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From acute to persistent infection: revealing phylogenomic variations in Salmonella Agona.
Published in:
PLoS Pathogens, 2024, v. 20, n. 10, p. 1, doi. 10.1371/journal.ppat.1012679
By:
- Waters, Emma V.;
- Lee, Winnie W. Y.;
- Ismail Ahmed, Amina;
- Chattaway, Marie-Anne;
- Langridge, Gemma C.
Publication type:
Article
Development and validation of a random forest algorithm for source attribution of animal and human Salmonella Typhimurium and monophasic variants of S. Typhimurium isolates in England and Wales utilising whole genome sequencing data.
Published in:
Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2023.1254860
By:
- Guzinski, Jaromir;
- Tang, Yue;
- Chattaway, Marie Anne;
- Dallman, Timothy J.;
- Petrovska, Liljana
Publication type:
Article
An investigation of the presence and antimicrobial susceptibility of Enterobacteriaceae in raw and cooked kibble diets for dogs in the United Kingdom.
Published in:
Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2023.1301841
By:
- Morgan, Genever;
- Pinchbeck, Gina;
- Taymaz, Eda;
- Chattaway, Marie Anne;
- Schmidt, Vanessa;
- Williams, Nicola
Publication type:
Article
Fluoroquinolone-Resistant Enteric Bacteria in Sub-Saharan Africa: Clones, Implications and Research Needs.
Published in:
Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00558
By:
- Chattaway, Marie A.;
- Aboderin, Aaron O.;
- Fashae, Kayode;
- Okoro, Chinyere K.;
- Opintan, Japheth A.;
- Okeke, Iruka N.
Publication type:
Article
A One Health Perspective on Salmonella enterica Serovar Infantis, an Emerging Human Multidrug-Resistant Pathogen.
Published in:
Emerging Infectious Diseases, 2024, v. 30, n. 4, p. 701, doi. 10.3201/eid3004.231031
By:
- Mattock, Jennifer;
- Chattaway, Marie Anne;
- Hartman, Hassan;
- Dallman, Timothy J.;
- Smith, Anthony M.;
- Keddy, Karen;
- Petrovska, Liljana;
- Manners, Emma J.;
- Duze, Sanelisiwe T.;
- Smouse, Shannon;
- Tau, Nomsa;
- Timme, Ruth;
- Baker, Dave J.;
- Mather, Alison E.;
- Wain, John;
- Langridge, Gemma C.
Publication type:
Article
Case of Carbapenem-Resistant Salmonella Typhi Infection, Pakistan, 2022.
Published in:
Emerging Infectious Diseases, 2023, v. 29, n. 11, p. 2395, doi. 10.3201/eid2911.230499
By:
- Nizamuddin, Summiya;
- Khan, Ejaz Ahmed;
- Chattaway, Marie Anne;
- Godbole, Gauri
Publication type:
Article
ESBL-Producing and Macrolide-Resistant Shigella sonnei Infections among Men Who Have Sex with Men, England, 2015.
Published in:
2016
By:
- Mook, Piers;
- McCormick, Jacquelyn;
- Bains, Manpreet;
- Cowley, Lauren A.;
- Chattaway, Marie A.;
- Jenkins, Claire;
- Mikhail, Amy;
- Hughes, Gwenda;
- Elson, Richard;
- Day, Martin;
- Manuel, Rohini;
- Dave, Jayshree;
- Field, Nigel;
- Godbole, Gauri;
- Dallman, Timothy;
- Crook, Paul
Publication type:
journal article
Two Linked Enteroinvasive Escherichia coli Outbreaks, Nottingham, UK, June 2014.
Published in:
2016
By:
- Newitt, Sophie;
- MacGregor, Vanessa;
- Robbins, Vivienne;
- Bayliss, Laura;
- Chattaway, Marie Anne;
- Dallman, Tim;
- Ready, Derren;
- Aird, Heather;
- Puleston, Richard;
- Hawker, Jeremy
Publication type:
journal article
Evidence of Evolving Extraintestinal Enteroaggregative Escherichia coli ST38 Clone.
