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The SWIB and the MDM2 domains are homologous and share a common fold.
- Published in:
- Bioinformatics, 2002, v. 18, n. 4, p. 626, doi. 10.1093/bioinformatics/18.4.626
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- Publication type:
- Article
Analysis of conservation and substitutions of secondary structure elements within protein superfamilies.
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- Bioinformatics, 2000, v. 16, n. 12, p. 1111, doi. 10.1093/bioinformatics/16.12.1111
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- Publication type:
- Article
Profiles of microRNA networks in intestinal epithelial cells in a mouse model of colitis.
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- Scientific Reports, 2015, p. 18174, doi. 10.1038/srep18174
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- Publication type:
- Article
Categorization of the Ocular Microbiome in Japanese Stevens–Johnson Syndrome Patients With Severe Ocular Complications.
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- Frontiers in Cellular & Infection Microbiology, 2021, v. 11, p. 1, doi. 10.3389/fcimb.2021.741654
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- Publication type:
- Article
Cover Picture: Data Curation can Improve the Prediction Accuracy of Metabolic Intrinsic Clearance (Mol. Inf. 1‐2/2019).
- Published in:
- Molecular Informatics, 2019, v. 38, n. 1/2, p. N.PAG, doi. 10.1002/minf.201980101
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- Publication type:
- Article
Data Curation can Improve the Prediction Accuracy of Metabolic Intrinsic Clearance.
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- Molecular Informatics, 2019, v. 38, n. 1/2, p. N.PAG, doi. 10.1002/minf.201800086
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- Publication type:
- Article
Gut microbiota modification suppresses the development of pulmonary arterial hypertension in an SU5416/hypoxia rat model.
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- Pulmonary Circulation, 2020, v. 10, n. 3, p. 1, doi. 10.1177/2045894020929147
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- Article
Dietary Vitamin B1 Intake Influences Gut Microbial Community and the Consequent Production of Short-Chain Fatty Acids.
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- Nutrients, 2022, v. 14, n. 10, p. 2078, doi. 10.3390/nu14102078
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- Publication type:
- Article
Effects of Malted Rice Amazake on Constipation Symptoms and Gut Microbiota in Children and Adults with Severe Motor and Intellectual Disabilities: A Pilot Study.
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- Nutrients, 2021, v. 13, n. 12, p. 4466, doi. 10.3390/nu13124466
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- Publication type:
- Article
Crystal structure of FtsA from Staphylococcus aureus.
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- FEBS Letters, 2014, v. 588, n. 10, p. 1879, doi. 10.1016/j.febslet.2014.04.008
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- Publication type:
- Article
Detecting subtle functional differences in ketopantoate reductase and related enzymes using a rule-based approach with sequence-structure homology recognition scores.
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- PEDS: Protein Engineering, Design & Selection, 2010, v. 23, n. 11, p. 859, doi. 10.1093/protein/gzq062
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- Publication type:
- Article
Docking of cytochrome c6 and plastocyanin to the aa3-type cytochrome c oxidase in the cyanobacterium Phormidium laminosum.
- Published in:
- PEDS: Protein Engineering, Design & Selection, 2008, v. 21, n. 12, p. 689, doi. 10.1093/protein/gzn051
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- Publication type:
- Article
Prediction of mono- and di-nucleotide-specific DNA-binding sites in proteins using neural networks.
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- BMC Structural Biology, 2009, v. 9, p. 1, doi. 10.1186/1472-6807-9-30
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- Publication type:
- Article
Comprehensive analysis of gut microbiota of a healthy population and covariates affecting microbial variation in two large Japanese cohorts.
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- BMC Microbiology, 2021, v. 21, n. 1, p. 1, doi. 10.1186/s12866-021-02215-0
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- Publication type:
- Article
Structural dynamics of the N‐terminal SH2 domain of PI3K in its free and CD28‐bound states.
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- FEBS Journal, 2023, v. 290, n. 9, p. 2366, doi. 10.1111/febs.16666
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- Publication type:
- Article
A-kinase anchoring protein BIG3 coordinates oestrogen signalling in breast cancer cells.
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- Nature Communications, 2017, v. 8, n. 5, p. 15427, doi. 10.1038/ncomms15427
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- Publication type:
- Article
Blockade of TLR3 protects mice from lethal radiation-induced gastrointestinal syndrome.
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- Nature Communications, 2014, v. 5, n. 3, p. 3492, doi. 10.1038/ncomms4492
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- Publication type:
- Article
Targeting BIG3-PHB2 interaction to overcome tamoxifen resistance in breast cancer cells.
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- Nature Communications, 2013, v. 4, n. 9, p. 2443, doi. 10.1038/ncomms3443
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- Publication type:
- Article
Distinct Age-Specific miRegulome Profiling of Isolated Small and Large Intestinal Epithelial Cells in Mice.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 7, p. 3544, doi. 10.3390/ijms22073544
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- Publication type:
- Article
Homology-based prediction of interactions between proteins using Averaged One-Dependence Estimators.
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- BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-213
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- Publication type:
- Article
Prediction of dinucleotide-specific RNA-binding sites in proteins.
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- BMC Bioinformatics, 2011, v. 12, n. Suppl 13, p. 1, doi. 10.1186/1471-2105-12-S13-S5
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- Publication type:
- Article
Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical membraneproteins.
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- BMC Bioinformatics, 2010, v. 11, p. 533, doi. 10.1186/1471-2105-11-533
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- Publication type:
- Article
Improved pose and affinity predictions using different protocols tailored on the basis of data availability.
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- Journal of Computer-Aided Molecular Design, 2016, v. 30, n. 9, p. 817, doi. 10.1007/s10822-016-9982-4
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- Publication type:
- Article
Gut microbial composition in patients with atrial fibrillation: effects of diet and drugs.
