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Optimizing methods and dodging pitfalls in microbiome research.
- Published in:
- Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0267-5
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- Publication type:
- Article
Effects of Mask Reuse on the Oropharyngeal, Skin, and Mask Microbiome.
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- Journal of Infectious Diseases, 2023, v. 228, n. 4, p. 479, doi. 10.1093/infdis/jiad167
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- Publication type:
- Article
Cytomegalovirus Latent Infection is Associated with an Increased Risk of COVID-19-Related Hospitalization.
- Published in:
- Journal of Infectious Diseases, 2022, v. 226, n. 3, p. 463, doi. 10.1093/infdis/jiac020
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- Publication type:
- Article
The Lung Allograft Microbiome Associates with Pepsin, Inflammation, and Primary Graft Dysfunction.
- Published in:
- American Journal of Respiratory & Critical Care Medicine, 2022, v. 206, n. 12, p. 1508, doi. 10.1164/rccm.202112-2786OC
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- Publication type:
- Article
Supraphysiologic control over HIV-1 replication mediated by CD8 T cells expressing a re-engineered CD4-based chimeric antigen receptor.
- Published in:
- PLoS Pathogens, 2017, v. 13, n. 10, p. 1, doi. 10.1371/journal.ppat.1006613
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- Publication type:
- Article
4167 Peri-transplant Lung Microbiome Reveal Oral Bacteria, Pepsin And Inflammatory Markers Co-associate With Primary Graft Dysfunction, Implicating Aspiration As A Potential Contributor.
- Published in:
- 2020
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- Publication type:
- Abstract
Upper Respiratory Dysbiosis with a Facultative-dominated Ecotype in Advanced Lung Disease and Dynamic Change after Lung Transplant.
- Published in:
- 2019
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- Publication type:
- journal article
Application of "Omics" and Systems Biology to Sarcoidosis Research.
- Published in:
- 2017
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- Publication type:
- journal article
Rationale and Design of the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis (GRADS) Study. Sarcoidosis Protocol.
- Published in:
- 2015
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- Publication type:
- journal article
Administration of nucleoside-modified mRNA encoding broadly neutralizing antibody protects humanized mice from HIV-1 challenge.
- Published in:
- Nature Communications, 2017, v. 8, n. 3, p. 14630, doi. 10.1038/ncomms14630
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- Publication type:
- Article
CD4 Depletion in SIV-Infected Macaques Results in Macrophage and Microglia Infection with Rapid Turnover of Infected Cells.
- Published in:
- PLoS Pathogens, 2014, v. 10, n. 10, p. 1, doi. 10.1371/journal.ppat.1004467
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- Publication type:
- Article
Target Cell Availability, Rather than Breast Milk Factors, Dictates Mother-to-Infant Transmission of SIV in Sooty Mangabeys and Rhesus Macaques.
- Published in:
- PLoS Pathogens, 2014, v. 10, n. 3, p. 1, doi. 10.1371/journal.ppat.1003958
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- Publication type:
- Article
Decreased plasticity of coreceptor use by CD4-independent SIV Envs that emerge in vivo.
- Published in:
- Retrovirology, 2013, v. 10, n. 1, p. 1, doi. 10.1186/1742-4690-10-133
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- Publication type:
- Article
Dynamic Changes in the Nasal Microbiome Associated With Disease Activity in Patients With Granulomatosis With Polyangiitis.
- Published in:
- Arthritis & Rheumatology, 2021, v. 73, n. 9, p. 1703, doi. 10.1002/art.41723
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- Publication type:
- Article
Tracking gut microbiome and bloodstream infection in critically ill adults.
- Published in:
- PLoS ONE, 2023, v. 18, n. 10, p. 1, doi. 10.1371/journal.pone.0289923
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- Publication type:
- Article
Viruses, periodontitis, and comorbidities.
- Published in:
- 2022
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- Publication type:
- journal article
Effect of CCR2 and CCR5 variants on HIV disease.
