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Circulating miR-1246 Targeting UBE2C, TNNI3, TRAIP, UCHL1 Genes and Key Pathways as a Potential Biomarker for Lung Adenocarcinoma: Integrated Biological Network Analysis.
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- Journal of Personalized Medicine, 2020, v. 10, n. 4, p. 162, doi. 10.3390/jpm10040162
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- Article
Computational Method for Classification of Avian Influenza A Virus Using DNA Sequence Information and Physicochemical Properties.
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- Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.599321
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- Article
Prediction of Recombination Spots Using Novel Hybrid Feature Extraction Method via Deep Learning Approach.
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- Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.539227
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- Article
Gene expression profiles and protein-protein interaction networks in amyotrophic lateral sclerosis patients with C9orf72 mutation.
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- 2016
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- Publication type:
- journal article
Unveiling the Therapeutic Potential of Paclitaxel Combinations Against Breast Carcinoma and Identification of In Vivo Biomarkers.
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- Chemical Biology & Drug Design, 2024, v. 104, n. 3, p. 1, doi. 10.1111/cbdd.14627
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- Article
Structural and dynamic investigation of non‐synonymous variations in Renin–AGT complex revealed altered binding via hydrogen‐bonding network reprogramming to accelerate the hypertension pathway.
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- Chemical Biology & Drug Design, 2022, v. 100, n. 5, p. 730, doi. 10.1111/cbdd.14107
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- Article
ACPS: An accurate bioinformatics tool for precision‐based anti‐cancer peptide generation via omics data.
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- Chemical Biology & Drug Design, 2021, v. 97, n. 2, p. 372, doi. 10.1111/cbdd.13789
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- Article
Prediction and validation of potent peptides against herpes simplex virus type 1 via immunoinformatic and systems biology approach.
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- Chemical Biology & Drug Design, 2019, v. 94, n. 5, p. 1868, doi. 10.1111/cbdd.13602
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- Article
An unexpected dynamic binding mode between coagulation factor X and Rivaroxaban reveals importance of flexibility in drug binding.
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- Chemical Biology & Drug Design, 2019, v. 94, n. 3, p. 1664, doi. 10.1111/cbdd.13568
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- Article
Structure-Based Virtual Screening Reveals Ibrutinib and Zanubrutinib as Potential Repurposed Drugs against COVID-19.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 13, p. 7071, doi. 10.3390/ijms22137071
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- Article
An Integrated Pan-Cancer Analysis and Structure-Based Virtual Screening of GPR15.
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- International Journal of Molecular Sciences, 2019, v. 20, n. 24, p. 6226, doi. 10.3390/ijms20246226
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- Article
Prediction of Effective Drug Combinations by an Improved Naïve Bayesian Algorithm.
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- International Journal of Molecular Sciences, 2018, v. 19, n. 2, p. 467, doi. 10.3390/ijms19020467
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- Article
Discovery of Isojacareubin as a covalent inhibitor of SARS‐CoV‐2 main protease using structural and experimental approaches.
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- Journal of Medical Virology, 2023, v. 95, n. 2, p. 1, doi. 10.1002/jmv.28542
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- Article
Correction: Suleman et al. Immunoinformatics and Immunogenetics-Based Design of Immunogenic Peptides Vaccine against the Emerging Tick-Borne Encephalitis Virus (TBEV) and Its Validation through In Silico Cloning and Immune Simulation. Vaccines 2021, 9 , 1210
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- 2024
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- Publication type:
- Correction Notice
Annotation of Potential Vaccine Targets and Design of a Multi-Epitope Subunit Vaccine against Yersinia pestis through Reverse Vaccinology and Validation through an Agent-Based Modeling Approach.
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- Vaccines, 2021, v. 9, n. 11, p. 1327, doi. 10.3390/vaccines9111327
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- Publication type:
- Article
Immunoinformatics and Immunogenetics-Based Design of Immunogenic Peptides Vaccine against the Emerging Tick-Borne Encephalitis Virus (TBEV) and Its Validation through In Silico Cloning and Immune Simulation.
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- Vaccines, 2021, v. 9, n. 11, p. 1210, doi. 10.3390/vaccines9111210
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- Publication type:
- Article
SynBioEcoli: a comprehensive metabolism network of engineered E. coli in three dimensional visualization.
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- Quantitative Biology, 2017, v. 5, n. 1, p. 99, doi. 10.1007/s40484-017-0098-1
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- Article
A novel formulation of theranostic nanomedicine for targeting drug delivery to gastrointestinal tract cancer.