Published in:
Emerging Infectious Diseases, 2014, v. 20, n. 11, p. 1935, doi. 10.3201/eid2011.131845
By:
- Chattaway, Marie Anne;
- Jenkins, Claire;
- Ciesielczuk, Holly;
- Day, Martin;
- DoNascimento, Vivienne;
- Day, Michaela;
- Rodríguez, Irene;
- Essen-Zandbergen, Alieda van;
- Schink, Anne-Kathrin;
- Wu, Guanghui;
- Threlfall, John;
- Woodward, Martin J.;
- Coldham, Nick;
- Kadlec, Kristina;
- Schwarz, Stefan;
- Dierikx, Cindy;
- Guerra, Beatriz;
- Helmuth, Reiner;
- Mevius, Dik;
- Woodford, Neil
Publication type:
Article
Redefining enteroaggregative Escherichia coli (EAEC): Genomic characterization of epidemiological EAEC strains.
Published in:
PLoS Neglected Tropical Diseases, 2020, v. 14, n. 9, p. 1, doi. 10.1371/journal.pntd.0008613
By:
- Boisen, Nadia;
- Østerlund, Mark T.;
- Joensen, Katrine G.;
- Santiago, Araceli E.;
- Mandomando, Inacio;
- Cravioto, Alejandro;
- Chattaway, Marie A.;
- Gonyar, Laura A.;
- Overballe-Petersen, Søren;
- Stine, O. Colin;
- Rasko, David A.;
- Scheutz, Flemming;
- Nataro, James P.
Publication type:
Article
Isolation of Salmonella species of public health concern from commonly fed dried meat dog treats.
Published in:
Veterinary Record: Journal of the British Veterinary Association, 2023, v. 192, n. 7, p. 1, doi. 10.1002/vetr.2642
By:
- Morgan, Genever;
- Saal, Mikhela;
- Corr, Aoife;
- Jenkins, Claire;
- Chattaway, Marie Anne;
- Pinchbeck, Gina;
- Williams, Nicola
Publication type:
Article
Emergence of Multidrug-Resistant Escherichia coli Producing CTX-M, MCR-1, and FosA in Retail Food From Egypt.
Published in:
Frontiers in Cellular & Infection Microbiology, 2021, v. 11, p. 1, doi. 10.3389/fcimb.2021.681588
By:
- Ramadan, Hazem;
- Soliman, Ahmed M.;
- Hiott, Lari M.;
- Elbediwi, Mohammed;
- Woodley, Tiffanie A.;
- Chattaway, Marie A.;
- Jenkins, Claire;
- Frye, Jonathan G.;
- Jackson, Charlene R.
Publication type:
Article
A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38902-x
By:
- Cuypers, Wim L.;
- Meysman, Pieter;
- Weill, François-Xavier;
- Hendriksen, Rene S.;
- Beyene, Getenet;
- Wain, John;
- Nair, Satheesh;
- Chattaway, Marie A.;
- Perez-Sepulveda, Blanca M.;
- Ceyssens, Pieter-Jan;
- de Block, Tessa;
- Lee, Winnie W. Y.;
- Pardos de la Gandara, Maria;
- Kornschober, Christian;
- Moran-Gilad, Jacob;
- Veldman, Kees T.;
- Cormican, Martin;
- Torpdahl, Mia;
- Fields, Patricia I.;
- Černý, Tomáš
Publication type:
Article
Enteroaggregative Escherichia coli Have Evolved Independently as Distinct Complexes within the E. coli Population with Varying Ability to Cause Disease.
Published in:
PLoS ONE, 2014, v. 9, n. 11, p. 1, doi. 10.1371/journal.pone.0112967
By:
- Chattaway, Marie Anne;
- Jenkins, Claire;
- Rajendram, Dunstan;
- Cravioto, Alejandro;
- Talukder, Kaisar Ali;
- Dallman, Tim;
- Underwood, Anthony;
- Platt, Steve;
- Okeke, Iruka N.;
- Wain, John
Publication type:
Article
An Investigation of the Diversity of Strains of Enteroaggregative <i>Escherichia coli</i> Isolated from Cases Associated with a Large Multi-Pathogen Foodborne Outbreak in the UK.
Published in:
PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0098103
By:
- Dallman, Timothy J.;
- Chattaway, Marie A.;
- Cowley, Lauren A.;
- Doumith, Michel;
- Tewolde, Rediat;
- Wooldridge, David J.;
- Underwood, Anthony;
- Ready, Derren;
- Wain, John;
- Foster, Kirsty;
- Grant, Kathie A.;
- Jenkins, Claire
Publication type:
Article
Vaccination and established microbiological testing is essential in managing cholera and Ebola infection.
Published in:
Journal of Infection in Developing Countries, 2015, v. 9, n. 6, p. 682, doi. 10.3855/jidc.7158
By:
- Chattaway, Marie Anne;
- Grant, Kathie;
- Connell, Steve;
- Kamara, Abdul;
- Jambai, Amara;
- Alemu, Wondimagegnehu;
- Salter, Mark
Publication type:
Article
Establishing an enteric bacteria reference laboratory in Sierra Leone.
Published in:
Journal of Infection in Developing Countries, 2014, v. 8, n. 7, p. 933, doi. 10.3855/jidc.5074
By:
- Chattaway, Marie Anne;
- Kamara, Abdul;
- Rhodes, Fay;
- Kaffeta, Konneh;
- Jambai, Amara;
- Alemu, Wondimagegnehu;
- Islam, Mohammed Sirajul;
- Freeman, Molly M.;
- Welfare, William;
- Harding, Doris;
- Samba, Ahmed F.;
- Abu, Musu;
- Kamanda, Sylvester;
- Grant, Kathie;
- Jenkins, Claire;
- Nair, Satheesh;
- Connell, Steve;
- Siorvanes, Lisa;
- Desai, Sarika;
- Allen, Collette
Publication type:
Article
Enteroaggregative E. coli O104 from an outbreak of HUS in Germany 2011, could it happen again?
Published in:
Journal of Infection in Developing Countries, 2011, v. 5, n. 6, p. 425, doi. 10.3855/jidc.2166
By:
- Chattaway, Marie Anne;
- Dallman, Tim;
- Okeke, Iruke N.;
- Wain, John
Publication type:
Article
Application of prophage sequence analysis to investigate a disease outbreak involving Salmonella Adjame, a rare serovar and implications for the population structure.
Published in:
Frontiers in Microbiology, 2023, v. 14, p. 1, doi. 10.3389/fmicb.2023.1086198
By:
- Ruimin Gao;
- Duceppe, Marc-Olivier;
- Chattaway, Marie Anne;
- Goodridge, Lawrence;
- Ogunremi, Dele
Publication type:
Article
Identification and characterisation of enteroaggregative Escherichia coli subtypes associated with human disease.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-64424-3
By:
- Ellis, Samuel J.;
- Crossman, Lisa C.;
- McGrath, Conor J.;
- Chattaway, Marie A.;
- Hölken, Johanna M.;
- Brett, Bernard;
- Bundy, Leah;
- Kay, Gemma L.;
- Wain, John;
- Schüller, Stephanie
Publication type:
Article
Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers.
Published in:
PLoS Neglected Tropical Diseases, 2019, v. 13, n. 9, p. 1, doi. 10.1371/journal.pntd.0007620
By:
- Ingle, Danielle J.;
- Nair, Satheesh;
- Hartman, Hassan;
- Ashton, Philip M.;
- Dyson, Zoe A.;
- Day, Martin;
- Freedman, Joanne;
- Chattaway, Marie A.;
- Holt, Kathryn E.;
- Dallman, Timothy J.