- Published in:
- JAMA: Journal of the American Medical Association, 1997, v. 278, n. 23, p. 2113, doi. 10.1001/jama.1997.03550230089046
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- Publication type:
- Article
Assessing Bacterial Populations in the Lung by Replicate Analysis of Samples from the Upper and Lower Respiratory Tracts.
- Published in:
- PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0042786
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- Publication type:
- Article
Disordered Microbial Communities in the Upper Respiratory Tract of Cigarette Smokers.
- Published in:
- PLoS ONE, 2010, v. 5, n. 12, p. 1, doi. 10.1371/journal.pone.0015216
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- Publication type:
- Article
CCR5 Genotypes in Sexually Active Couples Discordant for Human Immunodeficiency Virus Type 1 Infection Status.
- Published in:
- Journal of Infectious Diseases, 1997, v. 176, n. 4, p. 1093
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- Publication type:
- Article
R5X4 HIV-1 coreceptor use in primary target cells: implications for coreceptor entry blocking strategies.
- Published in:
- 2011
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- Publication type:
- journal article
R5X4 HIV-1 coreceptor use in primary target cells: implications for coreceptor entry blocking strategies.
- Published in:
- Journal of Translational Medicine, 2010, p. 1, doi. 10.1186/1479-5876-9-S1-S3
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- Publication type:
- Article
Evaluation of a therapy for Idiopathic Chronic Enterocolitis in rhesus macaques (Macaca mulatta) and linked microbial community correlates.
- Published in:
- PeerJ, 2018, p. 1, doi. 10.7717/peerj.4612
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- Publication type:
- Article
Composition and dynamics of the respiratory tract microbiome in intubated patients.
- Published in:
- Microbiome, 2016, v. 4, p. 1, doi. 10.1186/s40168-016-0151-8
- By:
- Publication type:
- Article
Detection of Microbial Agents in Oropharyngeal and Nasopharyngeal Samples of SARS-CoV-2 Patients.
- Published in:
- Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.637202
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- Publication type:
- Article
Bidirectional Associations among Nicotine and Tobacco Smoke, NeuroHIV, and Antiretroviral Therapy.
- Published in:
- Journal of NeuroImmune Pharmacology, 2020, v. 15, n. 4, p. 694, doi. 10.1007/s11481-019-09897-4
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- Publication type:
- Article
The Upper Airway Microbiome and Lung Injury in COVID-19.
- Published in:
- 2021
- By:
- Publication type:
- Editorial
Of Mice and Men . . . and Microbes: Conclusions and Cautions from a Murine Study of the Lung Microbiome and Microbiome-Immune Interactions.
- Published in:
- 2018
- By:
- Publication type:
- editorial
Microbial Lineages in Sarcoidosis. A Metagenomic Analysis Tailored for Low-Microbial Content Samples.
- Published in:
- 2018
- By:
- Publication type:
- journal article
Multicenter Comparison of Lung and Oral Microbiomes of HIV-infected and HIV-uninfected Individuals.
- Published in:
- 2015
- By:
- Publication type:
- journal article
The lung microbiome in idiopathic pulmonary fibrosis. What does it mean and what should we do about it?
- Published in:
- 2014
- By:
- Publication type:
- editorial
The Lung Microbiome in Idiopathic Pulmonary Fibrosis.
- Published in:
- American Journal of Respiratory & Critical Care Medicine, 2014, v. 190, n. 8, p. 850, doi. 10.1164/rccm.201409-1626ed
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- Publication type:
- Article
The role of the lung microbiome in health and disease. A National Heart, Lung, and Blood Institute workshop report.
- Published in:
- 2013
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- Publication type:
- journal article
Lung-enriched Organisms and Aberrant Bacterial and Fungal Respiratory Microbiota after Lung Transplant.