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- Cancer Nanotechnology (1868-6958), 2021, v. 12, n. 1, p. 1, doi. 10.1186/s12645-021-00098-4
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- Article
Designing of CD8<sup>+</sup> and CD8<sup>+</sup>-overlapped CD4<sup>+</sup> epitope vaccine by targeting late and early proteins of human papillomavirus.
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- Biologics: Targets & Therapy, 2018, v. 12, p. 107, doi. 10.2147/BTT.S177901
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- Article
Prediction of Type II Toxin-Antitoxin Loci in Klebsiella pneumoniae Genome Sequences.
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- Interdisciplinary Sciences: Computational Life Sciences, 2016, v. 8, n. 2, p. 143, doi. 10.1007/s12539-015-0135-6
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- Article
Improved feature-based prediction of SNPs in human cytochrome P450 enzymes.
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- Interdisciplinary Sciences: Computational Life Sciences, 2015, v. 7, n. 1, p. 65, doi. 10.1007/s12539-014-0257-2
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- Article
Investigating the stabilisation of IFN-α2a by replica exchange molecular dynamics simulation.
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- Journal of Molecular Modeling, 2022, v. 28, n. 8, p. 1, doi. 10.1007/s00894-022-05212-w
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- Article
Identification of novel acetylcholinesterase inhibitors through 3D-QSAR, molecular docking, and molecular dynamics simulation targeting Alzheimer's disease.
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- Journal of Molecular Modeling, 2021, v. 27, n. 10, p. 1, doi. 10.1007/s00894-021-04928-5
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- Article
Thermal decomposition of solid phase nitromethane under various heating rates and target temperatures based on ab initio molecular dynamics simulations.
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- Journal of Molecular Modeling, 2014, v. 20, n. 10, p. 1, doi. 10.1007/s00894-014-2438-7
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- Article
Evidence that the pituitary gland connects type 2 diabetes mellitus and schizophrenia based on large-scale trans-ethnic genetic analyses.
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- 2022
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- Publication type:
- journal article
Higher infectivity of the SARS‐CoV‐2 new variants is associated with K417N/T, E484K, and N501Y mutants: An insight from structural data.
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- Journal of Cellular Physiology, 2021, v. 236, n. 10, p. 7045, doi. 10.1002/jcp.30367
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- Article
DeepProSite: structure-aware protein binding site prediction using ESMFold and pretrained language model.
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- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad718
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- Article
Pan-Cancer Analysis and Drug Formulation for GPR139 and GPR142.
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- Frontiers in Pharmacology, 2021, v. 11, p. N.PAG, doi. 10.3389/fphar.2020.521245
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- Article
Identification of Human Disease Genes from Interactome Network Using Graphlet Interaction.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0086142
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- Article
Mutation probability of cytochrome P450 based on a genetic algorithm and support vector machine.
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- Biotechnology Journal, 2011, v. 6, n. 11, p. 1367, doi. 10.1002/biot.201000450
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- Article
An accurate feature-based method for identifying DNA-binding residues on protein surfaces.
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- Proteins, 2011, v. 79, n. 2, p. 509, doi. 10.1002/prot.22898
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- Article
Core-Proteomics-Based Annotation of Antigenic Targets and Reverse-Vaccinology-Assisted Design of Ensemble Immunogen against the Emerging Nosocomial Infection-Causing Bacterium Elizabethkingia meningoseptica.
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- International Journal of Environmental Research & Public Health, 2022, v. 19, n. 1, p. 194, doi. 10.3390/ijerph19010194
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- Article
Identification of Colocasia esculenta（L.） Schott var. Lipu Taro leaf blight disease causal pathogen and its protoplasts preparation.
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- Journal of Southern Agriculture, 2016, v. 47, n. 11, p. 1861, doi. 10.3969/j：issn.2095-1191.2016.11.1861
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- Article
The Reaction and Microscopic Electron Properties from Dynamic Evolutions of Condensed-Phase RDX Under Shock Loading.
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- Zeitschrift für Naturforschung Section A: A Journal of Physical Sciences, 2020, v. 75, n. 4, p. 285, doi. 10.1515/zna-2019-0379
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- Article
Enhancer-LSTMAtt: A Bi-LSTM and Attention-Based Deep Learning Method for Enhancer Recognition.
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- Biomolecules (2218-273X), 2022, v. 12, n. 7, p. N.PAG, doi. 10.3390/biom12070995
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- Publication type:
- Article
Remdesivir MD Simulations Suggest a More Favourable Binding to SARS-CoV-2 RNA Dependent RNA Polymerase Mutant P323L Than Wild-Type.
