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Toward high-resolution modeling of small molecule–ion channel interactions.
- Published in:
- Frontiers in Pharmacology, 2024, p. 1, doi. 10.3389/fphar.2024.1411428
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- Publication type:
- Article
Improving de novo protein binder design with deep learning.
- Published in:
- Nature Communications, 2023, p. 1, doi. 10.1038/s41467-023-38328-5
- By:
- Publication type:
- Article
Crystal structure analysis of EstA from Arthrobacter sp. Rue61a – an insight into catalytic promiscuity.
- Published in:
- FEBS Letters, 2014, v. 588, n. 7, p. 1154, doi. 10.1016/j.febslet.2014.02.045
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- Publication type:
- Article
AlphaFold accurately predicts distinct conformations based on the oligomeric state of a de novo designed protein.
- Published in:
- Protein Science: A Publication of the Protein Society, 2022, v. 31, n. 7, p. 1, doi. 10.1002/pro.4368
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- Publication type:
- Article
In vitro elution of ciprofloxacin from polymethylmethacrylate cement beads.
- Published in:
- Journal of Orthopaedic Research, 1994, v. 12, n. 1, p. 79, doi. 10.1002/jor.1100120110
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- Publication type:
- Article
Large-scale design and refinement of stable proteins using sequence-only models.
- Published in:
- PLoS ONE, 2022, v. 17, n. 3, p. 1, doi. 10.1371/journal.pone.0265020
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- Publication type:
- Article
A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly.
- Published in:
- PLoS Pathogens, 2013, v. 9, n. 4, p. 1, doi. 10.1371/journal.ppat.1003307
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- Publication type:
- Article
The dynamic disulphide relay of quiescin sulphydryl oxidase.
- Published in:
- Nature, 2012, v. 488, n. 7411, p. 414, doi. 10.1038/nature11267
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- Publication type:
- Article
Improved molecular replacement by density- and energy-guided protein structure optimization.
- Published in:
- Nature, 2011, v. 473, n. 7348, p. 540, doi. 10.1038/nature09964
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- Publication type:
- Article
Cryo- EM structures of CTP synthase filaments reveal mechanism of pHsensitive assembly during budding yeast starvation.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.73368
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- Publication type:
- Article
Effects of a Less-invasive Surgical Technique on Cement Mantle Quality in Total Knee Arthroplasty.
- Published in:
- Orthopedics, 2012, v. 35, n. 9, p. e1329, doi. 10.3928/01477447-20120822-17
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- Publication type:
- Article
Acute Posttraumatic Catastrophic Failure of a Second-generation, Highly Cross-linked Ultra-high-molecular-weight Polyethylene Patellar Component.
- Published in:
- Orthopedics, 2012, v. 35, n. 7, p. e1119, doi. 10.3928/01477447-20120621-35
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- Publication type:
- Article
Priapism as a complication after total hip arthroplasty: a case report and review of the literature.
- Published in:
- 2008
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- Publication type:
- journal article
Evaluation of a new power-operated PMMA vacuum mixing and delivery system for cemented femoral stem insertion.
- Published in:
- 2004
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- Publication type:
- journal article
Computational design of mixed chirality peptide macrocycles with internal symmetry.
- Published in:
- Protein Science: A Publication of the Protein Society, 2020, v. 29, n. 12, p. 2433, doi. 10.1002/pro.3974
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- Publication type:
- Article
Crucial steps in the structure determination of a coronavirus spike glycoprotein using cryo-electron microscopy.
- Published in:
- Protein Science: A Publication of the Protein Society, 2017, v. 26, n. 1, p. 113, doi. 10.1002/pro.3048
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- Publication type:
- Article
Improving hybrid statistical and physical forcefields through local structure enumeration.
- Published in:
- Protein Science: A Publication of the Protein Society, 2016, v. 25, n. 8, p. 1525, doi. 10.1002/pro.2956
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- Publication type:
- Article
Relaxation of backbone bond geometry improves protein energy landscape modeling.
- Published in:
- Protein Science: A Publication of the Protein Society, 2014, v. 23, n. 1, p. 47, doi. 10.1002/pro.2389
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- Publication type:
- Article
Cryo-EM model validation using independent map reconstructions.
- Published in:
- Protein Science: A Publication of the Protein Society, 2013, v. 22, n. 6, p. 865, doi. 10.1002/pro.2267
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- Publication type:
- Article
Growing Glycans in Rosetta: Accurate de novo glycan modeling, density fitting, and rational sequon design.
- Published in:
- PLoS Computational Biology, 2024, v. 20, n. 6, p. 1, doi. 10.1371/journal.pcbi.1011895
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- Publication type:
- Article
The molecular basis for flexibility in the flexible filamentous plant viruses.
- Published in:
- Nature Structural & Molecular Biology, 2015, v. 22, n. 8, p. 642, doi. 10.1038/nsmb.3054
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- Publication type:
- Article
Crystal structure of a monomeric retroviral protease solved by protein folding game players.
- Published in:
- 2012
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- Publication type:
- Correction notice
Crystal structure of a monomeric retroviral protease solved by protein folding game players.
- Published in:
- Nature Structural & Molecular Biology, 2011, v. 18, n. 10, p. 1175, doi. 10.1038/nsmb.2119
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- Publication type:
- Article
Crystal structure of XMRV protease differs from the structures of other retropepsins.
- Published in:
- Nature Structural & Molecular Biology, 2011, v. 18, n. 2, p. 227, doi. 10.1038/nsmb.1964
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- Publication type:
- Article
Anti-diabetic drug binding site in a mammalian K<sub>ATP</sub> channel revealed by Cryo-EM.
