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Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa.
Published in:
Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1236, doi. 10.1038/nsmb1013-1236b
By:
- Erkek, Serap;
- Hisano, Mizue;
- Liang, Ching-Yeu;
- Gill, Mark;
- Murr, Rabih;
- Dieker, Jürgen;
- Schübeler, Dirk;
- van der Vlag, Johan;
- Stadler, Michael B;
- Peters, Antoine H F M
Publication type:
Article
Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa.
Published in:
Nature Structural & Molecular Biology, 2013, v. 20, n. 7, p. 868, doi. 10.1038/nsmb.2599
By:
- Erkek, Serap;
- Hisano, Mizue;
- Liang, Ching-Yeu;
- Gill, Mark;
- Murr, Rabih;
- Dieker, Jürgen;
- Schübeler, Dirk;
- Vlag, Johan van der;
- Stadler, Michael B;
- Peters, Antoine H F M
Publication type:
Article
Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa.
Published in:
Nature Structural & Molecular Biology, 2010, v. 17, n. 6, p. 679, doi. 10.1038/nsmb.1821
By:
- Brykczynska, Urszula;
- Hisano, Mizue;
- Erkek, Serap;
- Ramos, Liliana;
- Oakeley, Edward J.;
- Roloff, Tim C.;
- Beisel, Christian;
- Schübeler, Dirk;
- Stadler, Michael B.;
- Peters, Antoine H. F. M.
Publication type:
Article
Na/I Symporter and Type 3 Iodothyronine Deiodinase Gene Expression in Amniotic Membrane and Placenta and Its Relationship to Maternal Thyroid Hormones.
Published in:
Biological Trace Element Research, 2013, v. 154, n. 3, p. 338, doi. 10.1007/s12011-013-9748-y
By:
- Akturk, Mujde;
- Oruc, Ayla;
- Danisman, Nuri;
- Erkek, Serap;
- Buyukkagnici, Umran;
- Unlu, Elmas;
- Tazebay, Uygar
Publication type:
Article
Coiled-Coil Domain Containing Protein 124 Is a Novel Centrosome and Midbody Protein That Interacts with the Ras-Guanine Nucleotide Exchange Factor 1B and Is Involved in Cytokinesis.
Published in:
PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069289
By:
- Telkoparan, Pelin;
- Erkek, Serap;
- Yaman, Elif;
- Alotaibi, Hani;
- Bayık, Defne;
- Tazebay, Uygar H.
Publication type:
Article
Classification of bladder cancer cell lines according to regulon activity.
Published in:
Turkish Journal of Biology, 2021, v. 45, n. 6, p. 656, doi. 10.3906/biy-2107-72
By:
- ERAY, Aleyna;
- ERKEK-ÖZHAN, Serap
Publication type:
Article
Lsd1 as a therapeutic target in Gfi1-activated medulloblastoma.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-08269-5
By:
- Lee, Catherine;
- Rudneva, Vasilisa A.;
- Erkek, Serap;
- Zapatka, Marc;
- Chau, Lianne Q.;
- Tacheva-Grigorova, Silvia K.;
- Garancher, Alexandra;
- Rusert, Jessica M.;
- Aksoy, Ozlem;
- Lea, Robin;
- Mohammad, Helai P.;
- Wang, Jianxun;
- Weiss, William A.;
- Grimes, H. Leighton;
- Pfister, Stefan M.;
- Northcott, Paul A.;
- Wechsler-Reya, Robert J.
Publication type:
Article
ATRT-09. INTEGRATIVE ANALYSES OF GENE REGULATORY LANDSCAPES REVEAL RHABDOID TUMOR SUBGROUPS WITH POSSIBLE IMMUNE MODULATION THROUGH EPIGENETIC DYSREGULATION.
