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The prolyl isomerase FKBP25 regulates microtubule polymerization impacting cell cycle progression and genomic stability.
Published in:
Nucleic Acids Research, 2018, v. 46, n. 5, p. 2459, doi. 10.1093/nar/gky008
By:
- Dilworth, David;
- Gudavicius, Geoff;
- Xu, Xiaoxue;
- Boyce, Andrew K J;
- O'Sullivan, Connor;
- Serpa, Jason J;
- Bilenky, Misha;
- Petrochenko, Evgeniy V;
- Borchers, Christoph H;
- Hirst, Martin
Publication type:
Article
Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing.
Published in:
Nature Methods, 2007, v. 4, n. 8, p. 651, doi. 10.1038/nmeth1068
By:
- Robertson, Gordon;
- Hirst, Martin;
- Bainbridge, Matthew;
- Bilenky, Misha;
- Yongjun Zhao;
- Zeng, Thomas;
- Euskirchen, Ghia;
- Bernier, Bridget;
- Varhol, Richard;
- Delaney, Allen;
- Thiessen, Nina;
- Griffith, Obi L;
- He, Ann;
- Marra, Marco;
- Snyder, Michael;
- Jones, Steven
Publication type:
Article
Meis1 establishes the pre-hemogenic endothelial state prior to Runx1 expression.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40283-0
By:
- Coulombe, Patrick;
- Cole, Grace;
- Fentiman, Amanda;
- Parker, Jeremy D. K.;
- Yung, Eric;
- Bilenky, Misha;
- Degefie, Lemlem;
- Lac, Patrick;
- Ling, Maggie Y. M.;
- Tam, Derek;
- Humphries, R. Keith;
- Karsan, Aly
Publication type:
Article
Vitamin C induces specific demethylation of H3K9me2 in mouse embryonic stem cells via Kdm3a/b.
Published in:
Epigenetics & Chromatin, 2017, v. 10, p. 1, doi. 10.1186/s13072-017-0143-3
By:
- Ebata, Kevin T.;
- Mesh, Kathryn;
- Shichong Liu;
- Bilenky, Misha;
- Fekete, Alexander;
- Acker, Michael G.;
- Hirst, Martin;
- Garcia, Benjamin A.;
- Ramalho-Santos, Miguel
Publication type:
Article
Epigenetic and transcriptional determinants of the human breast.
Published in:
Nature Communications, 2015, v. 6, n. 2, p. 6351, doi. 10.1038/ncomms7351
By:
- Gascard, Philippe;
- Bilenky, Misha;
- Sigaroudinia, Mahvash;
- Zhao, Jianxin;
- Li, Luolan;
- Carles, Annaick;
- Delaney, Allen;
- Tam, Angela;
- Kamoh, Baljit;
- Cho, Stephanie;
- Griffith, Malachi;
- Chu, Andy;
- Robertson, Gordon;
- Cheung, Dorothy;
- Li, Irene;
- Heravi-Moussavi, Alireza;
- Moksa, Michelle;
- Mingay, Matthew;
- Hussainkhel, Angela;
- Davis, Brad
Publication type:
Article
Intermediate DNA methylation is a conserved signature of genome regulation.
Published in:
Nature Communications, 2015, v. 6, n. 2, p. 6363, doi. 10.1038/ncomms7363
By:
- Elliott, GiNell;
- Hong, Chibo;
- Xing, Xiaoyun;
- Zhou, Xin;
- Li, Daofeng;
- Coarfa, Cristian;
- Bell, Robert J.A.;
- Maire, Cecile L.;
- Ligon, Keith L.;
- Sigaroudinia, Mahvash;
- Gascard, Philippe;
- Tlsty, Thea D.;
- Harris, R. Alan;
- Schalkwyk, Leonard C.;
- Bilenky, Misha;
- Mill, Jonathan;
- Farnham, Peggy J.;
- Kellis, Manolis;
- Marra, Marco A.;
- Milosavljevic, Aleksandar
Publication type:
Article
Regulatory network decoded from epigenomes of surface ectoderm-derived cell types.
Published in:
Nature Communications, 2014, v. 5, n. 11, p. 5442, doi. 10.1038/ncomms6442
By:
- Lowdon, Rebecca F.;
- Zhang, Bo;
- Bilenky, Misha;
- Mauro, Thea;
- Li, Daofeng;
- Gascard, Philippe;
- Sigaroudinia, Mahvash;
- Farnham, Peggy J.;
- Bastian, Boris C.;
- Tlsty, Thea D.;
- Marra, Marco A.;
- Hirst, Martin;
- Costello, Joseph F.;
- Wang, Ting;
- Cheng, Jeffrey B.
Publication type:
Article
Distinct DNA methylation patterns associated with treatment resistance in metastatic castration resistant prostate cancer.
Published in:
Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-85812-3
By:
- Peter, Madonna R.;
- Bilenky, Misha;
- Davies, Alastair;
- Isserlin, Ruth;
- Bader, Gary D.;
- Fleshner, Neil E.;
- Hirst, Martin;
- Zoubeidi, Amina;
- Bapat, Bharati
Publication type:
Article
Integrative analysis of 111 reference human epigenomes.
Published in:
Nature, 2015, v. 518, n. 7539, p. 317, doi. 10.1038/nature14248
By:
- Roadmap Epigenomics Consortium;
- Kundaje, Anshul;
- Meuleman, Wouter;
- Ernst, Jason;
- Bilenky, Misha;
- Yen, Angela;
- Heravi-Moussavi, Alireza;
- Kheradpour, Pouya;
- Zhang, Zhizhuo;
- Wang, Jianrong;
- Ziller, Michael J.;
- Amin, Viren;
- Whitaker, John W.;
- Schultz, Matthew D.;
- Ward, Lucas D.;
- Sarkar, Abhishek;
- Quon, Gerald;
- Sandstrom, Richard S.;
- Eaton, Matthew L.;
- Wu, Yi-Chieh
Publication type:
Article
Histone Chaperone Paralogs Have Redundant, Cooperative, and Divergent Functions in Yeast.
Published in:
Genetics, 2019, v. 213, n. 4, p. 1301, doi. 10.1534/genetics.119.302235
By:
- Savic, Neda;
- Shortill, Shawn P.;
- Bilenky, Misha;
- Dobbs, Joseph M.;
- Dilworth, David;
- Hirst, Martin;
- Nelson, Christopher J.
Publication type:
Article
Retrotransposon-Induced Heterochromatin Spreading in the Mouse Revealed by Insertional Polymorphisms.
Published in:
PLoS Genetics, 2011, v. 7, n. 9, p. 1, doi. 10.1371/journal.pgen.1002301
By:
- Rebollo, Rita;
- Karimi, Mohammad M.;
- Bilenky, Misha;
- Gagnier, Liane;
- Miceli-Royer, Katharine;
- Zhang, Ying;
- Goyal, Preeti;
- Keane, Thomas M.;
- Jones, Steven;
- Hirst, Martin;
- Lorincz, Matthew C.;
- Mager, Dixie L.
Publication type:
Article
CRIS: complete reconstruction of immunoglobulin V-D-J sequences from RNA-seq data.
Published in:
Bioinformatics Advances, 2021, v. 1, n. 1, p. 1, doi. 10.1093/bioadv/vbab021
By:
- Islam, Rashedul;
- Bilenky, Misha;
- Weng, Andrew P.;
- Connors, Joseph M.;
- Hirst, Martin
Publication type:
Article

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