Publication type:
Article
Emergence of phylogenetically diverse and fluoroquinolone resistant Salmonella Enteritidis as a cause of invasive nontyphoidal Salmonella disease in Ghana.
Published in:
PLoS Neglected Tropical Diseases, 2019, v. 13, n. 6, p. 1, doi. 10.1371/journal.pntd.0007485
By:
- Aldrich, Cassandra;
- Hartman, Hassan;
- Feasey, Nicholas;
- Chattaway, Marie Anne;
- Dekker, Denise;
- Al-Emran, Hassan M.;
- Larkin, Lesley;
- McCormick, Jacquelyn;
- Sarpong, Nimako;
- Le Hello, Simon;
- Adu-Sarkodie, Yaw;
- Panzner, Ursula;
- Park, Se Eun;
- Im, Justin;
- Marks, Florian;
- May, Jürgen;
- Dallman, Timothy J.;
- Eibach, Daniel
Publication type:
Article
Genomic surveillance detects Salmonella enterica serovar Paratyphi A harbouring bla<sub>CTX-M-15</sub> from a traveller returning from Bangladesh.
Published in:
PLoS ONE, 2020, v. 15, n. 1, p. 1, doi. 10.1371/journal.pone.0228250
By:
- Nair, Satheesh;
- Day, Martin;
- Godbole, Gauri;
- Saluja, Tranprit;
- Langridge, Gemma C.;
- Dallman, Timothy J.;
- Chattaway, Marie
Publication type:
Article
The origins of haplotype 58 (H58) Salmonella enterica serovar Typhi.
Published in:
Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06451-8
By:
- Carey, Megan E.;
- Thi Nguyen, To Nguyen;
- Tran, Do Hoang Nhu;
- Dyson, Zoe A.;
- Keane, Jacqueline A.;
- Pham Thanh, Duy;
- Mylona, Elli;
- Nair, Satheesh;
- Chattaway, Marie;
- Baker, Stephen
Publication type:
Article
Evaluation of Genomic Typing Methods in the Salmonella Reference Laboratory in Public Health, England, 2012–2020.
Published in:
Pathogens, 2023, v. 12, n. 2, p. 223, doi. 10.3390/pathogens12020223
By:
- Chattaway, Marie Anne;
- Painset, Anaïs;
- Godbole, Gauri;
- Gharbia, Saheer;
- Jenkins, Claire
Publication type:
Article
First Report of CTX-M-15 Salmonella Typhi From England.
Published in:
2018
By:
- Godbole, Gauri S;
- Day, Martin R;
- Murthy, Saraswathi;
- Chattaway, Marie A;
- Nair, Satheesh
Publication type:
Case Study
Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes.
Published in:
eLife, 2023, p. 1, doi. 10.7554/eLife.85867
By:
- Carey, Megan E.;
- Dyson, Zoe A.;
- Ingle, Danielle J.;
- Amir, Afreenish;
- Aworh, Mabel K.;
- Chattaway, Marie Anne;
- Ka Lip Chew;
- Crump, John A.;
- Feasey, Nicholas A.;
- Howden, Benjamin P.;
- Keddy, Karen H.;
- Maes, Mailis;
- Parry, Christopher M.;
- Van Puyvelde, Sandra;
- Webb, Hattie E.;
- Afolayan, Ayorinde Oluwatobiloba;
- Alexander, Anna P.;
- Anandan, Shalini;
- Andrews, Jason R.;
- Ashton, Philip M.
Publication type:
Article
Rapid geographical source attribution of Salmonella enterica serovar Enteritidis genomes using hierarchical machine learning.
Published in:
eLife, 2023, p. 1, doi. 10.7554/eLife.84167
By:
- Bayliss, Sion C.;
- Locke, Rebecca K.;
- Jenkins, Claire;
- Chattaway, Marie Anne;
- Dallman, Timothy J.;
- Cowley, Lauren A.
