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CLIMB: High-dimensional association detection in large scale genomic data.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34360-z
By:
- Koch, Hillary;
- Keller, Cheryl A.;
- Xiang, Guanjue;
- Giardine, Belinda;
- Zhang, Feipeng;
- Wang, Yicheng;
- Hardison, Ross C.;
- Li, Qunhua
Publication type:
Article
Field anesthesia machine ventilator oxygen consumption in models of high and low pulmonary compliance.
Published in:
2014
By:
- Szpisjak, Dale F;
- Starrett-Keller, Cheryl M
Publication type:
journal article
The γ2 Subunit of GABAA Receptors Is a Substrate for Palmitoylation by GODZ.
Published in:
Journal of Neuroscience, 2004, v. 24, n. 26, p. 5881, doi. 10.1523/JNEUROSCI.1037-04.2004
By:
- Keller, Cheryl A.;
- Xu Yuan;
- Panzanelli, Patrizia;
- Martin, Michelle L.;
- Alldred, Melissa;
- Sassoé-Pognetto, Marco;
- Lüscher, Bernhard
Publication type:
Article
SBR-Blood: systems biology repository for hematopoietic cells.
Published in:
Nucleic Acids Research, 2016, v. 44, n. 1, p. D925, doi. 10.1093/nar/gkv1263
By:
- Lichtenberg, Jens;
- Heuston, Elisabeth F.;
- Mishra, Tejaswini;
- Keller, Cheryl A.;
- Hardison, Ross C.;
- Bodine, David M.
Publication type:
Article
CTCF and transcription influence chromatin structure re-configuration after mitosis.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25418-5
By:
- Zhang, Haoyue;
- Lam, Jessica;
- Zhang, Di;
- Lan, Yemin;
- Vermunt, Marit W.;
- Keller, Cheryl A.;
- Giardine, Belinda;
- Hardison, Ross C.;
- Blobel, Gerd A.
Publication type:
Article
GODZ-Mediated Palmitoylation of GABAA Receptors Is Required for Normal Assembly and Function of GABAergic Inhibitory Synapses.
Published in:
Journal of Neuroscience, 2006, v. 26, n. 49, p. 12758, doi. 10.1523/JNEUROSCI.4214-06.2006
By:
- Cheng Fang;
- Deng, Lunbin;
- Keller, Cheryl A.;
- Fukata, Masaki;
- Fukata, Yuko;
- Gong Chen;
- Lüscher, Bernhard
Publication type:
Article
Ubiquitination, proteasomes and GABAA receptors.
Published in:
Nature Cell Biology, 2001, v. 3, n. 10, p. E232
By:
- Lüscher, Bernhard;
- Keller, Cheryl A.
Publication type:
Article
Effects of sheared chromatin length on ChIP-seq quality and sensitivity.
Published in:
G3: Genes | Genomes | Genetics, 2021, v. 11, n. 6, p. 1, doi. 10.1093/g3journal/jkab101
By:
- Keller, Cheryl A.;
- Wixom, Alexander Q.;
- Heuston, Elisabeth F.;
- Giardine, Belinda;
- Hsiung, Chris C.-S.;
- Long, Maria R.;
- Miller, Amber;
- Anderson, Stacie M.;
- Cockburn, April;
- Blobel, Gerd A.;
- Bodine, David M.;
- Hardison, Ross C.
Publication type:
Article
Occupancy by key transcription factors is a more accurate predictor of enhancer activity than histone modifications or chromatin accessibility.
Published in:
Epigenetics & Chromatin, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13072-015-0009-5
By:
- Dogan, Nergiz;
- Weisheng Wu;
- Morrissey, Christapher S.;
- Kuan-Bei Chen;
- Stonestrom, Aaron;
- Long, Maria;
- Keller, Cheryl A.;
- Yong Cheng;
- Jain, Deepti;
- Visel, Axel;
- Pennacchio, Len A.;
- Weiss, Mitchell J.;
- Blobel, Gerd A.;
- Hardison, Ross C.
Publication type:
Article
Systematic Integration of Epigenomic Landscapes in Human and Mouse Blood Cells to Predict Activity and Targets of Regulatory Elements.
Published in:
FASEB Journal, 2022, v. 36, p. N.PAG, doi. 10.1096/fasebj.2022.36.S1.R5637
By:
- Hardison, Ross C.;
- Xiang, Guanjue;
- Jansen, Camden;
- Keller, Cheryl A.;
- Giardine, Belinda M.;
- Cockburn, April;
- He, Xi;
- Sauria, Michael E.;
- Weaver, Kathryn;
- Li, Qunhua;
- Zhang, Yu
Publication type:
Article
Dynamic shifts in transcription factor occupancy drive reprogramming of gene expression during hematopoietic differentiation (LB181).
Published in:
FASEB Journal, 2014, v. 28, p. N.PAG, doi. 10.1096/fasebj.28.1_supplement.lb181
By:
- Hardison, Ross;
- Wu, Weisheng;
- Morrissey, Christapher;
- Keller, Cheryl;
- Mishra, Tejaswini;
- Pimkin, Maxim;
- Blobel, Gerd;
- Weiss, Mitchell;
- Bodine, David
Publication type:
Article
Principles of regulatory information conservation between mouse and human.
Published in:
Nature, 2014, v. 515, n. 7527, p. 371, doi. 10.1038/nature13985
By:
- Cheng, Yong;
- Ma, Zhihai;
- Cayting, Philip;
- Boyle, Alan P.;
- Li, Jingjing;
- Euskirchen, Ghia;
- Kawli, Trupti;
- Yang, Xinqiong;
- Patacsil, Dorrelyn;
- The Mouse ENCODE Consortium;
- Kundaje, Anshul;
- Snyder, Michael P.;
- Kim, Bong-Hyun;
- Weng, Zhiping;
- Wu, Weisheng;
- Sundaram, Vasavi;
- Xing, Xiaoyun;
- Wang, Ting;
- Dogan, Nergiz;
- Keller, Cheryl A.
Publication type:
Article
Exploiting genetic variation to uncover rules of transcription factor binding and chromatin accessibility.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-03082-6
By:
- Behera, Vivek;
- Evans, Perry;
- Face, Carolyne J.;
- Hamagami, Nicole;
- Sankaranarayanan, Laavanya;
- Keller, Cheryl A.;
- Giardine, Belinda;
- Kai Tan;
- Hardison, Ross C.;
- Junwei Shi;
- Blobel, Gerd A.
Publication type:
Article
Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of hematopoietic cells.
Published in:
IUBMB Life, 2020, v. 72, n. 1, p. 27, doi. 10.1002/iub.2195
By:
- Hardison, Ross C.;
- Zhang, Yu;
- Keller, Cheryl A.;
- Xiang, Guanjue;
- Heuston, Elisabeth F.;
- An, Lin;
- Lichtenberg, Jens;
- Giardine, Belinda M.;
- Bodine, David;
- Mahony, Shaun;
- Li, Qunhua;
- Yue, Feng;
- Weiss, Mitchell J.;
- Blobel, Gerd A.;
- Taylor, James;
- Hughes, Jim;
- Higgs, Douglas R.;
- Göttgens, Berthold
Publication type:
Article
Establishment of regulatory elements during erythro-megakaryopoiesis identifies hematopoietic lineage-commitment points.
Published in:
Epigenetics & Chromatin, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13072-018-0195-z
By:
- Heuston, Elisabeth F.;
- Keller, Cheryl A.;
- Lichtenberg, Jens;
- Giardine, Belinda;
- Anderson, Stacie M.;
- NIH Intramural Sequencing Center;
- Hardison, Ross C.;
- Bodine, David M.
Publication type:
Article
Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation.
Published in:
BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-023-05223-1
By:
- Xiang, Guanjue;
- Giardine, Belinda;
- An, Lin;
- Sun, Chen;
- Keller, Cheryl A.;
- Heuston, Elisabeth F.;
- Anderson, Stacie M.;
- Kirby, Martha;
- Bodine, David;
- Zhang, Yu;
- Hardison, Ross C.
Publication type:
Article