Published in:
Neuro-Oncology, 2019, v. 21, p. ii64, doi. 10.1093/neuonc/noz036.008
By:
- Johann, Pascal;
- Chun, Hye-Jung;
- Erkek, Serap;
- Iskar, Murat;
- Perlman, Elizabeth;
- Hasselblatt, Martin;
- Pfister, Stefan M;
- Marra, Marco;
- Kool, Marcel
Publication type:
Article
ATRT-07. TARGETING PRIMARY CILIOGENESIS IN ATYPICAL TERATOID/RHABDOID TUMORS.
Published in:
Neuro-Oncology, 2019, v. 21, p. ii64, doi. 10.1093/neuonc/noz036.006
By:
- Blümel, Lena;
- Kerl, Kornelius;
- Qin, Nan;
- Berlandi, Johannes;
- Thiel, Katharina;
- Tegeder, Isabel;
- Jeibmann, Astrid;
- Paisana, Eunice;
- Custódia, Carlos;
- Picard, Daniel;
- Langini, Maike;
- Stühler, Kai;
- Meyer, Frauke-Dorothee;
- Malzkorn, Bastian;
- Liebau, Max C;
- Johann, Pascal D;
- Erkek, Serap;
- Kool, Marcel;
- Pfister, Stefan M;
- Frühwald, Michael C
Publication type:
Article
Analysis of open chromatin regions in bladder cancer links β-catenin mutations and Wnt signaling with neuronal subtype of bladder cancer.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-75688-0
By:
- Eray, Aleyna;
- Güneri, Perihan Yağmur;
- Yılmaz, Gülden Özden;
- Karakülah, Gökhan;
- Erkek-Ozhan, Serap
Publication type:
Article
Retinoic acid signaling and bladder cancer: Epigenetic deregulation, therapy and beyond.
Published in:
International Journal of Cancer, 2021, v. 148, n. 10, p. 2364, doi. 10.1002/ijc.33374
By:
- Ozgun, Gizem;
- Senturk, Serif;
- Erkek-Ozhan, Serap
Publication type:
Article
Primary cilia contribute to the aggressiveness of atypical teratoid/rhabdoid tumors.
Published in:
Cell Death & Disease, 2022, v. 13, n. 9, p. 1, doi. 10.1038/s41419-022-05243-4
By:
- Blümel, Lena;
- Qin, Nan;
- Berlandi, Johannes;
- Paisana, Eunice;
- Cascão, Rita;
- Custódia, Carlos;
- Pauck, David;
- Picard, Daniel;
- Langini, Maike;
- Stühler, Kai;
- Meyer, Frauke-Dorothee;
- Göbbels, Sarah;
- Malzkorn, Bastian;
- Liebau, Max C.;
- Barata, João T.;
- Jeibmann, Astrid;
- Kerl, Kornelius;
- Erkek, Serap;
- Kool, Marcel;
- Pfister, Stefan M.
Publication type:
Article
Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma.
Published in:
Nature, 2014, v. 511, n. 7510, p. 428, doi. 10.1038/nature13379
By:
- Northcott, Paul A.;
- Lee, Catherine;
- Zichner, Thomas;
- Stütz, Adrian M.;
- Erkek, Serap;
- Kawauchi, Daisuke;
- Shih, David J. H.;
- Hovestadt, Volker;
- Zapatka, Marc;
- Sturm, Dominik;
- Jones, David T. W.;
- Kool, Marcel;
- Remke, Marc;
- Cavalli, Florence M. G.;
- Zuyderduyn, Scott;
- Bader, Gary D.;
- VandenBerg, Scott;
- Esparza, Lourdes Adriana;
- Ryzhova, Marina;
- Wang, Wei
Publication type:
Article
Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing.
Published in:
Nature, 2014, v. 510, n. 7506, p. 537, doi. 10.1038/nature13268
By:
- Hovestadt, Volker;
- T. W., David;
- Jones;
- Picelli, Simone;
- Wei Wang;
- Kool, Marcel;
- A., Paul;
- Northcott;
- Sultan, Marc;
- Stachurski, Katharina;
- Ryzhova, Marina;
- Warnatz, Hans-Jörg;
- Raiser, Meryem;
- Brun, Sonja;
- Bunt, Jens;
- Jäger, Natalie;
- Kleinheinz, Kortine;
- Erkek, Serap;
- D., Ursula;
- Weber
Publication type:
Article
Differential Occupancy and Regulatory Interactions of KDM6A in Bladder Cell Lines.
