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CRISPR-Cas systems target a diverse collection of invasive mobile genetic elements in human microbiomes.
- Published in:
- Genome Biology, 2013, v. 14, n. 4, p. 1, doi. 10.1186/gb-2013-14-4-r40
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- Article
Dynamics of Gene Loss following Ancient Whole-Genome Duplication in the Cryptic Paramecium Complex.
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- Molecular Biology & Evolution, 2023, v. 40, n. 5, p. 1, doi. 10.1093/molbev/msad107
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- Article
Population-Genetic Lens into the Process of Gene Loss Following Whole-Genome Duplication.
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- Molecular Biology & Evolution, 2022, v. 39, n. 6, p. 1, doi. 10.1093/molbev/msac118
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- Article
Rates of Mutations and Transcript Errors in the Foodborne Pathogen Salmonella enterica subsp. enterica.
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- Molecular Biology & Evolution, 2022, v. 39, n. 4, p. 1, doi. 10.1093/molbev/msac081
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- Article
Population Genomics of Paramecium Species.
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- Molecular Biology & Evolution, 2017, v. 34, n. 5, p. 1194, doi. 10.1093/molbev/msx074
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- Article
Background Mutational Features of the Radiation-Resistant Bacterium Deinococcus radiodurans.
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- Molecular Biology & Evolution, 2015, v. 32, n. 9, p. 2383, doi. 10.1093/molbev/msv119
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- Article
Genomic and Metagenomic Analysis of Diversity-Generating Retroelements Associated with Treponema denticola.
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- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00852
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- Article
Strand-specific community RNA-seq reveals prevalent and dynamic antisense transcription in human gut microbiota.
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- Frontiers in Microbiology, 2015, p. 1, doi. 10.3389/fmicb.2015.00896
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- Article
Population Genetics of Paramecium Mitochondrial Genomes: Recombination, Mutation Spectrum, and Efficacy of Selection.
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- Genome Biology & Evolution, 2019, v. 11, n. 5, p. 1398, doi. 10.1093/gbe/evz081
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- Article
Insights into an Extensively Fragmented Eukaryotic Genome: De Novo Genome Sequencing of the Multinuclear Ciliate Uroleptopsis citrina.
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- Genome Biology & Evolution, 2018, v. 10, n. 3, p. 883, doi. 10.1093/gbe/evy055
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- Article
Mutation Rate, Spectrum, Topology, and Context-Dependency in the DNA Mismatch Repair-Deficient Pseudomonas fluorescens ATCC948.
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- Genome Biology & Evolution, 2014, v. 7, n. 1, p. 262, doi. 10.1093/gbe/evu284
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- Article
Spliced DNA Sequences in the Paramecium Germline: Their Properties and Evolutionary Potential.
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- Genome Biology & Evolution, 2013, v. 5, n. 6, p. 1200, doi. 10.1093/gbe/evt087
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- Article
The Oxytricha trifallax Mitochondrial Genome.
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- Genome Biology & Evolution, 2012, v. 4, n. 9, p. 136, doi. 10.1093/gbe/evr136
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- Article
The Oxytricha trifallax Mitochondrial Genome.
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- Genome Biology & Evolution, 2012, v. 4, n. 2, p. 136, doi. 10.1093/gbe/evr136
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- Article
RNA-mediated epigenetic programming of a genome-rearrangement pathway.
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- Nature, 2008, v. 451, n. 7175, p. 153, doi. 10.1038/nature06452
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- Article
Estimation of the Genome-Wide Mutation Rate and Spectrum in the Archaeal Species Haloferax volcanii.
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- Genetics, 2020, v. 215, n. 4, p. 1107, doi. 10.1534/genetics.120.303299
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- Article
Estimating Seven Coefficients of Pairwise Relatedness Using Population-Genomic Data.
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- Genetics, 2017, v. 206, n. 1, p. 105, doi. 10.1534/genetics.116.190660
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- Article
The Spontaneous Mutation Rate in the Fission Yeast Schizosaccharomyces pombe.
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- Genetics, 2015, v. 201, n. 2, p. 737, doi. 10.1534/genetics.115.177329
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- Article
Insights into Three Whole-Genome Duplications Gleaned from the Paramecium caudatum Genome Sequence.
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- Genetics, 2014, v. 197, n. 4, p. 1417, doi. 10.1534/genetics.114.163287
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- Article
Low Base-Substitution Mutation Rate but High Rate of Slippage Mutations in the Sequence Repeat-Rich Genome of Dictyostelium discoideum.
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- G3: Genes | Genomes | Genetics, 2020, v. 10, n. 9, p. 1, doi. 10.1534/g3.120.401578
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- Article
Limited Mutation-Rate Variation Within the Paramecium aurelia Species Complex.
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- G3: Genes | Genomes | Genetics, 2018, v. 8, n. 7, p. 2523, doi. 10.1534/g3.118.200420
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- Article
The Rate and Spectrum of Spontaneous Mutations in Mycobacterium smegmatis, a Bacterium Naturally Devoid of the Postreplicative Mismatch Repair Pathway.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 7, p. 2157, doi. 10.1534/g3.116.030130
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- Article
Diverse CRISPRs Evolving in Human Microbiomes.
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- PLoS Genetics, 2012, v. 8, n. 6, p. 1, doi. 10.1371/journal.pgen.1002441
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- Article
Diversity and Universality of Endosymbiotic Rickettsia in the Fish Parasite Ichthyophthirius multifiliis.
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- Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00189
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- Article
A Parsimony Approach to Biological Pathway Reconstruction/Inference for Genomes and Metagenomes.
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- PLoS Computational Biology, 2009, v. 5, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000465
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- Article
ADFinder: accurate detection of programmed DNA elimination using NGS high-throughput sequencing data.
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- Bioinformatics, 2020, v. 36, n. 12, p. 3632, doi. 10.1093/bioinformatics/btaa226
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- Article
The Pathway to Detangle a Scrambled Gene.
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- PLoS ONE, 2008, v. 3, n. 6, p. 1, doi. 10.1371/journal.pone.0002330
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- Article
Bats Use Magnetite to Detect the Earth's Magnetic Field.
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- PLoS ONE, 2008, v. 3, n. 2, p. 1, doi. 10.1371/journal.pone.0001676
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- Article
Insertion sequence-caused large-scale rearrangements in the genome of Escherichia coli.
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- Nucleic Acids Research, 2016, v. 44, n. 15, p. 7109, doi. 10.1093/nar/gkw647
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- Article
Expanding the catalog of cas genes with metagenomes.
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- Nucleic Acids Research, 2014, v. 42, n. 4, p. 2448, doi. 10.1093/nar/gkt1262
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- Article
Stitching gene fragments with a network matching algorithm improves gene assembly for metagenomics.
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- Bioinformatics, 2012, v. 28, n. 18, p. i363
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- Article
The gain and loss of chromosomal integron systems in the Treponema species.
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- BMC Evolutionary Biology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2148-13-16
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- Article
Subtractive assembly for comparative metagenomics, and its application to type 2 diabetes metagenomes.
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- Genome Biology, 2015, v. 16, p. 1, doi. 10.1186/s13059-015-0804-0
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- Article
Telomere formation on macronuclear chromosomes of Oxytricha trifallax and O. fallax: alternatively processed regions have multiple telomere addition sites.
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- BMC Genetics, 2002, v. 3, p. 1
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- Article