Found: 16

CLIMB: High-dimensional association detection in large scale genomic data.

Field anesthesia machine ventilator oxygen consumption in models of high and low pulmonary compliance.

The γ2 Subunit of GABA<sub>A</sub> Receptors Is a Substrate for Palmitoylation by GODZ.

SBR-Blood: systems biology repository for hematopoietic cells.

CTCF and transcription influence chromatin structure re-configuration after mitosis.

GODZ-Mediated Palmitoylation of GABA<sub>A</sub> Receptors Is Required for Normal Assembly and Function of GABAergic Inhibitory Synapses.

Ubiquitination, proteasomes and GABA<sub>A</sub> receptors.

Effects of sheared chromatin length on ChIP-seq quality and sensitivity.

Occupancy by key transcription factors is a more accurate predictor of enhancer activity than histone modifications or chromatin accessibility.

Systematic Integration of Epigenomic Landscapes in Human and Mouse Blood Cells to Predict Activity and Targets of Regulatory Elements.

Dynamic shifts in transcription factor occupancy drive reprogramming of gene expression during hematopoietic differentiation (LB181).

Principles of regulatory information conservation between mouse and human.

Exploiting genetic variation to uncover rules of transcription factor binding and chromatin accessibility.

Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of hematopoietic cells.

Establishment of regulatory elements during erythro-megakaryopoiesis identifies hematopoietic lineage-commitment points.

Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation.