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MHC class I molecules exploit the low G+C content of pathogen genomes for enhanced presentation.
- Published in:
- European Journal of Immunology, 2010, v. 40, n. 10, p. 2699, doi. 10.1002/eji.201040339
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- Article
How does Cytopathicity Affect the Production of Neutralizing Antibody?
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- Scandinavian Journal of Immunology, 1998, v. 48, n. 4, p. 347, doi. 10.1046/j.1365-3083.1998.00425.x
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- Article
Identification of wheat varieties using matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry and an artificial neural network.
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- Rapid Communications in Mass Spectrometry: RCM, 1999, v. 13, n. 14, p. 1535, doi. 10.1002/(SICI)1097-0231(19990730)13:14<1535::AID-RCM686>3.0.CO;2-U
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- Article
Long-term adaptation of the influenza A virus by escaping cytotoxic T-cell recognition.
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- Scientific Reports, 2016, p. 33334, doi. 10.1038/srep33334
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- Publication type:
- Article
Comprehensive Analysis of the Naturally Processed Peptide Repertoire: Differences between HLA-A and B in the Immunopeptidome.
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- PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0136417
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- Publication type:
- Article
The Specificity and Polymorphism of the MHC Class I Prevents the Global Adaptation of HIV-1 to the Monomorphic Proteasome and TAP.
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- PLoS ONE, 2008, v. 3, n. 10, p. 1, doi. 10.1371/journal.pone.0003525
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- Article
Amino Acid Similarity Accounts for T Cell Cross-Reactivity and for "Holes" in the T Cell Repertoire.
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- PLoS ONE, 2008, v. 3, n. 3, p. 1, doi. 10.1371/journal.pone.0001831
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- Article
Clonal Exhaustion as a Result of Immune Deviation
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- Bulletin of Mathematical Biology, 2003, v. 65, n. 3, p. 359, doi. 10.1016/S0092-8240(03)00009-0
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- Article
Exploratory Study of Predicted Indirectly ReCognizable HLA Epitopes in Mismatched Hematopoietic Cell Transplantations.
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- Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00880
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- Article
Identification of a novel conserved signaling motif in CD200 receptor required for its inhibitory function.
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- PLoS ONE, 2021, v. 16, n. 3, p. 1, doi. 10.1371/journal.pone.0244770
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- Article
A Coevolutionary Arms Race between Hosts and Viruses Drives Polymorphism and Polygenicity of NK Cell Receptors.
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- Molecular Biology & Evolution, 2015, v. 32, n. 8, p. 2149, doi. 10.1093/molbev/msv096
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- Article
From image processing to classification: IV. Classification of electrophoretic patterns by neural networks and statistical methods enable quality assessment of wheat varieties for breadmaking.
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- Electrophoresis, 1996, v. 17, n. 4, p. 694, doi. 10.1002/elps.1150170412
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- Article
From image processing to classification: II. Classification of electrophoretic patterns using self-organizing feature maps and feed-forward neural networks.
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- Electrophoresis, 1995, v. 16, n. 1, p. 927, doi. 10.1002/elps.11501601156
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- Article
A novel bioinformatics pipeline for the identification of immune inhibitory receptors as potential therapeutic targets.
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- eLife, 2024, p. 1, doi. 10.7554/eLife.92870
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- Article
Properties of MHC Class I Presented Peptides That Enhance Immunogenicity.
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- PLoS Computational Biology, 2013, v. 9, n. 10, p. 1, doi. 10.1371/journal.pcbi.1003266
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- Article
Virus Encoded MHC-Like Decoys Diversify the Inhibitory KIR Repertoire.
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- PLoS Computational Biology, 2013, v. 9, n. 10, p. 1, doi. 10.1371/journal.pcbi.1003264
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- Article
Estimating the Fitness Cost of Escape from HLA Presentation in HIV-1 Protease and Reverse Transcriptase.
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- PLoS Computational Biology, 2012, v. 8, n. 5, p. 1, doi. 10.1371/journal.pcbi.1002525
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- Article
Proteome Sampling by the HLA Class I Antigen Processing Pathway.
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- PLoS Computational Biology, 2012, v. 8, n. 5, p. 1, doi. 10.1371/journal.pcbi.1002517
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- Article
Degenerate T-cell Recognition of Peptides on MHC Molecules Creates Large Holes in the T-cell Repertoire.
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- PLoS Computational Biology, 2012, v. 8, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002412
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- Article
Evolution of SARS-CoV-2-specific CD4<sup>+</sup> T cell epitopes.
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- Immunogenetics, 2023, v. 75, n. 3, p. 283, doi. 10.1007/s00251-023-01295-8
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- Article
Role of T cells in severe COVID-19 disease, protection, and long term immunity.
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- Immunogenetics, 2023, v. 75, n. 3, p. 295, doi. 10.1007/s00251-023-01294-9
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- Article
Immunogenetics special issue 2020: nomenclature, databases, and bioinformatics in immunogenetics.
- Published in:
- 2020
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- Publication type:
- Editorial
Revealing factors determining immunodominant responses against dominant epitopes.
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- Immunogenetics, 2020, v. 72, n. 1/2, p. 109, doi. 10.1007/s00251-019-01134-9
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- Article
Immune biomarkers for predicting response to adoptive cell transfer as cancer treatment.