- Published in:
- eLife, 2017, p. 1, doi. 10.7554/eLife.31054
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- Publication type:
- Article
Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta.
- Published in:
- eLife, 2016, p. 1, doi. 10.7554/eLife.17219
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- Publication type:
- Article
Precise assembly of complex beta sheet topologies from de novo designed building blocks.
- Published in:
- eLife, 2015, p. 1, doi. 10.7554/eLife.11012
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- Publication type:
- Article
Structural basis for substrate gripping and translocation by the ClpB AAA+ disaggregase.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-10150-y
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- Publication type:
- Article
Structure of the type VI secretion system TssK-TssF-TssG baseplate subcomplex revealed by cryo-electron microscopy.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07796-5
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- Publication type:
- Article
StarMap: a user-friendly workflow for Rosetta-driven molecular structure refinement.
- Published in:
- Nature Protocols, 2023, v. 18, n. 1, p. 239, doi. 10.1038/s41596-022-00757-9
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- Publication type:
- Article
Discovery and Characterization of Spike N‐Terminal Domain‐Binding Aptamers for Rapid SARS‐CoV‐2 Detection.
- Published in:
- Angewandte Chemie International Edition, 2021, v. 60, n. 39, p. 21211, doi. 10.1002/anie.202107730
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- Publication type:
- Article
Cryo‐electron Microscopy Imaging of Alzheimer's Amyloid‐beta 42 Oligomer Displayed on a Functionally and Structurally Relevant Scaffold.
- Published in:
- Angewandte Chemie International Edition, 2021, v. 60, n. 34, p. 18680, doi. 10.1002/anie.202104497
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- Publication type:
- Article
Electromechanical coupling mechanism for activation and inactivation of an HCN channel.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23062-7
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- Publication type:
- Article
Modeling Symmetric Macromolecular Structures in Rosetta3.
- Published in:
- PLoS ONE, 2011, v. 6, n. 6, p. 1, doi. 10.1371/journal.pone.0020450
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- Publication type:
- Article
Perturbing the energy landscape for improved packing during computational protein design.
- Published in:
- Proteins, 2021, v. 89, n. 4, p. 436, doi. 10.1002/prot.26030
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- Publication type:
- Article
Protein structure prediction using Rosetta in CASP12.
- Published in:
- Proteins, 2018, v. 86, n. 1, p. 113, doi. 10.1002/prot.25390
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- Publication type:
- Article
Automatic structure prediction of oligomeric assemblies using Robetta in CASP12.
- Published in:
- Proteins, 2018, v. 86, n. 1, p. 283, doi. 10.1002/prot.25387
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- Publication type:
- Article
Modeling oblong proteins and water-mediated interfaces with RosettaDock in CAPRI rounds 28-35.
- Published in:
- Proteins, 2017, v. 85, n. 3, p. 479, doi. 10.1002/prot.25168
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- Publication type:
- Article
Improved de novo structure prediction in CASP11 by incorporating coevolution information into Rosetta.
- Published in:
- Proteins, 2016, v. 84, p. 67, doi. 10.1002/prot.24974
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- Publication type:
- Article
CASP11 refinement experiments with ROSETTA.
- Published in:
- Proteins, 2016, v. 84, p. 314, doi. 10.1002/prot.24862
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- Publication type:
- Article
One contact for every twelve residues allows robust and accurate topology-level protein structure modeling.
- Published in:
- Proteins, 2014, v. 82, p. 208, doi. 10.1002/prot.24374
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- Publication type:
- Article
Structure prediction for CASP8 with all-atom refinement using Rosetta.
- Published in:
- Proteins, 2009, v. 77, n. S9, p. 89, doi. 10.1002/prot.22540
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- Publication type:
- Article
EMRinger: side chain-directed model and map validation for 3D cryo-electron microscopy.
- Published in:
- Nature Methods, 2015, v. 12, n. 10, p. 943, doi. 10.1038/nmeth.3541
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- Publication type:
- Article
De novo protein structure determination from near-atomic-resolution cryo-EM maps.
- Published in:
- Nature Methods, 2015, v. 12, n. 4, p. 335, doi. 10.1038/nmeth.3287
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- Publication type:
- Article
Atomic-accuracy models from 4.5-Å cryo-electron microscopy data with density-guided iterative local refinement.
- Published in:
- Nature Methods, 2015, v. 12, n. 4, p. 361, doi. 10.1038/nmeth.3286
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- Publication type:
- Article
Improved low-resolution crystallographic refinement with Phenix and Rosetta.
- Published in:
- Nature Methods, 2013, v. 10, n. 11, p. 1102, doi. 10.1038/nmeth.2648
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- Publication type:
- Article
Structure and lipid dynamics in the maintenance of lipid asymmetry inner membrane complex of A. baumannii.
- Published in:
- Communications Biology, 2021, v. 4, p. 1, doi. 10.1038/s42003-021-02318-4
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- Publication type:
- Article
Elucidating the 3D Structure of β-(1,3)-glucan Synthase from Candida glabrata by Subtomogram Averaging.
- Published in:
- 2022
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- Publication type:
- Abstract
Creating protein models from electron-density maps using particle-filtering methods.
- Published in:
- Bioinformatics, 2007, v. 23, n. 21, p. 2851, doi. 10.1093/bioinformatics/btm480
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- Publication type:
- Article
The cryo-EM structure of the bacterial flagellum cap complex suggests a molecular mechanism for filament elongation.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16981-4
- By:
- Publication type:
- Article