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Genetically stable kill-switch using "demon and angel" expression construct of essential genes.
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- Frontiers in Bioengineering & Biotechnology, 2024, p. 01, doi. 10.3389/fbioe.2024.1365870
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KEGG-Based Pathway Visualization Tool for Complex Omics Data.
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- In Silico Biology, 2005, v. 5, n. 4, p. 419
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- Article
Integrating reductive and synthetic approaches in biology using man-made cell-like compartments.
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- Scientific Reports, 2014, p. 1, doi. 10.1038/srep04722
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- Article
Update of thermotolerant genes essential for survival at a critical high temperature in Escherichia coli.
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- PLoS ONE, 2018, v. 13, n. 2, p. 1, doi. 10.1371/journal.pone.0189487
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- Article
Identification of key regulators in glycogen utilization in E. coli based on the simulations from a hybrid functional Petri net model.
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- BMC Systems Biology, 2013, v. 7, p. 1, doi. 10.1186/1752-0509-7-S6-S1
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- Article
Effect of codon adaptation on codon-level and genelevel translation efficiency in vivo.
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- BMC Genomics, 2014, v. 15, n. 1, p. 1634, doi. 10.1186/1471-2164-15-1115
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- Article
Accumulation of heme biosynthetic intermediates contributes to the antibacterial action of the metalloid tellurite.
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- Nature Communications, 2017, v. 8, n. 5, p. 15320, doi. 10.1038/ncomms15320
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- Article
Cell Lysis Directed by SulA in Response to DNA Damage in Escherichia coli.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 9, p. 4535, doi. 10.3390/ijms22094535
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The Escherichia coli K-12 ORFeome: a resource for comparative molecular microbiology.
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- BMC Genomics, 2010, v. 11, p. 470, doi. 10.1186/1471-2164-11-470
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- Article
Evolved bacterial resistance against fluoropyrimidines can lower chemotherapy impact in the Caenorhabditis elegans host.
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- eLife, 2020, p. 1, doi. 10.7554/eLife.59831
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Ribosome binding proteins YhbH and YfiA have opposite functions during 100S formation in the stationary phase of Escherichia coli.
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- Genes to Cells, 2005, v. 10, n. 12, p. 1103, doi. 10.1111/j.1365-2443.2005.00903.x
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- Article
Characterization of HscC (Hsc62), homologue of Hsp70 in Escherichia coli: over-expression of HscC modulates the activity of house keeping sigma factor σ<sup>70</sup>.
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- Genes to Cells, 2002, v. 7, n. 6, p. 553, doi. 10.1046/j.1365-2443.2002.00545.x
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- Article
Construction of a Contiguous 874-kb Sequence of the Escherichia coli-K12 Genome Corresponding to 50.0–68.8 min on the Linkage Map and Analysis of Its Sequence Features*.
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- DNA Research, 1997, v. 4, n. 2, p. 91, doi. 10.1093/dnares/4.2.91
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Construction of a Contiguous 874-kb Sequence of the Escherichia coli K-12 Genome Corresponding to the 50.0–68.8 min on the Linkage Map and Analysis of Its Sequence Features (Supplement).
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- DNA Research, 1997, v. 4, n. 2, p. 169, doi. 10.1093/dnares/4.2.169
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- Article
A 570-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 28.0–40.1 min Region on the Linkage Map (Supplement).
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- DNA Research, 1996, v. 3, n. 6, p. 435, doi. 10.1093/dnares/3.6.435
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- Article
A 460-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 40.1–50.0 min Region on the Linkage Map (Supplement).
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- DNA Research, 1996, v. 3, n. 6, p. 441, doi. 10.1093/dnares/3.6.441
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- Article
A 460-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 40.1–50.0 min Region on the Linkage Map.
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- DNA Research, 1996, v. 3, n. 6, p. 379, doi. 10.1093/dnares/3.6.379
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- Article
A 570-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 28.0–40.1 min Region on the Linkage Map.
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- DNA Research, 1996, v. 3, n. 6, p. 363, doi. 10.1093/dnares/3.6.363
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- Article
A 718-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 12.7–28.0 min Region on the Linkage Map (Supplement).
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- DNA Research, 1996, v. 3, n. 3, p. 211, doi. 10.1093/dnares/3.3.211
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- Article
A 718-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 12.7–28.0 min Region on the Linkage Map.
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- DNA Research, 1996, v. 3, n. 3, p. 137, doi. 10.1093/dnares/3.3.137
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- Article
The crystal structure of leucyl/phenylalanyl-tRNA-protein transferase from Escherichia coli.
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- Protein Science: A Publication of the Protein Society, 2007, v. 16, n. 3, p. 528, doi. 10.1110/ps.062616107
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Colony-live —a high-throughput method for measuring microbial colony growth kinetics—reveals diverse growth effects of gene knockouts in Escherichia coli.
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- BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-171
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Bacterial persisters are a stochastically formed subpopulation of low-energy cells.
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- PLoS Biology, 2021, v. 19, n. 4, p. 1, doi. 10.1371/journal.pbio.3001194
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GroEL Chaperone Binding to Beetle Luciferases and the Implications for Refolding When Co-expressed.
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- Bioscience, Biotechnology & Biochemistry, 2004, v. 68, n. 10, p. 2096, doi. 10.1271/bbb.68.2096
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ENVIRONMENTAL DEPENDENCY OF GENE KNOCKOUTS ON PHENOTYPE MICROARRAY ANALYSIS IN ESCHERICHIA COLI.
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- Journal of Bioinformatics & Computational Biology, 2010, v. 8, p. 83, doi. 10.1142/S021972001000521X
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Comprehensive identification of translation start sites by tetracycline-inhibited ribosome profiling.
