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Circulating miRNA repertoire as a biomarker of metabolic and reproductive states in rainbow trout.
Published in:
BMC Biology, 2021, v. 19, n. 1, p. 1, doi. 10.1186/s12915-021-01163-5
By:
- Cardona, Emilie;
- Guyomar, Cervin;
- Desvignes, Thomas;
- Montfort, Jérôme;
- Guendouz, Samia;
- Postlethwait, John H.;
- Skiba-Cassy, Sandrine;
- Bobe, Julien
Publication type:
Article
Genomics of cold adaptations in the Antarctic notothenioid fish radiation.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38567-6
By:
- Bista, Iliana;
- Wood, Jonathan M. D.;
- Desvignes, Thomas;
- McCarthy, Shane A.;
- Matschiner, Michael;
- Ning, Zemin;
- Tracey, Alan;
- Torrance, James;
- Sims, Ying;
- Chow, William;
- Smith, Michelle;
- Oliver, Karen;
- Haggerty, Leanne;
- Salzburger, Walter;
- Postlethwait, John H.;
- Howe, Kerstin;
- Clark, Melody S.;
- William Detrich III, H.;
- Christina Cheng, C.-H.;
- Miska, Eric A.
Publication type:
Article
Nme Gene Family Evolutionary History Reveals Pre-Metazoan Origins and High Conservation between Humans and the Sea Anemone, Nematostella vectensis.
Published in:
PLoS ONE, 2010, v. 5, n. 11, p. 1, doi. 10.1371/journal.pone.0015506
By:
- Desvignes, Thomas;
- Pontarotti, Pierre;
- Bobe, Julien
Publication type:
Article
Biogeography of the Antarctic dragonfishes Acanthodraco dewitti and Psilodraco breviceps with re-description of Acanthodraco dewitti larvae (Notothenioidei: Bathydraconidae).
Published in:
Polar Biology, 2020, v. 43, n. 5, p. 565, doi. 10.1007/s00300-020-02661-y
By:
- Desvignes, Thomas;
- Postlethwait, John H.;
- Konstantinidis, Peter
Publication type:
Article
Characterization and husbandry of wild broodstock of the blackfin icefish Chaenocephalus aceratus (Lönnberg 1906) from the Palmer Archipelago (Southern Ocean) for breeding purposes.
Published in:
Polar Biology, 2017, v. 40, n. 12, p. 2499, doi. 10.1007/s00300-017-2161-9
By:
- Le François, Nathalie;
- Sheehan, Eileen;
- Detrich, H.;
- Desvignes, Thomas;
- Postlethwait, John;
- Belzile, Claude
Publication type:
Article
Influence of body size on tube feet morphology and attachment capacity in the sea urchin Holopneustes purpurascens (Temnopleuridae).
Published in:
Marine Biology, 2017, v. 164, n. 12, p. 1, doi. 10.1007/s00227-017-3270-2
By:
- Connolly, David;
- Desvignes, Thomas;
- Williamson, Jane
Publication type:
Article
Cold-Driven Hemoglobin Evolution in Antarctic Notothenioid Fishes Prior to Hemoglobin Gene Loss in White-Blooded Icefishes.
Published in:
Molecular Biology & Evolution, 2023, v. 40, n. 11, p. 1, doi. 10.1093/molbev/msad236
By:
- Desvignes, Thomas;
- Bista, Iliana;
- Herrera, Karina;
- Landes, Audrey;
- Postlethwait, John H
Publication type:
Article
FishmiRNA: An Evolutionarily Supported MicroRNA Annotation and Expression Database for Ray-Finned Fishes.
Published in:
Molecular Biology & Evolution, 2022, v. 39, n. 2, p. 1, doi. 10.1093/molbev/msac004
By:
- Desvignes, Thomas;
- Bardou, Philippe;
- Montfort, Jérôme;
- Sydes, Jason;
- Guyomar, Cervin;
- George, Simon;
- Postlethwait, John H;
- Bobe, Julien
Publication type:
Article
Evolution after Whole-Genome Duplication: Teleost MicroRNAs.
Published in:
Molecular Biology & Evolution, 2021, v. 38, n. 8, p. 3308, doi. 10.1093/molbev/msab105
By:
- Desvignes, Thomas;
- Sydes, Jason;
- Montfort, Jerôme;
- Bobe, Julien;
- Postlethwait, John H
Publication type:
Article
Developmental tuning of mineralization drives morphological diversity of gill cover bones in sculpins and their relatives.
Published in:
Evolution Letters, 2019, v. 3, n. 4, p. 374, doi. 10.1002/evl3.128
By:
- Cytrynbaum, Eli G.;
- Small, Clayton M.;
- Kwon, Ronald Y.;
- Hung, Boaz;
- Kent, Danny;
- Yan, Yi‐Lin;
- Knope, Matthew L.;
- Bremiller, Ruth A.;
- Desvignes, Thomas;
- Kimmel, Charles B.