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- Biomolecules (2218-273X), 2021, v. 11, n. 7, p. 919, doi. 10.3390/biom11070919
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- Article
Integrated PPI- and WGCNA-Retrieval of Hub Gene Signatures Shared Between Barrett's Esophagus and Esophageal Adenocarcinoma.
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- Frontiers in Pharmacology, 2020, v. 11, p. N.PAG, doi. 10.3389/fphar.2020.00881
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- Article
ATC-NLSP: Prediction of the Classes of Anatomical Therapeutic Chemicals Using a Network-Based Label Space Partition Method.
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- Frontiers in Pharmacology, 2019, p. 1, doi. 10.3389/fphar.2019.00971
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- Article
Exploring the Binding Mechanism of NRG1–ERBB3 Complex and Discovery of Potent Natural Products to Reduce Diabetes-Assisted Breast Cancer Progression.
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- Interdisciplinary Sciences: Computational Life Sciences, 2023, v. 15, n. 3, p. 452, doi. 10.1007/s12539-023-00566-y
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- Publication type:
- Article
Utilization of Deep Convolutional Neural Networks for Accurate Chest X-Ray Diagnosis and Disease Detection.
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- Interdisciplinary Sciences: Computational Life Sciences, 2023, v. 15, n. 3, p. 374, doi. 10.1007/s12539-023-00562-2
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- Publication type:
- Article
In Silico Mutagenesis-Based Remodelling of SARS-CoV-1 Peptide (ATLQAIAS) to Inhibit SARS-CoV-2: Structural-Dynamics and Free Energy Calculations.
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- Interdisciplinary Sciences: Computational Life Sciences, 2021, v. 13, n. 3, p. 521, doi. 10.1007/s12539-021-00447-2
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- Publication type:
- Article
Are the Allergic Reactions of COVID-19 Vaccines Caused by mRNA Constructs or Nanocarriers? Immunological Insights.
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- Interdisciplinary Sciences: Computational Life Sciences, 2021, v. 13, n. 2, p. 344, doi. 10.1007/s12539-021-00438-3
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- Article
Hantavirus: The Next Pandemic We Are Waiting For?
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- Interdisciplinary Sciences: Computational Life Sciences, 2021, v. 13, n. 1, p. 147, doi. 10.1007/s12539-020-00413-4
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- Article
Phylogenetic Analysis and Structural Perspectives of RNA-Dependent RNA-Polymerase Inhibition from SARs-CoV-2 with Natural Products.
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- Interdisciplinary Sciences: Computational Life Sciences, 2020, v. 12, n. 3, p. 335, doi. 10.1007/s12539-020-00381-9
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- Article
An Integrated Systems Biology and Network-Based Approaches to Identify Novel Biomarkers in Breast Cancer Cell Lines Using Gene Expression Data.
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- Interdisciplinary Sciences: Computational Life Sciences, 2020, v. 12, n. 2, p. 155, doi. 10.1007/s12539-020-00360-0
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- Article
CytoMegaloVirus Infection Database: A Public Omics Database for Systematic and Comparable Information of CMV.
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- Interdisciplinary Sciences: Computational Life Sciences, 2020, v. 12, n. 2, p. 169, doi. 10.1007/s12539-019-00350-x
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- Article
Estimation of Probability Distribution and Its Application in Bayesian Classification and Maximum Likelihood Regression.
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- Interdisciplinary Sciences: Computational Life Sciences, 2019, v. 11, n. 3, p. 559, doi. 10.1007/s12539-019-00343-w
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- Publication type:
- Article
Protection of Primary Dopaminergic Midbrain Neurons Through Impact of Small Molecules Using Virtual Screening of GPR139 Supported by Molecular Dynamic Simulation and Systems Biology.
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- Interdisciplinary Sciences: Computational Life Sciences, 2019, v. 11, n. 2, p. 247, doi. 10.1007/s12539-019-00334-x
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- Article
Detoxification of aflatoxins on prospective approach: effect on structural, mechanical, and optical properties under pressures.
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- Interdisciplinary Sciences: Computational Life Sciences, 2018, v. 10, n. 2, p. 311, doi. 10.1007/s12539-017-0278-8
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- Article
Rare Diseases: Drug Discovery and Informatics Resource.
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- Interdisciplinary Sciences: Computational Life Sciences, 2018, v. 10, n. 1, p. 195, doi. 10.1007/s12539-017-0270-3
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- Publication type:
- Article