Publication type:
Article
Salmonella nomenclature in the genomic era: a time for change.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-86243-w
By:
- Chattaway, Marie A.;
- Langridge, Gemma C.;
- Wain, John
Publication type:
Article
Whole-Genome Sequencing for National Surveillance of Shigella flexneri.
Published in:
Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01700
By:
- Chattaway, Marie A.;
- Greig, David R.;
- Gentle, Amy;
- Hartman, Hassan B.;
- Dallman, Timothy J.;
- Jenkins, Claire
Publication type:
Article
Isolation and characterisation of Vibrio cholerae from fish examined postmortem at ZSL London Zoo between 2014 and 2018.
Published in:
Veterinary Record: Journal of the British Veterinary Association, 2020, v. 187, n. 10, p. 1, doi. 10.1136/vr.105682
By:
- Flach, Edmund J.;
- LeNette-Dawson, Demi;
- Greig, David R.;
- Ahmed, Amina Ismail;
- Jenkins, Claire;
- John, Shinto K.;
- Macgregor, Shaheed K.;
- Masters, Nic;
- Stidworthy, Mark F.;
- Zimmerman, Brian;
- Chattaway, Marie A.
Publication type:
Article
The microbiological quality of flour products in the UK with respect to Salmonella and Shiga-toxin-producing Escherichia coli.
Published in:
Journal of Applied Microbiology, 2024, v. 135, n. 7, p. 1, doi. 10.1093/jambio/lxae183
By:
- Kesby, Michelle;
- Jorgensen, Frieda;
- Willis, Caroline;
- Aird, Heather;
- Lai, Sandra;
- Sadler-Reeves, Lorraine;
- Jenkins, Claire;
- Chattaway, Marie
Publication type:
Article
A survey of Salmonella, Escherichia coli, and antimicrobial resistance in frozen, part-cooked, breaded, or battered chicken products on retail sale in the UK.
Published in:
Journal of Applied Microbiology, 2023, v. 134, n. 5, p. 1, doi. 10.1093/jambio/lxad093
By:
- Willis, Caroline;
- Jørgensen, Frieda;
- Cawthraw, Shaun;
- Aird, Heather;
- Lai, Sandra;
- Kesby, Michelle;
- Chattaway, Marie;
- Lock, Ioana;
- Quill, Emiline;
- Raykova, Gabriela
Publication type:
Article
Whole genome sequencing reveals antimicrobial resistance determinants (AMR genes) of Salmonella enterica recovered from raw chicken and ready‐to‐eat leaves imported into England between 2014 and 2019.
Published in:
Journal of Applied Microbiology, 2022, v. 133, n. 4, p. 2569, doi. 10.1111/jam.15728
By:
- Davies, Nicola;
- Jørgensen, Frieda;
- Willis, Caroline;
- McLauchlin, Jim;
- Chattaway, Marie Anne
Publication type:
Article
A narrative review of wastewater surveillance: pathogens of concern, applications, detection methods, and challenges.
Published in:
Frontiers in Public Health, 2024, p. 1, doi. 10.3389/fpubh.2024.1445961
By:
- Singh, Surabhi;
- Ahmed, Amina Ismail;
- Almansoori, Sumayya;
- Alameri, Shaikha;
- Adlan, Ashraf;
- Odivilas, Giovanni;
- Chattaway, Marie Anne;
- Bin Salem, Samara;
- Brudecki, Grzegorz;
- Elamin, Wael
Publication type:
Article
Whole Genome Sequencing for Public Health Surveillance of Shiga Toxin-Producing Escherichia coli Other than Serogroup O157.
Published in:
Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00258
By:
- Chattaway, Marie A.;
- Dallman, Timothy J.;
- Gentle, Amy;
- Wright, Michael J.;
- Long, Sophie E.;
- Ashton, Philip M.;
- Perry, Neil T.;
- Jenkins, Claire
Publication type:
Article
Invasive shigellosis in MSM.