Publication type:
Article
microRNA expression variation as a potential molecular mechanism contributing to adaptation to hydrogen sulphide.
Published in:
Journal of Evolutionary Biology, 2021, v. 34, n. 6, p. 977, doi. 10.1111/jeb.13727
By:
- Kelley, Joanna L.;
- Desvignes, Thomas;
- McGowan, Kerry L.;
- Perez, Marcos;
- Rodriguez, Lenin Arias;
- Brown, Anthony P.;
- Culumber, Zach;
- Tobler, Michael
Publication type:
Article
Adaptation of Proteins to the Cold in Antarctic Fish: A Role for Methionine?
Published in:
Genome Biology & Evolution, 2019, v. 11, n. 1, p. 220, doi. 10.1093/gbe/evy262
By:
- Berthelot, Camille;
- Clarke, Jane;
- Desvignes, Thomas;
- Detrich, H William;
- Flicek, Paul;
- Peck, Lloyd S;
- Peters, Michael;
- Postlethwait, John H;
- Clark, Melody S
Publication type:
Article
A new model army: Emerging fish models to study the genomics of vertebrate Evo-Devo.
Published in:
Journal of Experimental Zoology Part B: Molecular & Developmental Evolution, 2015, v. 324, n. 4, p. 316, doi. 10.1002/jez.b.22589
By:
- Braasch, Ingo;
- Peterson, Samuel M.;
- Desvignes, Thomas;
- McCluskey, Braedan M.;
- Batzel, Peter;
- Postlethwait, John H.
Publication type:
Article
Coordinated patterning of zebrafish caudal fin symmetry by a central and two peripheral organizers.
Published in:
Developmental Dynamics, 2022, v. 251, n. 8, p. 1306, doi. 10.1002/dvdy.475
By:
- Desvignes, Thomas;
- Robbins, Amy E.;
- Carey, Andrew Z.;
- Bailon‐Zambrano, Raisa;
- Nichols, James T.;
- Postlethwait, John H.;
- Stankunas, Kryn
Publication type:
Article
Evolution of caudal fin ray development and caudal fin hypural diastema complex in spotted gar, teleosts, and other neopterygian fishes.
Published in:
Developmental Dynamics, 2018, v. 247, n. 6, p. 832, doi. 10.1002/dvdy.24630
By:
- Desvignes, Thomas;
- Carey, Andrew;
- Postlethwait, John H.
Publication type:
Article
Evolution of Caudal Fin Ray Development and Caudal Fin Hypural Diastema Complex in Spotted Gar, Teleosts, and Other Neopterygian Fishes.
Published in:
Developmental Dynamics, 2018, v. 247, n. 6, p. 832, doi. 10.1002/DVDY.24630
By:
- Desvignes, Thomas;
- Carey, Andrew;
- Postlethwait, John H.
Publication type:
Article
Skeletal development in the heterocercal caudal fin of spotted gar (<italic>lepisosteus oculatus</italic>) and other lepisosteiformes.
Published in:
Developmental Dynamics, 2018, v. 247, n. 5, p. 724, doi. 10.1002/dvdy.24617
By:
- Desvignes, Thomas;
- Carey, Andrew;
- Braasch, Ingo;
- Enright, Trevor;
- Postlethwait, John H.
Publication type:
Article
Gonadal soma controls ovarian follicle proliferation through Gsdf in zebrafish.
Published in:
Developmental Dynamics, 2017, v. 246, n. 11, p. 925, doi. 10.1002/dvdy.24579
By:
- Yan, Yi‐Lin;
- Desvignes, Thomas;
- Bremiller, Ruth;
- Wilson, Catherine;
- Dillon, Danielle;
- High, Samantha;
- Draper, Bruce;
- Buck, Charles Loren;
- Postlethwait, John
Publication type:
Article
Embryogenesis and early skeletogenesis in the antarctic bullhead notothen, Notothenia coriiceps.
Published in:
Developmental Dynamics, 2016, v. 245, n. 11, p. 1066, doi. 10.1002/dvdy.24437
By:
- Postlethwait, John H.;
- Yan, Yi‐lin;
- Desvignes, Thomas;
- Allard, Corey;
- Titus, Tom;
- Le François, Nathalie R.;
- Detrich, H. William
Publication type:
Article
Correction: Hybridization barriers between the congeneric antarctic notothenioid fish Notothenia coriiceps and Notothenia rossii.
Published in:
2024
By:
- Desvignes, Thomas;
- Le François, Nathalie R.;
- Streeter, Margaret;
- Grondin, Jacob;
- Singer, Emily;
- Postlethwait, John H.;
- Detrich III, H. William
Publication type:
Correction Notice
Hybridization barriers between the congeneric antarctic notothenioid fish Notothenia coriiceps and Notothenia rossii.
Published in:
Polar Biology, 2024, v. 47, n. 2, p. 163, doi. 10.1007/s00300-023-03216-7
By:
- Desvignes, Thomas;
- Le François, Nathalie R.;
- Streeter, Margaret;
- Grondin, Jacob;
- Singer, Emily;
- Postlethwait, John H.;
- Detrich III, H. William
Publication type:
Article
A fish with no sex: gonadal and adrenal functions partition between zebrafish NR5A1 co-orthologs.
Published in:
Genetics, 2021, v. 217, n. 2, p. 1, doi. 10.1093/genetics/iyaa030
By:
- Yan, Yi-Lin;
- Titus, Tom;
- Desvignes, Thomas;
- BreMiller, Ruth;
- Batzel, Peter;
- Sydes, Jason;
- Farnsworth, Dylan;
- Dillon, Danielle;
- Wegner, Jeremy;
- Phillips, Jennifer B.;
- Peirce, Judy;
- Dowd, John;
- Network, Undiagnosed Diseases;
- Buck, Charles Loren;
- Miller, Adam;
- Westerfield, Monte;
- Postlethwait, John H.
Publication type:
Article
A Hormone That Lost Its Receptor: Anti-Müllerian Hormone (AMH) in Zebrafish Gonad Development and Sex Determination.
Published in:
Genetics, 2019, v. 213, n. 2, p. 529, doi. 10.1534/genetics.119.302365
By:
- Yi-Lin Yan;
- Batzel, Peter;
- Titus, Tom;
- Sydes, Jason;
- Desvignes, Thomas;
- BreMiller, Ruth;
- Draper, Bruce;
- Postlethwait, John H.
Publication type:
Article
Pathways to polar adaptation in fishes revealed by long‐read sequencing.
Published in:
Molecular Ecology, 2023, v. 32, n. 6, p. 1381, doi. 10.1111/mec.16501
By:
- Hotaling, Scott;
- Desvignes, Thomas;
- Sproul, John S.;
- Lins, Luana S. F.;
- Kelley, Joanna L.
Publication type:
Article
Bone microstructure and bone mineral density are not systemically different in Antarctic icefishes and related Antarctic notothenioids.
Published in:
Journal of Anatomy, 2022, v. 240, n. 1, p. 34, doi. 10.1111/joa.13537
By:
- Ashique, Amir M.;
- Atake, Oghenevwogaga J.;
- Ovens, Katie;
- Guo, Ruiyi;
- Pratt, Isaac V.;
- Detrich, H. William;
- Cooper, David M. L.;
- Desvignes, Thomas;
- Postlethwait, John H.;
- Eames, B. Frank
Publication type:
Article
Intergeneric hybrids inform reproductive isolating barriers in the Antarctic icefish radiation.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-42354-z
By:
- Desvignes, Thomas;
- Le François, Nathalie R.;
- Goetz, Laura C.;
- Smith, Sierra S.;
- Shusdock, Kathleen A.;
- Parker, Sandra K.;
- Postlethwait, John H.;
- Detrich, H. William
Publication type:
Article
miRNA analysis with Prost! reveals evolutionary conservation of organ-enriched expression and post-transcriptional modifications in three-spined stickleback and zebrafish.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-40361-8
By:
- Desvignes, Thomas;
- Batzel, Peter;
- Sydes, Jason;
- Eames, B. Frank;
- Postlethwait, John H.
Publication type:
Article
RADSex: A computational workflow to study sex determination using restriction site‐associated DNA sequencing data.
Published in:
Molecular Ecology Resources, 2021, v. 21, n. 5, p. 1715, doi. 10.1111/1755-0998.13360
By:
- Feron, Romain;
- Pan, Qiaowei;
- Wen, Ming;
- Imarazene, Boudjema;
- Jouanno, Elodie;
- Anderson, Jennifer;
- Herpin, Amaury;
- Journot, Laurent;
- Parrinello, Hugues;
- Klopp, Christophe;
- Kottler, Verena A.;
- Roco, Alvaro S.;
- Du, Kang;
- Kneitz, Susanne;
- Adolfi, Mateus;
- Wilson, Catherine A.;
- McCluskey, Braedan;
- Amores, Angel;
- Desvignes, Thomas;
- Goetz, Frederick W.
Publication type:
Article
Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API.
Published in:
Bioinformatics, 2020, v. 36, n. 3, p. 698, doi. 10.1093/bioinformatics/btz675
By:
- Desvignes, Thomas;
- Loher, Phillipe;
- Eilbeck, Karen;
- Ma, Jeffery;
- Urgese, Gianvito;
- Fromm, Bastian;
- Sydes, Jason;
- Aparicio-Puerta, Ernesto;
- Barrera, Victor;
- Espín, Roderic;
- Thibord, Florian;
- Ros, Xavier Bofill-De;
- Londin, Eric;
- Telonis, Aristeidis G;
- Ficarra, Elisa;
- Friedländer, Marc R;
- Postlethwait, John H;
- Rigoutsos, Isidore;
- Hackenberg, Michael;
- Vlachos, Ioannis S
Publication type:
Article

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