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Next steps in studying the human microbiome and health in prospective studies, Bethesda, MD, May 16–17, 2017.
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- Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0596-z
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- Article
Daylight exposure modulates bacterial communities associated with household dust.
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- Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0559-4
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- Article
Schrödinger's microbes: Tools for distinguishing the living from the dead in microbial ecosystems.
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- Microbiome, 2017, v. 5, n. 1, p. 1, doi. 10.1186/s40168-017-0285-3
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- Article
Methods in Nutrition & Gut Microbiome Research: An American Society for Nutrition Satellite Session [13 October 2022].
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- Nutrients, 2023, v. 15, n. 11, p. 2451, doi. 10.3390/nu15112451
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- Article
Sixty years of genome biology.
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- Genome Biology, 2013, v. 14, n. 4, p. 113, doi. 10.1186/gb-2013-14-4-113
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- Article
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment.
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- Genome Biology, 2012, v. 13, n. 9, p. r79, doi. 10.1186/gb-2012-13-9-r79
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- Article
Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples.
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- Genome Biology, 2012, v. 13, n. 6, p. 1, doi. 10.1186/gb-2012-13-6-r42
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- Article
Computational biology: plus c'est la même chose, plus ça change.
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- Genome Biology, 2011, v. 12, n. 8, p. 307, doi. 10.1186/gb-2011-12-8-307
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- Article
Metagenomic biomarker discovery and explanation.
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- Genome Biology, 2011, v. 12, n. 6, p. 1, doi. 10.1186/gb-2011-12-6-r60
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- Article
Integrated functional networks of process, tissue, and developmental stage specific interactions in Arabidopsis thaliana.
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- BMC Systems Biology, 2010, v. 4, p. 180, doi. 10.1186/1752-0509-4-180
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- Article
Analysis of the Associations Between the Human Fecal Microbiome and Bone Density, Structure, and Strength: The Osteoporotic Fractures in Men (MrOS) Cohort.
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- Journal of Bone & Mineral Research, 2022, v. 37, n. 4, p. 597, doi. 10.1002/jbmr.4518
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- Article
Microbiota Contribute to Obesity-related Increases in the Pulmonary Response to Ozone.
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- American Journal of Respiratory Cell & Molecular Biology, 2019, v. 61, n. 6, p. 702, doi. 10.1165/rcmb.2019-0144OC
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- Article
The Microbiome Regulates Pulmonary Responses to Ozone in Mice.
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- American Journal of Respiratory Cell & Molecular Biology, 2018, v. 59, n. 3, p. 346, doi. 10.1165/rcmb.2017-0404OC
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- Article
Dietary lignans, plasma enterolactone levels, and metabolic risk in men: exploring the role of the gut microbiome.
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- BMC Microbiology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12866-022-02495-0
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- Article
Author Correction: Optimized model architectures for deep learning on genomic data.
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- 2024
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- Correction Notice
Optimized model architectures for deep learning on genomic data.
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- Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06161-1
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- Article
Optimized model architectures for deep learning on genomic data.
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- Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06161-1
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- Article
Pet Attachment and Anxiety and Depression in Middle-Aged and Older Women.
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- JAMA Network Open, 2024, v. 7, n. 8, p. e2424810, doi. 10.1001/jamanetworkopen.2024.24810
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- Article
Complete genome sequence of the thermophilic Acidobacteria, Pyrinomonas methylaliphatogenes type strain K22.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0099-5
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- Article
Cross-biome comparison of microbial association networks.
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- Frontiers in Microbiology, 2015, v. 6, p. 1, doi. 10.3389/fmicb.2015.01200
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- Article
Host and gut microbiota symbiotic factors: lessons from inflammatory bowel disease and successful symbionts.
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- Cellular Microbiology, 2011, v. 13, n. 4, p. 508, doi. 10.1111/j.1462-5822.2011.01572.x
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- Article
Infected erythrocyte-derived extracellular vesicles alter vascular function via regulatory Ago2-miRNA complexes in malaria.
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- Nature Communications, 2016, v. 7, n. 10, p. 12727, doi. 10.1038/ncomms12727
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- Article
Intestinal microbiome analyses identify melanoma patients at risk for checkpoint-blockade-induced colitis.
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- Nature Communications, 2016, v. 7, n. 2, p. 10391, doi. 10.1038/ncomms10391
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- Article
PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes.
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- Nature Communications, 2013, v. 4, n. 8, p. 2304, doi. 10.1038/ncomms3304
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- Article
Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability.
