exhibits the ice-binding ability

Published in:

FEBS Letters, 2005, v. 579, n. 6, p. 1493, doi. 10.1016/j.febslet.2005.01.056

By:

Kobashigawa, Yoshihiro;
Nishimiya, Yoshiyuki;
Miura, Kazunori;
Ohgiya, Satoru;
Miura, Ai;
Tsuda, Sakae

Publication type:

Article

Effects of a helix substitution on the folding mechanism of bovine α-lactalbumin.

Published in:

Proteins, 2002, v. 49, n. 1, p. 95, doi. 10.1002/prot.10185

By:

Mizuguchi, Mineyuki;
Kobashigawa, Yoshihiro;
Kumaki, Yasuhiro;
Demura, Makoto;
Kawano, Keiichi;
Nitta, Katsutoshi

Publication type:

Article

Hydrogen exchange study of canine milk lysozyme: Stabilization mechanism of the molten globule.

Published in:

Proteins, 2000, v. 40, n. 4, p. 579, doi. 10.1002/1097-0134(20000901)40:4<579::AID-PROT40>3.0.CO;2-1

By:

Kobashigawa, Yoshihiro;
Demura, Makoto;
Koshiba, Takumi;
Kumaki, Yasuhiro;
Kuwajima, Kunihiro;
Nitta, Katsutoshi

Publication type:

Article

高難度試料の解析へ向けたNMR試料調製技術.

Published in:

Seibutsu Butsuri, 2013, v. 53, n. 5, p. 268, doi. 10.2142/biophys.53.268

By:

Kobashigawa Yoshihiro;
Yokogawa Mariko;
Inagaki Fuyuhiko

Publication type:

Article

Author Correction: 1.2 MV/cm pulsed electric fields promote transthyretin aggregate degradation.

Published in:

2020

By:

Urabe, Gen;
Sato, Takashi;
Nakamura, Gomaru;
Kobashigawa, Yoshihiro;
Morioka, Hiroshi;
Katsuki, Sunao

Publication type:

Correction Notice

1.2 MV/cm pulsed electric fields promote transthyretin aggregate degradation.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-68681-0

By:

Urabe, Gen;
Sato, Takashi;
Nakamura, Gomaru;
Kobashigawa, Yoshihiro;
Morioka, Hiroshi;
Katsuki, Sunao

Publication type:

Article

Production and characterization of recombinant tachycitin, the Cys-rich chitin-binding protein.

Published in:

Protein Engineering, 2002, v. 15, n. 9, p. 763, doi. 10.1093/protein/15.9.763

By:

Suetake, Tetsuya;
Aizawa, Tomoyasu;
Koganesawa, Nozomi;
Osaki, Tsukasa;
Kobashigawa, Yoshihiro;
Demura, Makoto;
Kawabata, Shun-ichiro;
Kawano, Keiichi;
Tsuda, Sakae;
Nitta, Katsutoshi

Publication type:

Article

Energetics of three-state unfolding of a protein: canine milk lysozyme.

Published in:

Protein Engineering, 2001, v. 14, n. 12, p. 967, doi. 10.1093/protein/14.12.967

By:

Koshiba, Takumi;
Kobashigawa, Yoshihiro;
Demura, Makoto;
Nitta, Katsutoshi

Publication type:

Article

Hydrogen bonds connecting the N-terminal region and the DE loop stabilize the monomeric structure of transthyretin.

Published in:

Journal of Biochemistry, 2023, v. 174, n. 4, p. 355, doi. 10.1093/jb/mvad049

By:

Inada, Yuki;
Ono, Yuichiro;
Okazaki, Kyo;
Yamashita, Takuma;
Kawaguchi, Tomoyuki;
Kawano, Shingo;
Kobashigawa, Yoshihiro;
Shinya, Shoko;
Kojima, Chojiro;
Shuto, Tsuyoshi;
Kai, Hirofumi;
Morioka, Hiroshi;
Sato, Takashi

Publication type:

Article

Molecular recognition of a single-chain Fv antibody specific for GA-pyridine, an advanced glycation end-product (AGE), elucidated using biophysical techniques and synthetic antigen analogues.

