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Inferring kinase activity from phosphoproteomic data: Tool comparison and recent applications.
- Published in:
- Mass Spectrometry Reviews, 2024, v. 43, n. 4, p. 725, doi. 10.1002/mas.21808
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- Article
Candidate biomarkers for treatment benefit from sunitinib in patients with advanced renal cell carcinoma using mass spectrometry-based (phospho)proteomics.
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- Clinical Proteomics, 2023, v. 20, n. 1, p. 1, doi. 10.1186/s12014-023-09437-6
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- Article
A transformer architecture for retention time prediction in liquid chromatography mass spectrometry‐based proteomics.
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- Proteomics, 2023, v. 23, n. 7, p. 1, doi. 10.1002/pmic.202200041
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- Article
Kinase activities in pancreatic ductal adenocarcinoma with prognostic and therapeutic avenues.
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- Molecular Oncology, 2024, v. 18, n. 8, p. 2020, doi. 10.1002/1878-0261.13625
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- Article
msproteomics sitereport: reporting DIA-MS phosphoproteomics experiments at site level with ease.
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- Bioinformatics, 2024, v. 40, n. 7, p. 1, doi. 10.1093/bioinformatics/btae432
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- Article
iq: an R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics.
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- Bioinformatics, 2020, v. 36, n. 8, p. 2611, doi. 10.1093/bioinformatics/btz961
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- Article
Phosphoproteomic profiling of T cell acute lymphoblastic leukemia reveals targetable kinases and combination treatment strategies.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28682-1
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- Article
Phosphoproteomics of patient-derived xenographs identifies targets and markers associated with sensitivity and resistance to EGFR blockade in colorectal cancer.
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- Science Translational Medicine, 2023, v. 15, n. 709, p. 1, doi. 10.1126/scitranslmed.abm3687
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- Article
Quantitative Phosphoproteomic Analysis Reveals Dendritic Cell- Specific STAT Signaling After α2-3–Linked Sialic Acid Ligand Binding.
- Published in:
- Frontiers in Immunology, 2021, v. 11, p. N.PAG, doi. 10.3389/fimmu.2021.673454
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- Article
INKA, an integrative data analysis pipeline for phosphoproteomic inference of active kinases.
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- 2019
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- Correction Notice
INKA, an integrative data analysis pipeline for phosphoproteomic inference of active kinases.
- Published in:
- Molecular Systems Biology, 2019, v. 15, n. 4, p. N.PAG, doi. 10.15252/msb.20188250
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- Publication type:
- Article