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- DNA Research, 2016, v. 23, n. 3, p. 193, doi. 10.1093/dnares/dsw008
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A Genome-wide Approach to Identify the Genes Involved in Biofilm Formation in E. coli.
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- DNA Research, 2007, v. 14, n. 6, p. 237
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Complete set of ORF clones of Escherichia coli ASKA library (A Complete Set of E. coli K-12 ORF Archive): Unique Resources for Biological Research.
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- DNA Research, 2005, v. 12, n. 5, p. 291
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A Complete Set of Escherichia coli Open Reading Frames in Mobile Plasmids Facilitating Genetic Studies.
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- DNA Research, 2005, v. 12, n. 1, p. 63, doi. 10.1093/dnares/12.1.63
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- Article
Distribution of Repetitive Sequences on the Leading and Lagging Strands of the Escherichia coli Genome: Comparative Study of Long Direct Repeat (LDR) Sequences.
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- DNA Research, 2002, v. 9, n. 1, p. 1, doi. 10.1093/dnares/9.1.1
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Conservation of Translation Initiation Sites Based on Dinucleotide Frequency and Codon Usage in Escherichia coli K-12 (W3110): Non-random Distribution of A/T-rich Sequences Immediately Upstream of the Translation Initiation Codon.
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- DNA Research, 2002, v. 9, n. 1, p. 19, doi. 10.1093/dnares/9.1.19
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Phylogenetic Analysis of the Third Hsp70 Homolog in Escherichia coli; a Novel Member of the Hsc66 Subfamily and Its Possible Co-chaperone.
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- DNA Research, 1999, v. 6, n. 5, p. 299, doi. 10.1093/dnares/6.5.299
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High-throughput Fluorescence Labelling of Full-length cDNA Products Based on a Reconstituted Translation System.
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- Journal of Biochemistry, 2007, v. 141, n. 1, p. 19, doi. 10.1093/jb/mvm003
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Application of capillary electrophoresis-mass spectrometry to synthetic in vitro glycolysis studies.
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- Electrophoresis, 2004, v. 25, n. 13, p. 1996, doi. 10.1002/elps.200305905
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Systematic Production of Inactivating and Non-Inactivating Suppressor Mutations at the relA Locus That Compensate the Detrimental Effects of Complete spoT Loss and Affect Glycogen Content in Escherichia coli.
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- PLoS ONE, 2014, v. 9, n. 9, p. 1, doi. 10.1371/journal.pone.0106938
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Comparative Genomics and Drug Resistance of a Geographic Variant of ST239 Methicillin-Resistant Staphylococcus aureus Emerged in Russia.
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- PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0029187
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Genome-scale identification and characterization of moonlighting proteins.
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- Biology Direct, 2014, v. 9, n. 1, p. 29, doi. 10.1186/s13062-014-0030-9
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Development of a system for discovery of genetic interactions for essential genes in Escherichia coli K-12.
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- Genes & Genetic Systems, 2013, v. 88, n. 4, p. 233, doi. 10.1266/ggs.88.233
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Escherichia coli proteome chips for detecting protein-protein interactions.
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- Proteomics, 2006, v. 6, n. 24, p. 6433, doi. 10.1002/pmic.200600341
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Past, Present, and Future of Genome Modification in Escherichia coli.
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- Microorganisms, 2022, v. 10, n. 9, p. 1835, doi. 10.3390/microorganisms10091835
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In vitro membrane protein synthesis inside Sec translocon-reconstituted cell-sized liposomes.
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- Scientific Reports, 2016, p. 36466, doi. 10.1038/srep36466
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Investigating the effects of perturbations to pgi and eno gene expression on central carbon metabolism in Escherichia coli using <sup>13</sup> C metabolic flux analysis.
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- Microbial Cell Factories, 2012, v. 11, n. 1, p. 87, doi. 10.1186/1475-2859-11-87
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Analysis of Escherichia coli anaplerotic metabolism and its regulation mechanisms from the metabolic responses to altered dilution rates and phosphoenolpyruvate carboxykinase knockout.
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- Biotechnology & Bioengineering, 2003, v. 84, n. 2, p. 129, doi. 10.1002/bit.10692
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The outer membrane TolC is involved in cysteine tolerance and overproduction in Escherichia coli.
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- Applied Microbiology & Biotechnology, 2009, v. 81, n. 5, p. 903, doi. 10.1007/s00253-008-1686-9
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GlgS, described previously as a glycogen synthesis control protein, negatively regulates motility and biofilm formation in Escherichia coli.
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- Biochemical Journal, 2013, v. 452, n. 3, p. 559, doi. 10.1042/BJ20130154
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Combinatorial selection for replicable RNA by Qβ replicase while maintaining encoded gene function.
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- PLoS ONE, 2017, v. 12, n. 3, p. 1, doi. 10.1371/journal.pone.0174130
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The yfhQ gene of Escherichia coli encodes a tRNA:Cm32/Um32 methyltransferase.
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- BMC Molecular Biology, 2006, v. 7, p. 1, doi. 10.1186/1471-2199-7-23
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Escherichia coli K-12: a cooperatively developed annotation snapshot—2005.
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- Nucleic Acids Research, 2006, v. 34, n. 1, p. 1, doi. 10.1093/nar/gkj405
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High-throughput, quantitative analyses of genetic interactions in E. coli.
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- Nature Methods, 2008, v. 5, n. 9, p. 781, doi. 10.1038/nmeth.1240
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eSGA: E. coli synthetic genetic array analysis.
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- Nature Methods, 2008, v. 5, n. 9, p. 789, doi. 10.1038/nmeth.1239
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