Published in:

Journal of Biochemistry, 2021, v. 170, n. 3, p. 379, doi. 10.1093/jb/mvab056

By:

Kobashigawa, Yoshihiro;
Ohara, Toshiya;
Morita, Kosuke;
Toyota, Yuya;
Nakamura, Teruya;
Kotani, Shunsuke;
Arimori, Takao;
Yamauchi, Soichiro;
Liu, Chenjiang;
Kitazaki, Masaya;
Wakeyama-Miyazaki, Yukari;
Suwa, Yoshiaki;
Uchida-Kamekura, Makiyo;
Fukuda, Natsuki;
Sato, Takashi;
Nakajima, Makoto;
Takagi, Junichi;
Yamagata, Yuriko;
Morioka, Hiroshi

Publication type:

Article

Convenient method of producing cyclic single-chain Fv antibodies by split-intein-mediated protein ligation and chaperone co-expression.

Published in:

Journal of Biochemistry, 2020, v. 168, n. 3, p. 257, doi. 10.1093/jb/mvaa042

By:

Liu, Chenjiang;
Kobashigawa, Yoshihiro;
Yamauchi, Soichiro;
Fukuda, Natsuki;
Sato, Takashi;
Masuda, Takeshi;
Ohtsuki, Sumio;
Morioka, Hiroshi

Publication type:

Article

Preparation of single-chain Fv antibodies in the cytoplasm of Escherichia coli by simplified and systematic chaperone optimization.

Published in:

Journal of Biochemistry, 2019, v. 166, n. 6, p. 455, doi. 10.1093/jb/mvz059

By:

Liu, Chenjiang;
Kobashigawa, Yoshihiro;
Yamauchi, Soichiro;
Toyota, Yuya;
Teramoto, Manaka;
Ikeguchi, Yuka;
Fukuda, Natsuki;
Sato, Takashi;
Sato, Yuko;
Kimura, Hiroshi;
Morioka, Hiroshi

Publication type:

Article

Role of the mobility of antigen binding site in high affinity antibody elucidated by surface plasmon resonance.

Published in:

Journal of Biochemistry, 2017, v. 161, n. 1, p. 37, doi. 10.1093/jb/mvw050

By:

Natsuki Fukuda;
Yoshiaki Suwa;
Makiyo Uchida;
Yoshihiro Kobashigawa;
Hideshi Yokoyama;
Hiroshi Morioka

Publication type:

Article

NMR Structure of the Heterodimer of Bem1 and Cdc24 PB1 Domains from Saccharomyces Cerevisiae.

Published in:

Journal of Biochemistry, 2009, v. 146, n. 3, p. 317, doi. 10.1093/jb/mvp075

By:

Ogura, Kenji;
Tandai, Tsubasa;
Yoshinaga, Sosuke;
Kobashigawa, Yoshihiro;
Kumeta, Hiroyuki;
Ito, Takashi;
Sumimoto, Hideki;
Inagaki, Fuyuhiko

Publication type:

Article

Cyclization of Single-Chain Fv Antibodies Markedly Suppressed Their Characteristic Aggregation Mediated by Inter-Chain VH-VL Interactions.

Published in:

Molecules, 2019, v. 24, n. 14, p. 2620, doi. 10.3390/molecules24142620

By:

Yamauchi, Soichiro;
Kobashigawa, Yoshihiro;
Fukuda, Natsuki;
Teramoto, Manaka;
Toyota, Yuya;
Liu, Chenjiang;
Ikeguchi, Yuka;
Sato, Takashi;
Sato, Yuko;
Kimura, Hiroshi;
Masuda, Takeshi;
Ohtsuki, Sumio;
Noi, Kentaro;
Ogura, Teru;
Morioka, Hiroshi;
Hiroaki, Hidekazu;
Tomii, Kentaro

Publication type:

Article

A Cost-Effective Immobilization Method for MBP Fusion Proteins on Microtiter Plates Using a Gelatinized Starch–Agarose Mixture and Its Application for Convenient Protein–Protein Interaction Analysis.