Published in:
2016
By:
- Serafino Wani, Robert L.;
- Filson, Sarah A.;
- Chattaway, Marie A.;
- Godbole, Gauri
Publication type:
journal article
Dynamics of Salmonella enterica and antimicrobial resistance in the Brazilian poultry industry and global impacts on public health.
Published in:
PLoS Genetics, 2022, v. 18, n. 6, p. 1, doi. 10.1371/journal.pgen.1010174
By:
- Alikhan, Nabil-Fareed;
- Moreno, Luisa Zanolli;
- Castellanos, Luis Ricardo;
- Chattaway, Marie Anne;
- McLauchlin, Jim;
- Lodge, Martin;
- O'Grady, Justin;
- Zamudio, Roxana;
- Doughty, Emma;
- Petrovska, Liljana;
- Cunha, Marcos Paulo Vieira;
- Knöbl, Terezinha;
- Moreno, Andrea Micke;
- Mather, Alison E.
Publication type:
Article
Linking epidemiological and genomic data in cases of enteric fever in England to inform clinical management and public health action.
Published in:
Journal of Antimicrobial Chemotherapy (JAC), 2024, v. 79, n. 8, p. 1811, doi. 10.1093/jac/dkae148
By:
- Buczkowska, Matylda;
- Chattaway, Marie A;
- Jenkins, Claire;
- Hungerford, Daniel;
- Katwa, Parisha;
- Kirkbride, Hilary;
- Hawker, Jeremy
Publication type:
Article
ESBL-producing strains isolated from imported cases of enteric fever in England and Wales reveal multiple chromosomal integrations of blaCTX-M-15 in XDR Salmonella Typhi.
Published in:
2021
By:
- Nair, Satheesh;
- Chattaway, Marie;
- Langridge, Gemma C;
- Gentle, Amy;
- Day, Martin;
- Ainsworth, Emma V;
- Mohamed, Iman;
- Smith, Robert;
- Jenkins, Claire;
- Dallman, Timothy J;
- Godbole, Gauri
Publication type:
journal article
Comparison of phenotypic and WGS-derived antimicrobial resistance profiles of Shigella sonnei isolated from cases of diarrhoeal disease in England and Wales, 2015.
Published in:
2017
By:
- Sadouki, Zahra;
- Day, Martin R.;
- Doumith, Michel;
- Chattaway, Marie A.;
- Dallman, Timothy J.;
- Hopkins, Katie L.;
- Elson, Richard;
- Woodford, Neil;
- Godbole, Gauri;
- Jenkins, Claire
Publication type:
journal article
Diversity of STs, plasmids and ESBL genes among Escherichia coli from humans, animals and food in Germany, the Netherlands and the UK.
Published in:
2016
By:
- Day, Michaela J.;
- Rodríguez, Irene;
- van Essen-Zandbergen, Alieda;
- Dierikx, Cindy;
- Kadlec, Kristina;
- Schink, Anne-Kathrin;
- Guanghui Wu;
- Chattaway, Marie A.;
- DoNascimento, Vivienne;
- Wain, John;
- Helmuth, Reiner;
- Guerra, Beatriz;
- Schwarz, Stefan;
- Threlfall, John;
- Woodward, Martin J.;
- Coldham, Nick;
- Mevius, Dik;
- Woodford, Neil;
- Wu, Guanghui
Publication type:
journal article
Genomic analysis of Anderson typing phages of Salmonella Typhimrium: towards understanding the basis of bacteria-phage interaction.
Published in:
Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-37307-6
By:
- Mohammed, Manal;
- Casjens, Sherwood R.;
- Millard, Andrew D.;
- Harrison, Christian;
- Gannon, Lucy;
- Chattaway, Marie Anne
Publication type:
Article

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