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Accurate isoform discovery with IsoQuant using long reads.
Published in:
Nature Biotechnology, 2023, v. 41, n. 7, p. 915, doi. 10.1038/s41587-022-01565-y
By:
- Prjibelski, Andrey D.;
- Mikheenko, Alla;
- Joglekar, Anoushka;
- Smetanin, Alexander;
- Jarroux, Julien;
- Lapidus, Alla L.;
- Tilgner, Hagen U.
Publication type:
Article
Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue.
Published in:
Nature Biotechnology, 2022, v. 40, n. 7, p. 1082, doi. 10.1038/s41587-022-01231-3
By:
- Hardwick, Simon A.;
- Hu, Wen;
- Joglekar, Anoushka;
- Fan, Li;
- Collier, Paul G.;
- Foord, Careen;
- Balacco, Jennifer;
- Lanjewar, Samantha;
- Sampson, Maureen McGuirk;
- Koopmans, Frank;
- Prjibelski, Andrey D.;
- Mikheenko, Alla;
- Belchikov, Natan;
- Jarroux, Julien;
- Lucas, Anne Bergstrom;
- Palkovits, Miklós;
- Luo, Wenjie;
- Milner, Teresa A.;
- Ndhlovu, Lishomwa C.;
- Smit, August B.
Publication type:
Article
Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells.
Published in:
Nature Biotechnology, 2018, v. 36, n. 12, p. 1197, doi. 10.1038/nbt.4259
By:
- Gupta, Ishaan;
- Collier, Paul G;
- Haase, Bettina;
- Mahfouz, Ahmed;
- Joglekar, Anoushka;
- Floyd, Taylor;
- Koopmans, Frank;
- Barres, Ben;
- Smit, August B;
- Sloan, Steven A;
- Luo, Wenjie;
- Fedrigo, Olivier;
- Ross, M Elizabeth;
- Tilgner, Hagen U
Publication type:
Article
ScisorWiz: visualizing differential isoform expression in single-cell long-read data.
Published in:
Bioinformatics, 2022, v. 38, n. 13, p. 3474, doi. 10.1093/bioinformatics/btac340
By:
- Stein, Alexander N;
- Joglekar, Anoushka;
- Poon, Chi-Lam;
- Tilgner, Hagen U
Publication type:
Article
Getting the Entire Message: Progress in Isoform Sequencing.
Published in:
Frontiers in Genetics, 2019, p. 1, doi. 10.3389/fgene.2019.00709
By:
- Hardwick, Simon A.;
- Joglekar, Anoushka;
- Flicek, Paul;
- Frankish, Adam;
- Tilgner, Hagen U.
Publication type:
Article
A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-020-20343-5
By:
- Joglekar, Anoushka;
- Prjibelski, Andrey;
- Mahfouz, Ahmed;
- Collier, Paul;
- Lin, Susan;
- Schlusche, Anna Katharina;
- Marrocco, Jordan;
- Williams, Stephen R.;
- Haase, Bettina;
- Hayes, Ashley;
- Chew, Jennifer G.;
- Weisenfeld, Neil I.;
- Wong, Man Ying;
- Stein, Alexander N.;
- Hardwick, Simon A.;
- Hunt, Toby;
- Wang, Qi;
- Dieterich, Christoph;
- Bent, Zachary;
- Fedrigo, Olivier
Publication type:
Article

Found: 6

Accurate isoform discovery with IsoQuant using long reads.

Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue.

Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells.

ScisorWiz: visualizing differential isoform expression in single-cell long-read data.

Getting the Entire Message: Progress in Isoform Sequencing.

A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain.