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Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota.
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- Scientific Data, 2024, v. 11, n. 1, p. 1, doi. 10.1038/s41597-024-03826-8
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Draft genome sequence of Actinotignum schaalii DSM 15541<sup>T</sup>: Genetic insights into the lifestyle, cell fitness and virulence.
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- PLoS ONE, 2017, v. 12, n. 12, p. 1, doi. 10.1371/journal.pone.0188914
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Symbiosis insights through metagenomic analysis of a microbial consortium.
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- Nature, 2006, v. 443, n. 7114, p. 950, doi. 10.1038/nature05192
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- Article
Draft genome of Paraburkholderia caballeronis TNe-841<sup>T</sup>, a free-living, nitrogen-fixing, tomato plant-associated bacterium.
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- Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0294-7
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- Article
Draft genome sequence of Marinobacterium rhizophilum CL-YJ9<sup>T</sup> (DSM 18822<sup>T</sup>), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica.
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- Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0275-x
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High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460.
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- Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0258-y
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482<sup>T</sup>, isolated from raw cow milk.
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- Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0242-6
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High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698).
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- Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0236-4
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Complete genome sequence of Jiangella gansuensis strain YIM 002<sup>T</sup> (DSM 44835<sup>T</sup>), the type species of the genus Jiangella and source of new antibiotic compounds.
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- Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0226-6
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Permanent draft genome of Thiobacillus thioparus DSM 505<sup>T</sup>, an obligately chemolithoautotrophic member of the Betaproteobacteria.
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- Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0229-3
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- Article
High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia.
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- Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-016-0212-4
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- Article
Permanent draft genome of Thermithiobacillus tepidarius DSM 3134T, a moderately thermophilic, obligately chemolithoautotrophic member of the Acidithiobacillia.
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- Standards in Genomic Sciences, 2016, p. 1, doi. 10.1186/s40793-016-0188-0
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An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1<sup>T</sup>.
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- Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0193-3
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High quality draft genome sequences of Pseudomonas fulva DSM 17717<sup>T</sup>, Pseudomonas parafulva DSM 17004<sup>T</sup> and Pseudomonas cremoricolorata DSM 17059<sup>T</sup> type strains.
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- Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0178-2
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Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil.
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- Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0168-4
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High-quality draft genome sequence of Flavobacterium suncheonense GH29-5<sup>T</sup> (DSM 17707<sup>T</sup>) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5<sup>T</sup>.
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- Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0159-5
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Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050<sup>T</sup> (DSM 19838<sup>T</sup>) and Gramella portivictoriae UST040801-001<sup>T</sup> (DSM 23547<sup>T</sup>), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et al. 2014 and Gramella portivictoriae Lau et al. 2005
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- Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0163-9
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Erratum to: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).
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- Standards in Genomic Sciences, 2016, v. 11, n. 1, p. 1, doi. 10.1186/s40793-016-0148-8
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High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409 with an incomplete denitrification pathway.
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- Standards in Genomic Sciences, 2016, v. 11, n. 1, p. 1, doi. 10.1186/s40793-016-0140-3
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The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4).
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- Standards in Genomic Sciences, 2016, v. 11, n. 1, p. 1, doi. 10.1186/s40793-016-0138-x
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High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775, a plant pathogen of French bean pods.
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- Standards in Genomic Sciences, 2016, v. 11, n. 1, p. 1, doi. 10.1186/s40793-015-0127-5
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Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0115-9
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High-quality draft genome sequence of Gracilimonas tropica CL-CB462 (DSM 19535), isolated from a Synechococcus culture.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0088-8
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- Article
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0077-y
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- Article
High quality draft genome sequence of Meganema perideroedes str. Gr1<sup>T</sup> and a proposal for its reclassification to the family Meganemaceae fam. nov.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0013-1
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Genome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P<sup>T</sup>), a representative of the Roseobacter group.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0050-9
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High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395<sup>T</sup> (DSM 45146<sup>T</sup>).
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0036-7
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High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884<sup>T</sup>) isolated from a Chironomus sp. egg mass.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0010-4
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Large-scale contamination of microbial isolate genomes by Illumina PhiX control.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/1944-3277-10-18
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1<sup>T</sup> (DSM 17521<sup>T</sup>) isolated from muddy waters of a drainage system in Chandigarh, India.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/1944-3277-10-8
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Genome sequence of Ensifer arboris strain LMG 14919; a microsymbiont of the legume Prosopis chilensis growing in Kosti, Sudan.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 473, doi. 10.4056/sigs.4828625
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Draft genome sequence of Halomonas lutea strain YIM 91125<sup>T</sup> (DSM 23508<sup>T</sup>) isolated from the alkaline Lake Ebinur in Northwest China.
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- Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/1944-3277-10-1
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Genome sequence of Burkholderia mimosarum strain LMG 23256, a Mimosa pigra microsymbiont from Anso, Taiwan.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 484, doi. 10.4056/sigs.4848627
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Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2230 from Karijini National Park, Australia.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 551, doi. 10.4056/sigs.5008793
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Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 514, doi. 10.4056/sigs.4938652
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Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 540, doi. 10.4056/sigs.4548266
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Genome sequence of the Medicago-nodulating Ensifer meliloti commercial inoculant strain RRI128.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 602, doi. 10.4056/sigs.4929626
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Genome sequence of the Wenxinia marina type strain (DSM 24838), a representative of the Roseobacter group isolated from oilfield sediments.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 855, doi. 10.4056/sigs.5601028
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High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1020, doi. 10.4056/sigs.5449586
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The complete genome sequence of Clostridium indolis DSM 755.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1089, doi. 10.4056/sigs.5281010
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Genome sequence of Microvirga lupini strain LUT6, a novel Lupinus alphaproteobacterial microsymbiont from Texas.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1159, doi. 10.4056/sigs.5249382
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Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1168, doi. 10.4056/sigs.5018795
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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California.
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- Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1259, doi. 10.4056/sigs.5029016
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- Article
Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012.
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- Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 283, doi. 10.4056/sigs.4528262
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Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597.
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- Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 264, doi. 10.4056/sigs.4508258
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Genome sequence of the Ornithopus/Lupinus-nodulating Bradyrhizobium sp. strain WSM471.
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- Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 254, doi. 10.4056/sigs.4498256
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Genome sequence of the lupin-nodulating Bradyrhizobium sp. strain WSM1417.
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- Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 273, doi. 10.4056/sigs.4518260
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Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1.
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- Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 243, doi. 10.4056/sigs.4488254
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- Article
Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17.
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- Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 315, doi. 10.4056/sigs.4608286
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Genome sequence of Ensifer sp. TW10; a Tephrosia wallichii (Biyani) microsymbiont native to the Indian Thar Desert.
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- Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 304, doi. 10.4056/sigs.4598281
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- Article