Published in:
Cells (2073-4409), 2023, v. 12, n. 6, p. 836, doi. 10.3390/cells12060836
By:
- Özden-Yılmaz, Gülden;
- Savas, Busra;
- Bursalı, Ahmet;
- Eray, Aleyna;
- Arıbaş, Alirıza;
- Senturk, Serif;
- Karaca, Ezgi;
- Karakülah, Gökhan;
- Erkek-Ozhan, Serap
Publication type:
Article
InTAD: chromosome conformation guided analysis of enhancer target genes.
Published in:
BMC Bioinformatics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12859-019-2655-2
By:
- Okonechnikov, Konstantin;
- Erkek, Serap;
- Korbel, Jan O.;
- Pfister, Stefan M.;
- Chavez, Lukas
Publication type:
Article
Identification of the gene expression changes and gene regulatory aspects in ELF3 mutant bladder cancer.
Published in:
Molecular Biology Reports, 2022, v. 49, n. 4, p. 3135, doi. 10.1007/s11033-022-07145-2
By:
- Guneri-Sozeri, Perihan Yagmur;
- Erkek-Ozhan, Serap
Publication type:
Article
Functional relevance of genes predicted to be affected by epigenetic alterations in atypical teratoid/rhabdoid tumors.
Published in:
Journal of Neuro-Oncology, 2019, v. 141, n. 1, p. 43, doi. 10.1007/s11060-018-03018-6
By:
- Tegeder, Isabel;
- Thiel, Katharina;
- Erkek, Serap;
- Johann, Pascal D.;
- Berlandi, Johannes;
- Thatikonda, Venu;
- Frühwald, Michael C.;
- Kool, Marcel;
- Jeibmann, Astrid;
- Hasselblatt, Martin
Publication type:
Article
Genome-wide chromatin analysis in mature mouse and human spermatozoa.
Published in:
Nature Protocols, 2013, v. 8, n. 12, p. 2449, doi. 10.1038/nprot.2013.145
By:
- Hisano, Mizue;
- Erkek, Serap;
- Dessus-Babus, Sophie;
- Ramos, Liliana;
- Stadler, Michael B;
- Peters, Antoine H F M
Publication type:
Article
Nucleocytoplasmic β‐catenin expression contributes to neuroendocrine differentiation in muscle invasive bladder cancer.
Published in:
Cancer Science, 2024, v. 115, n. 9, p. 2985, doi. 10.1111/cas.16275
By:
- Akman, Burcu;
- Bursalı, Ahmet;
- Gürses, Mustafa;
- Suner, Aslı;
- Karakülah, Gökhan;
- Mungan, Uğur;
- Yörükoğlu, Kutsal;
- Erkek‐Ozhan, Serap
Publication type:
Article
FLI1 and FRA1 transcription factors drive the transcriptional regulatory networks characterizing muscle invasive bladder cancer.
Published in:
Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-04561-3
By:
- Guneri-Sozeri, Perihan Yagmur;
- Özden-Yılmaz, Gülden;
- Kisim, Asli;
- Cakiroglu, Ece;
- Eray, Aleyna;
- Uzuner, Hamdiye;
- Karakülah, Gökhan;
- Pesen-Okvur, Devrim;
- Senturk, Serif;
- Erkek-Ozhan, Serap
Publication type:
Article
Mesane gen regülasyonunda etkili süper-enhancer'ların belirlenmesi.
Published in:
Turkish Bulletin of Hygiene & Experimental Biology / Türk Hijyen ve Deneysel Biyoloji, 2020, v. 77, n. 1, p. 41, doi. 10.5505/TurkHijyen.2019.81904
By:
- ERKEK, Serap
Publication type:
Article

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