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ELM: the status of the 2010 eukaryotic linear motif resource.
Published in:
Nucleic Acids Research, 2010, v. 38, p. D167, doi. 10.1093/nar/gkp1016
By:
- Gould, Cathryn M.;
- Diella, Francesca;
- Via, Allegra;
- Puntervoll, Pål;
- Gemünd, Christine;
- Chabanis-Davidson, Sophie;
- Michael, Sushama;
- Sayadi, Ahmed;
- Bryne, Jan Christian;
- Chica, Claudia;
- Seiler, Markus;
- Davey, Norman E.;
- Haslam, Niall;
- Weatheritt, Robert J.;
- Budd, Aidan;
- Hughes, Tim;
- Paś, Jakub;
- Rychlewski, Leszek;
- Travé, Gilles;
- Aasland, Rein
Publication type:
Article
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update.
Published in:
Nucleic Acids Research, 2008, v. 36, p. D102
By:
- Bryne, Jan Christian;
- Valen, Eivind;
- Tang, Man-Hung Eric;
- Marstrand, Troels;
- Winther, Ole;
- da Piedade, Isabelle;
- Krogh, Anders;
- Lenhard, Boris;
- Sandelin, Albin
Publication type:
Article
The Regulatory Landscape of Osteogenic Differentiation.
Published in:
Stem Cells, 2014, v. 32, n. 10, p. 2780, doi. 10.1002/stem.1759
By:
- Håkelien, Anne-Mari;
- Bryne, Jan Christian;
- Harstad, Kristine G.;
- Lorenz, Susanne;
- Paulsen, Jonas;
- Sun, Jinchang;
- Mikkelsen, Tarjei S.;
- Myklebost, Ola;
- Meza-Zepeda, Leonardo A.
Publication type:
Article
Sox2 cooperates with Chd7 to regulate genes that are mutated in human syndromes.
Published in:
Nature Genetics, 2011, v. 43, n. 6, p. 607, doi. 10.1038/ng.825
By:
- Engelen, Erik;
- Akinci, Umut;
- Bryne, Jan Christian;
- Hou, Jun;
- Gontan, Cristina;
- Moen, Maaike;
- Szumska, Dorota;
- Kockx, Christel;
- van IJcken, Wilfred;
- Dekkers, Dick H. W.;
- Demmers, Jeroen;
- Rijkers, Erik-Jan;
- Bhattacharya, Shoumo;
- Philipsen, Sjaak;
- Pevny, Larysa H.;
- Grosveld, Frank G.;
- Rottier, Robbert J.;
- Lenhard, Boris;
- Poot, Raymond A.
Publication type:
Article
Dynamic long-range chromatin interactions control Myb proto-oncogene transcription during erythroid development.
Published in:
EMBO Journal, 2012, v. 31, n. 4, p. 986, doi. 10.1038/emboj.2011.450
By:
- Stadhouders, Ralph;
- Thongjuea, Supat;
- Andrieu-Soler, Charlotte;
- Palstra, Robert-Jan;
- Bryne, Jan Christian;
- van den Heuvel, Anita;
- Stevens, Mary;
- de Boer, Ernie;
- Kockx, Christel;
- van der Sloot, Antoine;
- van den Hout, Mirjam;
- van IJcken, Wilfred;
- Eick, Dirk;
- Lenhard, Boris;
- Grosveld, Frank;
- Soler, Eric
Publication type:
Article
The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner.
Published in:
Epigenetics & Chromatin, 2012, v. 5, n. 1, p. 8, doi. 10.1186/1756-8935-5-8
By:
- Sleutels, Frank;
- Soochit, Widia;
- Bartkuhn, Marek;
- Heath, Helen;
- Dienstbach, Sven;
- Bergmaier, Philipp;
- Franke, Vedran;
- Rosa-Garrido, Manuel;
- van de Nobelen, Suzanne;
- Caesar, Lisa;
- van der Reijden, Michael;
- Bryne, Jan Christian;
- van Ucken, Wilfred;
- Grootegoe, J Anton;
- Delgado, M Dolores;
- Lenhard, Boris;
- Renkawitz, Rainer;
- Grosveld, Frank;
- Galjart, Niels
Publication type:
Article
Genome-wide map of quantified epigenetic changes during in vitro chondrogenic differentiation of primary human mesenchymal stem cells.
Published in:
BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-105
By:
- Herlofsen, Sarah R.;
- Bryne, Jan Christian;
- Høiby, Torill;
- Li Wang;
- Issner, Robbyn;
- Xiaolan Zhang;
- Coyne, Michael J.;
- Boyle, Patrick;
- Hongcang Gu;
- Meza-Zepeda, Leonardo A.;
- Collas, Philippe;
- Mikkelsen, Tarjei S.;
- Brinchmann, Jan E.
Publication type:
Article
BioXSD: the common data-exchange format for everyday bioinformatics web services.
Published in:
Bioinformatics, 2010, v. 26, n. 18, p. i540, doi. 10.1093/bioinformatics/btq391
By:
- Kalaš, Matúš;
- Puntervoll, Pål;
- Joseph, Alexandre;
- Bartaševičiūtė, Edita;
- Töpfer, Armin;
- Venkataraman, Prabakar;
- Pettifer, Steve;
- Bryne, Jan Christian;
- Ison, Jon;
- Blanchet, Christophe;
- Rapacki, Kristoffer;
- Jonassen, Inge
Publication type:
Article

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