- Published in:
- American Journal of Respiratory & Critical Care Medicine, 2012, v. 186, n. 6, p. 536, doi. 10.1164/rccm.201204-0693OC
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- Publication type:
- Article
Topographical Continuity of Bacterial Populations in the Healthy Human Respiratory Tract.
- Published in:
- American Journal of Respiratory & Critical Care Medicine, 2011, v. 184, n. 8, p. 957, doi. 10.1164/rccm.201104-0655OC
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- Publication type:
- Article
Bayesian community-wide culture-independent microbial source tracking.
- Published in:
- Nature Methods, 2011, v. 8, n. 9, p. 761, doi. 10.1038/nmeth.1650
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- Publication type:
- Article
Erratum: Longer hospital stay is associated with high rates of tuberculosis-related morbidity and mortality within 12 months after discharge in a referral hospital in Sub-Saharan Africa.
- Published in:
- BMC Infectious Diseases, 2015, v. 15, n. 1, p. 211, doi. 10.1186/s12879-015-0942-8
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- Publication type:
- Article
Longer hospital stay is associated with higher rates of tuberculosis-related morbidity and mortality within 12 months after discharge in a referral hospital in Sub-Saharan Africa.
- Published in:
- BMC Infectious Diseases, 2014, v. 14, n. 1, p. 409, doi. 10.1186/1471-2334-14-409
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- Publication type:
- Article
The lung microbiome: progress and promise.
- Published in:
- 2021
- By:
- Publication type:
- journal article
Depletion of CD4⁺ T cells abrogates post-peak decline of viremia in SIV-infected rhesus macaques.
- Published in:
- 2011
- By:
- Publication type:
- journal article
Innate lymphoid cells promote lung-tissue homeostasis after infection with influenza virus.
- Published in:
- Nature Immunology, 2011, v. 12, n. 11, p. 1045, doi. 10.1038/ni.2131
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- Publication type:
- Article
Detection of SARS-CoV-2 RNA using RTLAMP and molecular beacons.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02387-y
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- Publication type:
- Article
T cell dynamics and response of the microbiota after gene therapy to treat X-linked severe combined immunodeficiency.
- Published in:
- Genome Medicine, 2018, v. 10, n. 1, p. N.PAG, doi. 10.1186/s13073-018-0580-z
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- Publication type:
- Article
Femtomolar SARS-CoV-2 Antigen Detection Using the Microbubbling Digital Assay with Smartphone Readout Enables Antigen Burden Quantitation and Tracking.
- Published in:
- Clinical Chemistry, 2022, v. 68, n. 1, p. 230, doi. 10.1093/clinchem/hvab158
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- Publication type:
- Article
Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA.
- Published in:
- Bioinformatics, 2015, v. 31, n. 15, p. 2461, doi. 10.1093/bioinformatics/btv183
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- Publication type:
- Article
Associating microbiome composition with environmental covariates using generalized UniFrac distances.
- Published in:
- Bioinformatics, 2012, v. 28, n. 16, p. 2106, doi. 10.1093/bioinformatics/bts342
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- Publication type:
- Article
Molecular analysis of the endobronchial stent microbial biofilm reveals bacterial communities that associate with stent material and frequent fungal constituents.
- Published in:
- PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0217306
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- Publication type:
- Article
Highly restricted SARS‐CoV‐2 receptor expression and resistance to infection by primary human monocytes and monocyte‐derived macrophages.
- Published in:
- Journal of Leukocyte Biology, 2022, v. 112, n. 3, p. 569, doi. 10.1002/JLB.4COVA1121-579RR
- By:
- Publication type:
- Article
Low levels of SIV infection in sooty mangabey central memory CD4<sup>+</sup> T cells are associated with limited CCR5 expression.
- Published in:
- Nature Medicine, 2011, v. 17, n. 7, p. 830, doi. 10.1038/nm.2395
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- Publication type:
- Article
Corrigendum: siRNA-directed inhibition of HIV-1 infection.
- Published in:
- 2003
- By:
- Publication type:
- Correction notice