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- Immunogenetics, 2019, v. 71, n. 2, p. 71, doi. 10.1007/s00251-018-1083-1
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- Article
Variety identification of wheat using mass spectrometry with neural networks and the influence of mass spectra processing prior to neural network analysis.
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- Rapid Communications in Mass Spectrometry: RCM, 2002, v. 16, n. 12, p. 1232, doi. 10.1002/rcm.709
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- Publication type:
- Article
Identification of barley and rye varieties using matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry with neural networks.
- Published in:
- Rapid Communications in Mass Spectrometry: RCM, 2001, v. 15, n. 6, p. 440, doi. 10.1002/rcm.248
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- Article
Editorial: Role of HLA and KIR in Viral Infections.
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- 2016
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- Publication type:
- Editorial
Evolutionary and immunological implications of contemporary HIV-1 variation.
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- British Medical Bulletin, 2001, v. 58, n. 1, p. 19, doi. 10.1093/bmb/58.1.19
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- Article
CD200R1L is a functional evolutionary conserved activating receptor in human neutrophils.
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- Journal of Leukocyte Biology, 2022, v. 111, n. 2, p. 367, doi. 10.1002/JLB.2A0520-334R
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- Article
Modelling the Human Immune System by Combining Bioinformatics and Systems Biology Approaches.
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- Journal of Biological Physics, 2006, v. 32, n. 3/4, p. 335, doi. 10.1007/s10867-006-9019-7
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- Article
Modeling the adaptive immune system: predictions and simulations.
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- Bioinformatics, 2007, v. 23, n. 24, p. 3265, doi. 10.1093/bioinformatics/btm471
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- Article
Is T Cell Negative Selection a Learning Algorithm?
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- Cells (2073-4409), 2020, v. 9, n. 3, p. 690, doi. 10.3390/cells9030690
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- Article
VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium.
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- Nucleic Acids Research, 2020, v. 48, n. D1, p. D1057, doi. 10.1093/nar/gkz874
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- Article
Specificity of inhibitory KIRs enables NK cells to detect changes in an altered peptide environment.
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- Immunogenetics, 2018, v. 70, n. 2, p. 87, doi. 10.1007/s00251-017-1019-1
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- Article
Zooming into the binding groove of HLA molecules: which positions and which substitutions change peptide binding most?
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- Immunogenetics, 2015, v. 67, n. 8, p. 425, doi. 10.1007/s00251-015-0849-y
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- Article
The evolution of natural killer cell receptors.
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- Immunogenetics, 2016, v. 68, n. 1, p. 3, doi. 10.1007/s00251-015-0869-7
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- Article
Role of peptide processing predictions in T cell epitope identification: contribution of different prediction programs.
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- Immunogenetics, 2015, v. 67, n. 2, p. 85, doi. 10.1007/s00251-014-0815-0
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- Article
HLA class I allele promiscuity revisited.
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- Immunogenetics, 2011, v. 63, n. 11, p. 691, doi. 10.1007/s00251-011-0552-6
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- Article
The role of the proteasome in generating cytotoxic T-cell epitopes: insights obtained from improved predictions of proteasomal cleavage.
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- Immunogenetics, 2005, v. 57, n. 1/2, p. 33, doi. 10.1007/s00251-005-0781-7
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- Article
Discriminating self from nonself with short peptides from large proteomes.
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- Immunogenetics, 2004, v. 56, n. 5, p. 311, doi. 10.1007/s00251-004-0691-0
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- Article
Definition of supertypes for HLA molecules using clustering of specificity matrices.
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- Immunogenetics, 2004, v. 55, n. 12, p. 797, doi. 10.1007/s00251-004-0647-4
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- Article
Heterozygote advantage fails to explain the high degree of polymorphism of the MHC.
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- Immunogenetics, 2004, v. 55, n. 11, p. 725, doi. 10.1007/s00251-003-0629-y
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- Article
Bioinformatic analysis of functional differences between the immunoproteasome and the constitutive proteasome.
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- Immunogenetics, 2003, v. 55, n. 7, p. 437, doi. 10.1007/s00251-003-0585-6
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- Article
Is the exquisite specificity of lymphocytes generated by thymic selection or due to evolution?
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- Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1266349
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- Article
HLA preferences for conserved epitopes: a potential mechanism for hepatitis C clearance.
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- Frontiers in Immunology, 2015, v. 6, p. 1, doi. 10.3389/fimmu.2015.00552
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- Article
Measles virus epitope presentation by HLA: novel insights into epitope selection, dominance, and microvariation.
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- Frontiers in Immunology, 2015, v. 6, p. 1, doi. 10.3389/fimmu.2015.00546
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- Article
Can selective MHC downregulation explain the specificity and genetic diversity of NK cell receptors?
- Published in:
- Frontiers in Immunology, 2015, p. 1, doi. 10.3389/fimmu.2015.00311
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- Article
Quantifying the protection of activating and inhibiting NK cell receptors during infection with a CMV-like virus.
- Published in:
- Frontiers in Immunology, 2014, v. 4, p. 1, doi. 10.3389/fimmu.2014.00020
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- Article
Complementarity of binding motifs is a general property of HLA-A and HLA-B molecules and does not seem to effect HLA haplotype composition.
- Published in:
- Frontiers in Immunology, 2013, v. 4, p. 1, doi. 10.3389/fimmu.2013.00374
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- Article