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Single cell transcriptomic analysis of HPV16-infected epithelium identifies a keratinocyte subpopulation implicated in cancer.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37377-0
By:
- Bedard, Mary C.;
- Chihanga, Tafadzwa;
- Carlile, Adrean;
- Jackson, Robert;
- Brusadelli, Marion G.;
- Lee, Denis;
- VonHandorf, Andrew;
- Rochman, Mark;
- Dexheimer, Phillip J.;
- Chalmers, Jeffrey;
- Nuovo, Gerard;
- Lehn, Maria;
- Williams, David E. J.;
- Kulkarni, Aditi;
- Carey, Molly;
- Jackson, Amanda;
- Billingsley, Caroline;
- Tang, Alice;
- Zender, Chad;
- Patil, Yash
Publication type:
Article
Pediatric Crohn disease patients exhibit specific ileal transcriptome and microbiome signature.
Published in:
Journal of Clinical Investigation, 2014, v. 124, n. 8, p. 3617, doi. 10.1172/JCI75436
By:
- Haberman, Yael;
- Tickle, Timothy L.;
- Dexheimer, Phillip J.;
- Mi-Ok Kim;
- Tang, Dora;
- Karns, Rebekah;
- Baldassano, Robert N.;
- Noe, Joshua D.;
- Rosh, Joel;
- Markowitz, James;
- Heyman, Melvin B.;
- Griffiths, Anne M.;
- Crandall, Wallace V.;
- Mack, David R.;
- Baker, Susan S.;
- Huttenhower, Curtis;
- Keljo, David J.;
- Hyams, Jeffrey S.;
- Kugathasan, Subra;
- Walters, Thomas D.
Publication type:
Article
Ulcerative colitis mucosal transcriptomes reveal mitochondriopathy and personalized mechanisms underlying disease severity and treatment response.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-07841-3
By:
- Haberman, Yael;
- Karns, Rebekah;
- Dexheimer, Phillip J.;
- Schirmer, Melanie;
- Somekh, Judith;
- Jurickova, Ingrid;
- Braun, Tzipi;
- Novak, Elizabeth;
- Bauman, Laura;
- Collins, Margaret H.;
- Mo, Angela;
- Rosen, Michael J.;
- Bonkowski, Erin;
- Gotman, Nathan;
- Marquis, Alison;
- Nistel, Mason;
- Rufo, Paul A.;
- Baker, Susan S.;
- Sauer, Cary G.;
- Markowitz, James
Publication type:
Article
Complementary RNA amplification methods enhance microarray identification of transcripts expressed in the C. elegans nervous system.
Published in:
BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-84
By:
- Watson, Joseph D.;
- Shenglong Wang;
- Von Stetina, Stephen E.;
- Spencer, W. Clay;
- Levy, Shawn;
- Dexheimer, Phillip J.;
- Kurn, Nurith;
- Heath, Joe Don;
- Miller III, David M.
Publication type:
Article
Characteristics of patients ≥10 years of age with diffuse intrinsic pontine glioma: a report from the International DIPG/DMG Registry.
Published in:
Neuro-Oncology, 2022, v. 24, n. 1, p. 141, doi. 10.1093/neuonc/noab140
By:
- Erker, Craig;
- Lane, Adam;
- Chaney, Brooklyn;
- Leary, Sarah;
- Minturn, Jane E;
- Bartels, Ute;
- Packer, Roger J;
- Dorris, Kathleen;
- Gottardo, Nicholas G;
- Warren, Katherine E;
- Broniscer, Alberto;
- Kieran, Mark W;
- Zhu, Xiaoting;
- White, Peter;
- Dexheimer, Phillip J;
- Black, Katie;
- Asher, Anthony;
- DeWire, Mariko;
- Hansford, Jordan R;
- Gururangan, Sridharan
Publication type:
Article
VExD: a curated resource for human gene expression alterations following viral infection.
Published in:
G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad176
By:
- Dexheimer, Phillip J.;
- Pujato, Mario;
- Roskin, Krishna M.;
- Weirauch, Matthew T.
Publication type:
Article
Increased Protein-Coding Mutations in the Mitochondrial Genome of African American Women With Preeclampsia.
Published in:
Reproductive Sciences, 2012, v. 19, n. 12, p. 1343, doi. 10.1177/1933719112450337
By:
- Ding, David;
- Scott, Nicole M.;
- Thompson, Emma E.;
- Chaiworapongsa, Tinnakorn;
- Torres, Raul;
- Billstrand, Christine;
- Murray, Kathleen;
- Dexheimer, Phillip J.;
- Ismail, Mahmoud;
- Kay, Helen;
- Levy, Shawn;
- Romero, Roberto;
- Lindheimer, Marshall D.;
- Nicolae, Dan L.;
- Ober, Carole
Publication type:
Article
NF1 patient missense variants predict a role for ATM in modifying neurofibroma initiation.
Published in:
Acta Neuropathologica, 2020, v. 139, n. 1, p. 157, doi. 10.1007/s00401-019-02086-w
By:
- Yu, Yanan;
- Choi, Kwangmin;
- Wu, Jianqiang;
- Andreassen, Paul R.;
- Dexheimer, Phillip J.;
- Keddache, Mehdi;
- Brems, Hilde;
- Spinner, Robert J.;
- Cancelas, Jose A.;
- Martin, Lisa J.;
- Wallace, Margaret R.;
- Legius, Eric;
- Vogel, Kristine S.;
- Ratner, Nancy
Publication type:
Article
Mucosal Inflammatory and Wound Healing Gene Programmes Reveal Targets for Stricturing Behaviour in Paediatric Crohn's Disease.
Published in:
Journal of Crohn's & Colitis, 2021, v. 15, n. 2, p. 273, doi. 10.1093/ecco-jcc/jjaa166
By:
- Haberman, Yael;
- Minar, Phillip;
- Karns, Rebekah;
- Dexheimer, Phillip J;
- Ghandikota, Sudhir;
- Tegge, Samuel;
- Shapiro, Daniel;
- Shuler, Brianne;
- Venkateswaran, Suresh;
- Braun, Tzipi;
- Ta, Allison;
- Walters, Thomas D;
- Baldassano, Robert N;
- Noe, Joshua D;
- Rosh, Joel;
- Markowitz, James;
- Dotson, Jennifer L;
- Mack, David R;
- Kellermayer, Richard;
- Griffiths, Anne M
Publication type:
Article
Vertical sleeve gastrectomy reduces hepatic steatosis while increasing serum bile acids in a weight-loss-independent manner.
Published in:
Obesity (19307381), 2014, v. 22, n. 2, p. 390, doi. 10.1002/oby.20548
By:
- Myronovych, Andriy;
- Kirby, Michelle;
- Ryan, Karen K.;
- Zhang, Wujuan;
- Jha, Pinky;
- Setchell, Kenneth DR.;
- Dexheimer, Phillip J.;
- Aronow, Bruce;
- Seeley, Randy J.;
- Kohli, Rohit
Publication type:
Article

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