Published in:

Methods & Protocols, 2023, v. 6, n. 3, p. 44, doi. 10.3390/mps6030044

By:

Emoto, Yuri;
Katayama, Ryoya;
Hibino, Emi;
Ishihara, Sho;
Goda, Natsuko;
Tenno, Takeshi;
Kobashigawa, Yoshihiro;
Morioka, Hiroshi;
Hiroaki, Hidekazu

Publication type:

Article

Practical applications of hydrostatic pressure to refold proteins from inclusion bodies for NMR structural studies.

Published in:

PEDS: Protein Engineering, Design & Selection, 2013, v. 26, n. 6, p. 409, doi. 10.1093/protein/gzt012

By:

Ogura, Kenji;
Kobashigawa, Yoshihiro;
Saio, Tomohide;
Kumeta, Hiroyuki;
Torikai, Shinnosuke;
Inagaki, Fuyuhiko

Publication type:

Article

A low-cost affinity purification system using β-1,3-glucan recognition protein and curdlan beads.

Published in:

PEDS: Protein Engineering, Design & Selection, 2012, v. 25, n. 8, p. 405, doi. 10.1093/protein/gzs028

By:

Horiuchi, Masataka;
Takahasi, Kiyohiro;
Kobashigawa, Yoshihiro;
Ochiai, Masanori;
Inagaki, Fuyuhiko

Publication type:

Article

An evaluation tool for FKBP12-dependent and -independent mTOR inhibitors using a combination of FKBP-mTOR fusion protein, DSC and NMR.

Published in:

PEDS: Protein Engineering, Design & Selection, 2011, v. 24, n. 11, p. 811, doi. 10.1093/protein/gzr045

By:

Sekiguchi, Mitsuhiro;
Kobashigawa, Yoshihiro;
Kawasaki, Masashi;
Yokochi, Masashi;
Kiso, Tetsuo;
Suzumura, Ken-ichi;
Mori, Keitaro;
Teramura, Toshio;
Inagaki, Fuyuhiko

Publication type:

Article

Structural biology: CrkL is not Crk-like.

Published in:

Nature Chemical Biology, 2012, v. 8, n. 6, p. 504, doi. 10.1038/nchembio.963

By:

Kobashigawa, Yoshihiro;
Inagaki, Fuyuhiko

Publication type:

Article

Production of Single-Chain Fv Antibodies Specific for GA-Pyridine, an Advanced Glycation End-Product (AGE), with Reduced Inter-Domain Motion.

Published in:

Molecules, 2017, v. 22, n. 10, p. 1695, doi. 10.3390/molecules22101695

By:

Natsuki Fukuda;
Kentaro Noi;
Lidong Weng;
Yoshihiro Kobashigawa;
Hiromi Miyazaki;
Yukari Wakeyama;
Michiyo Takaki;
Yusuke Nakahara;
Yuka Tatsuno;
Makiyo Uchida-Kamekura;
Yoshiaki Suwa;
Takashi Sato;
Naoki Ichikawa-Tomikawa;
Motoyoshi Nomizu;
Yukio Fujiwara;
Fumina Ohsaka;
Takashi Saito;
Katsumi Maenaka;
Hiroyuki Kumeta;
Shoko Shinya

Publication type:

Article

Effect of hydrostatic pressure on unfolding of α-lactalbumin: Volumetric equivalence of the molten globule and unfolded state.

Published in:

Protein Science: A Publication of the Protein Society, 1999, v. 8, n. 12, p. 2765, doi. 10.1110/ps.8.12.2765

By:

Kobashigawa, Yoshihiro;
Nitta, Katsutoshi;
Sakurai, Masao

Publication type:

Article