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- Heart & Vessels, 2021, v. 36, n. 1, p. 105, doi. 10.1007/s00380-020-01669-y
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- Article
Metabolomic analysis of fibrotic mice combined with public RNA‐Seq human lung data reveal potential diagnostic biomarker candidates for lung fibrosis.
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- FEBS Open Bio, 2020, v. 10, n. 11, p. 2427, doi. 10.1002/2211-5463.12982
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- Article
Identification of Human Gut Microbiome Associated with Enterolignan Production.
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- Micromachines, 2022, v. 13, n. 11, p. 2169, doi. 10.3390/microorganisms10112169
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- Article
An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework.
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- Database: The Journal of Biological Databases & Curation, 2016, v. 2016, p. 1, doi. 10.1093/database/baw009
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- Publication type:
- Article
The diversity of H3 loops determines the antigen-binding tendencies of antibody CDR loops.
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- Protein Science: A Publication of the Protein Society, 2016, v. 25, n. 4, p. 815, doi. 10.1002/pro.2874
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- Publication type:
- Article
Distinct protein interfaces in transmembrane domains suggest an in vivo folding model.
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- Protein Science: A Publication of the Protein Society, 2004, v. 13, n. 11, p. 3028, doi. 10.1110/ps.04723704
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- Article
HOMSTRAD: A database of protein structure alignments for homologous families.
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- 1998
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- Publication type:
- Other
Relationships between barley consumption and gut microbiome characteristics in a healthy Japanese population: a cross-sectional study.
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- BMC Nutrition, 2022, v. 8, n. 1, p. 1, doi. 10.1186/s40795-022-00500-3
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- Article
Integrative Analysis Reveals Common and Unique Roles of Tetraspanins in Fibrosis and Emphysema.
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- Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.585998
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- Article
Altered Actions of Memantine and NMDA-Induced Currents in a New Grid2-Deleted Mouse Line.
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- Genes, 2014, v. 5, n. 4, p. 1095, doi. 10.3390/genes5041095
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- Article
Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
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- Protein Engineering, 1996, v. 9, n. 12, p. 1083, doi. 10.1093/protein/9.12.1083
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- Article
Amino-Acid Substitutions In Membrane Proteins: Applications To Homology Recognition And Comparative Modelling.
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- 2005
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- Publication type:
- Conference Paper
TargetMine 2022: a new vision into drug target analysis.
- Published in:
- Bioinformatics, 2022, v. 38, n. 18, p. 4454, doi. 10.1093/bioinformatics/btac507
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- Publication type:
- Article
Development of an in silico prediction system of human renal excretion and clearance from chemical structure information incorporating fraction unbound in plasma as a descriptor.
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- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-55325-1
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- Publication type:
- Article
Actin Cytoskeletal Reorganization Function of JRAB/MICAL-L2 Is Fine-tuned by Intramolecular Interaction between First LIM Zinc Finger and C-terminal Coiled-coil Domains.
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- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-49232-8
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- Publication type:
- Article
B cell‐intrinsic MyD88 signaling controls IFN‐γ‐mediated early IgG2c class switching in mice in response to a particulate adjuvant.
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- European Journal of Immunology, 2019, v. 49, n. 9, p. 1433, doi. 10.1002/eji.201848084
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- Publication type:
- Article
Integrated Pathway Clusters with Coherent Biological Themes for Target Prioritisation.
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- PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099030
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- Publication type:
- Article
Prediction of Detailed Enzyme Functions and Identification of Specificity Determining Residues by Random Forests.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0084623
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- Publication type:
- Article
The Chemotherapeutic Agent DMXAA as a Unique IRF3-Dependent Type-2 Vaccine Adjuvant.
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- PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0060038
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- Publication type:
- Article
Partner-Aware Prediction of Interacting Residues in Protein-Protein Complexes from Sequence Data.
- Published in:
- PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0029104
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- Publication type:
- Article
TargetMine, an Integrated Data Warehouse for Candidate Gene Prioritisation and Target Discovery.
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- PLoS ONE, 2011, v. 6, n. 3, p. 1, doi. 10.1371/journal.pone.0017844
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- Publication type:
- Article
Drosophila Neurotrophins Reveal a Common Mechanism for Nervous System Formation.
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- PLoS Biology, 2008, v. 6, n. 11, p. e284, doi. 10.1371/journal.pbio.0060284
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- Publication type:
- Article
Organic Anion Transporting Polypeptides of the OATP/ SLCO Superfamily: Identification of New Members in Nonmammalian Species, Comparative Modeling and a Potential Transport Mode.
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- Journal of Membrane Biology, 2006, v. 208, n. 3, p. 213, doi. 10.1007/s00232-005-7004-x
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- Publication type:
- Article
Ramen Consumption and Gut Microbiota Diversity in Japanese Women: Cross-Sectional Data from the NEXIS Cohort Study.
- Published in:
- Microorganisms, 2023, v. 11, n. 8, p. 1892, doi. 10.3390/microorganisms11081892
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- Publication type:
- Article
Characteristic Gut Bacteria in High Barley Consuming Japanese Individuals without Hypertension.
- Published in:
- Microorganisms, 2023, v. 11, n. 5, p. 1246, doi. 10.3390/microorganisms11051246
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- Publication type:
- Article
Identification of Human Gut Microbiome Associated with Enterolignan Production.
- Published in:
- Microorganisms, 2022, v. 10, n. 11, p. 2169, doi. 10.3390/microorganisms10112169
- By:
- Publication type:
- Article
MANTA, an integrative database and analysis platform that relates microbiome and phenotypic data.
- Published in:
- PLoS ONE, 2020, v. 15, n. 12, p. 1, doi. 10.1371/journal.pone.0243609
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- Publication type:
- Article