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- Science Translational Medicine, 2016, v. 8, n. 343, p. 1, doi. 10.1126/scitranslmed.aad0917
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- Article
Determinants of Staphylococcus aureus carriage in the developing infant nasal microbiome.
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- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02209-7
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- Article
Dietary fiber intake, the gut microbiome, and chronic systemic inflammation in a cohort of adult men.
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- Genome Medicine, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13073-021-00921-y
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- Article
The colorectal cancer-associated faecal microbiome of developing countries resembles that of developed countries.
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- Genome Medicine, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13073-021-00844-8
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- Article
The colorectal cancer-associated faecal microbiome of developing countries resembles that of developed countries.
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- Genome Medicine, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13073-021-00844-8
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- Article
Strain-level epidemiology of microbial communities and the human microbiome.
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- Genome Medicine, 2020, v. 12, n. 1, p. 1, doi. 10.1186/s13073-020-00765-y
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- Article
Association of midlife antibiotic use with subsequent cognitive function in women.
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- PLoS ONE, 2022, v. 17, n. 3, p. 1, doi. 10.1371/journal.pone.0264649
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- Article
Metagenomics of the Gut Microbiome in Parkinson's Disease: Prodromal Changes.
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- Annals of Neurology, 2023, v. 94, n. 3, p. 486, doi. 10.1002/ana.26719
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- Article
American Diabetes Association and JDRF Research Symposium: Diabetes and the Microbiome.
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- 2015
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- journal article
Global Assessment of Genomic Regions Required for Growth in Mycobacterium tuberculosis.
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- PLoS Pathogens, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.ppat.1002946
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- Article
Multivariable association discovery in population-scale meta-omics studies.
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- PLoS Computational Biology, 2021, v. 17, n. 11, p. 1, doi. 10.1371/journal.pcbi.1009442
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- Article
A statistical model for describing and simulating microbial community profiles.
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- PLoS Computational Biology, 2021, v. 17, n. 9, p. 1, doi. 10.1371/journal.pcbi.1008913
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- Article
Structure, function and diversity of the healthy human microbiome.
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- Nature, 2012, v. 486, n. 7402, p. 207, doi. 10.1038/nature11234
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- Article
A framework for human microbiome research.
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- Nature, 2012, v. 486, n. 7402, p. 215, doi. 10.1038/nature11209
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- Article
Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3.
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- eLife, 2021, p. 1, doi. 10.7554/eLife.65088
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- Article
curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome.
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- Database: The Journal of Biological Databases & Curation, 2013, v. 2013, p. 1, doi. 10.1093/database/bat013
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- Article
Timing and duration of dog walking and dog owner's chronotype in relation to incident depression risk among middle to older-aged female nurses.
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- PLoS ONE, 2024, v. 19, n. 1, p. 1, doi. 10.1371/journal.pone.0296922
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- Article
Reprograming of gut microbiome energy metabolism by the FUT2 Crohn's disease risk polymorphism.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 11, p. 2193, doi. 10.1038/ismej.2014.64
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- Article
Gut microbiome composition and function in experimental colitis during active disease and treatment-induced remission.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 7, p. 1403, doi. 10.1038/ismej.2014.3
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- Publication type:
- Article
Gene-targeted metagenomic analysis of glucan-branching enzyme gene profiles among human and animal fecal microbiota.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 3, p. 493, doi. 10.1038/ismej.2013.167
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- Publication type:
- Article
Two-stage microbial community experimental design.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 12, p. 2330, doi. 10.1038/ismej.2013.139
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- Article
The oral microbiome in relation to pancreatic cancer risk in African Americans.
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- 2022
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- Publication type:
- journal article
Integrated annotation prioritizes metabolites with bioactivity in inflammatory bowel disease.
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- Molecular Systems Biology, 2024, v. 20, n. 4, p. 338, doi. 10.1038/s44320-024-00027-8
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- Article
Computationally Driven, Quantitative Experiments Discover Genes Required for Mitochondrial Biogenesis.
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- PLoS Genetics, 2009, v. 5, n. 3, p. 1, doi. 10.1371/journal.pgen.1000407
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- Article
Computational Reconstruction of NFκB Pathway Interaction Mechanisms during Prostate Cancer.
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- PLoS Computational Biology, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pcbi.1004820
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- Article
High-Specificity Targeted Functional Profiling in Microbial Communities with ShortBRED.
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- PLoS Computational Biology, 2015, v. 11, n. 12, p. 1, doi. 10.1371/journal.pcbi.1004557
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- Article