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Visualization of genetic disease-phenotype similarities by multiple maps t-SNE with Laplacian regularization.
- Published in:
- BMC Medical Genomics, 2014, v. 7, p. 1, doi. 10.1186/1755-8794-7-S2-S1
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- Publication type:
- Article
Multi‐network logistic matrix factorization for metabolite–disease interaction prediction.
- Published in:
- FEBS Letters, 2020, v. 594, n. 11, p. 1675, doi. 10.1002/1873-3468.13782
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- Publication type:
- Article
sOCP: a framework predicting smORF coding potential based on TIS and in-frame features and effectively applied in the human genome.
- Published in:
- Briefings in Bioinformatics, 2024, v. 25, n. 3, p. 1, doi. 10.1093/bib/bbae147
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- Publication type:
- Article
Improving drug–drug interactions prediction with interpretability via meta-path-based information fusion.
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- Briefings in Bioinformatics, 2023, v. 24, n. 2, p. 1, doi. 10.1093/bib/bbad041
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- Publication type:
- Article
multiMiAT: an optimal microbiome-based association test for multicategory phenotypes.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 2, p. 1, doi. 10.1093/bib/bbad012
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- Publication type:
- Article
Detecting sparse microbial association signals adaptively from longitudinal microbiome data based on generalized estimating equations.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 5, p. 1, doi. 10.1093/bib/bbac149
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- Publication type:
- Article
multi-label learning framework for predicting antibiotic resistance genes via dual-view modeling.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 3, p. 1, doi. 10.1093/bib/bbac052
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- Publication type:
- Article
Sequence clustering in bioinformatics: an empirical study.
- Published in:
- Briefings in Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1093/bib/bby090
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- Publication type:
- Article
Exposure to Formaldehyde Perturbs the Mouse Gut Microbiome.
- Published in:
- Genes, 2018, v. 9, n. 4, p. 192, doi. 10.3390/genes9040192
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- Publication type:
- Article
Recognition of bacteria named entity using conditional random fields in Spark.
- Published in:
- BMC Systems Biology, 2018, v. 12, n. 6, p. N.PAG, doi. 10.1186/s12918-018-0625-3
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- Publication type:
- Article
Metformin prevents brain injury after cardiopulmonary resuscitation by inhibiting the endoplasmic reticulum stress response and activating AMPK-mediated autophagy.
- Published in:
- Scottish Medical Journal, 2021, v. 66, n. 1, p. 16, doi. 10.1177/0036933020961543
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- Publication type:
- Article
Causal-ARG: a causality-guided framework for annotating properties of antibiotic resistance genes.
- Published in:
- Bioinformatics, 2024, v. 40, n. 4, p. 1, doi. 10.1093/bioinformatics/btae180
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- Publication type:
- Article
Efficient multiple biomedical events extraction via reinforcement learning.
- Published in:
- Bioinformatics, 2021, v. 37, n. 13, p. 1891, doi. 10.1093/bioinformatics/btab024
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- Publication type:
- Article
Environment dependent microbial co‐occurrences across a cyanobacterial bloom in a freshwater lake.
- Published in:
- Environmental Microbiology, 2021, v. 23, n. 1, p. 327, doi. 10.1111/1462-2920.15315
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- Publication type:
- Article
Functional Biogeography of Ocean Microbes Revealed through Non-Negative Matrix Factorization.
- Published in:
- PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0043866
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- Publication type:
- Article
A Systems Biology-Based Gene Expression Classifier of Glioblastoma Predicts Survival with Solid Tumors.
- Published in:
- PLoS ONE, 2009, v. 4, n. 7, p. 1, doi. 10.1371/journal.pone.0006274
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- Publication type:
- Article
Discovering communities in complex networks by edge label propagation.
- Published in:
- Scientific Reports, 2016, p. 22470, doi. 10.1038/srep22470
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- Publication type:
- Article
An effective framework for semistructured document classification via hierarchical attention model.
- Published in:
- International Journal of Intelligent Systems, 2021, v. 36, n. 9, p. 5161, doi. 10.1002/int.22508
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- Publication type:
- Article
MiRNA-disease interaction prediction based on kernel neighborhood similarity and multi-network bidirectional propagation.
- Published in:
- BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0622-4
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- Publication type:
- Article
An adaptive term proximity based rocchio's model for clinical decision support retrieval.
- Published in:
- 2019
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- Publication type:
- journal article
Nonlinear expression and visualization of nonmetric relationships in genetic diseases and microbiome data.
- Published in:
- BMC Bioinformatics, 2018, v. 19, n. 18, p. 37, doi. 10.1186/s12859-018-2537-z
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- Publication type:
- Article
Inferring microbial interaction networks based on consensus similarity network fusion.
- Published in:
- SCIENCE CHINA Life Sciences, 2014, v. 57, n. 11, p. 1115, doi. 10.1007/s11427-014-4735-x
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- Publication type:
- Article
Identifying protein complex by integrating characteristic of core-attachment into dynamic PPI network.
- Published in:
- PLoS ONE, 2017, v. 12, n. 10, p. 1, doi. 10.1371/journal.pone.0186134
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- Publication type:
- Article
A non-negative matrix factorization framework for identifying modular patterns in metagenomic profile data.
- Published in:
- Journal of Mathematical Biology, 2012, v. 64, n. 4, p. 697, doi. 10.1007/s00285-011-0428-2
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- Publication type:
- Article
Corrigendum: Graph Embedding Deep Learning Guides Microbial Biomarkers' Identification.
- Published in:
- 2020
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- Publication type:
- Correction Notice
Graph Embedding Deep Learning Guides Microbial Biomarkers' Identification.
- Published in:
- Frontiers in Genetics, 2019, v. 10, p. 1, doi. 10.3389/fgene.2019.01182
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- Publication type:
- Article
Projection-Based Neighborhood Non-Negative Matrix Factorization for lncRNA-Protein Interaction Prediction.
- Published in:
- Frontiers in Genetics, 2019, v. 10, p. 1, doi. 10.3389/fgene.2019.01148
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- Publication type:
- Article
Predicting virus-host association by Kernelized logistic matrix factorization and similarity network fusion.
- Published in:
- BMC Bioinformatics, 2019, v. 20, p. 1, doi. 10.1186/s12859-019-3082-0
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- Publication type:
- Article
A hybrid deep learning framework for bacterial named entity recognition with domain features.
- Published in:
- BMC Bioinformatics, 2019, v. 20, p. 1, doi. 10.1186/s12859-019-3071-3
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- Publication type:
- Article
Localized Phase Transformation Triggering Lattice Matching of Metal Oxide and Carbonate Hydroxide for Efficient CO<sub>2</sub> Photoreduction.
- Published in:
- Small, 2023, v. 19, n. 45, p. 1, doi. 10.1002/smll.202302683
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- Publication type:
- Article
Mining Temporal Protein Complex Based on the Dynamic PIN Weighted with Connected Affinity and Gene Co-Expression.
- Published in:
- PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0153967
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- Publication type:
- Article
CyanoMapDB: a database integrating experimentally validated protein-protein interactions in cyanobacteria.
- Published in:
- Plant Physiology, 2023, v. 191, n. 3, p. 1535, doi. 10.1093/plphys/kiac594
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- Publication type:
- Article
Modularity in the genetic disease-phenotype network
- Published in:
- FEBS Letters, 2008, v. 582, n. 17, p. 2549, doi. 10.1016/j.febslet.2008.06.023
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- Publication type:
- Article