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Identifying mRNA targets of microRNA dystegulated in cancer: with application to clean cell Renal Cell Carcinoma.
Published in:
BMC Systems Biology, 2010, v. 4, p. 51, doi. 10.1186/1752-0509-4-51
By:
- Huiqing Liu;
- Brannon, Angela R.;
- Reddy, Anupama R.;
- Alexe, Gabriela;
- Seiler, Michael W.;
- Arreola, Alexandra;
- Oza, Jay H.;
- Ming Yao;
- Juan, David;
- Liou, Louis S.;
- Ganesan, Shridar;
- Levine, Arnold J.;
- Rathmell, W. K.;
- Bhanot, Gyan V.
Publication type:
Article
Glutaminase 2 is a novel negative regulator of small GTPase Rac1 and mediates p53 function in suppressing metastasis.
Published in:
eLife, 2016, p. 1, doi. 10.7554/eLife.10727
By:
- Cen Zhang;
- Juan Liu;
- Yuhan Zhao;
- Xuetian Yue;
- Yu Zhu;
- Xiaolong Wang;
- Hao Wu;
- Blanco, Felix;
- Shaohua Li;
- Gyan Bhanot;
- Haffty, Bruce G.;
- Wenwei Hu;
- Zhaohui Feng
Publication type:
Article
Correspondence.
Published in:
International Journal of High Performance Computing Applications, 1992, v. 6, n. 4, p. 383, doi. 10.1177/109434209200600407
By:
- Wholey, Skef;
- Lasser, Clifford;
- Bhanot, Gyan
Publication type:
Article
Bird to Human Transmission Biases and Vaccine Escape Mutants in H5N1 Infections.
Published in:
PLoS ONE, 2014, v. 9, n. 7, p. 1, doi. 10.1371/journal.pone.0100754
By:
- Wagh, Kshitij;
- Bhatia, Aatish;
- Greenbaum, Benjamin D.;
- Bhanot, Gyan
Publication type:
Article
Sporulation Genes Associated with Sporulation Efficiency in Natural Isolates of Yeast.
Published in:
PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069765
By:
- Tomar, Parul;
- Bhatia, Aatish;
- Ramdas, Shweta;
- Diao, Liyang;
- Bhanot, Gyan;
- Sinha, Himanshu
Publication type:
Article
Lactase Persistence and Lipid Pathway Selection in the Maasai.
Published in:
PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0044751
By:
- Wagh, Kshitij;
- Bhatia, Aatish;
- Alexe, Gabriela;
- Reddy, Anupama;
- Ravikumar, Vijay;
- Seiler, Michael;
- Boemo, Michael;
- Yao, Ming;
- Cronk, Lee;
- Naqvi, Asad;
- Ganesan, Shridar;
- Levine, Arnold J.;
- Bhanot, Gyan;
- Johnson, Norman
Publication type:
Article
Automated Reconstruction Algorithm for Identification of 3D Architectures of Cribriform Ductal Carcinoma In Situ.
Published in:
PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0044011
By:
- Norton, Kerri-Ann;
- Namazi, Sameera;
- Barnard, Nicola;
- Fujibayashi, Mariko;
- Bhanot, Gyan;
- Ganesan, Shridar;
- Iyatomi, Hitoshi;
- Ogawa, Koichi;
- Shinbrot, Troy;
- van Diest, Paul
Publication type:
Article
Amplified Loci on Chromosomes 8 and 17 Predict Early Relapse in ER-Positive Breast Cancers.
Published in:
PLoS ONE, 2012, v. 7, n. 6, p. 1, doi. 10.1371/journal.pone.0038575
By:
- Bilal, Erhan;
- Vassallo, Kristen;
- Toppmeyer, Deborah;
- Barnard, Nicola;
- Rye, Inga H.;
- Almendro, Vanessa;
- Russnes, Hege;
- Børresen-Dale, Anne-Lise;
- Levine, Arnold J.;
- Bhanot, Gyan;
- Ganesan, Shridar
Publication type:
Article
Single Cell Profiling of Circulating Tumor Cells: Transcriptional Heterogeneity and Diversity from Breast Cancer Cell Lines.
Published in:
PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0033788
By:
- Powell, Ashley A.;
- H.^Talasaz, AmirAli;
- Zhang, Haiyu;
- Coram, Marc A.;
- Reddy, Anupama;
- Deng, Glenn;
- Telli, Melinda L.;
- Advani, Ranjana H.;
- Carlson, Robert W.;
- Mollick, Joseph A.;
- Sheth, Shruti;
- Kurian, Allison W.;
- Ford, James M.;
- Stockdale, Frank E.;
- Quake, Stephen R.;
- Pease, R. Fabian;
- Mindrinos, Michael N.;
- Bhanot, Gyan;
- Dairkee, Shanaz H.;
- Davis, RonaldW.
Publication type:
Article
Age-Dependent Sex Bias in Clinical Malarial Disease in Hypoendemic Regions.
Published in:
PLoS ONE, 2012, v. 7, n. 4, p. 1, doi. 10.1371/journal.pone.0035592
By:
- Pathak, Sulabha;
- Rege, Mayuri;
- Gogtay, Nithya J.;
- Aigal, Umesh;
- Sharma, Surya Kant;
- Valecha, Neena;
- Bhanot, Gyan;
- Kshirsagar, Nilima A.;
- Sharma, Shobhona
Publication type:
Article
ErbB2, EphrinB1, Src Kinase and PTPN13 Signaling Complex Regulates MAP Kinase Signaling in Human Cancers.
Published in:
PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0030447
By:
- Vermeer, Paola D.;
- Bell, Megan;
- Lee, Kimberly;
- Vermeer, Daniel W.;
- Wieking, Byrant G.;
- Bilal, Erhan;
- Bhanot, Gyan;
- Drapkin, Ronny I.;
- Ganesan, Shridar;
- Klingelhutz, Aloysius J.;
- Hendriks, Wiljan J.;
- Lee, John H.
Publication type:
Article
Mitochondrial DNA Haplogroup D4a Is a Marker for Extreme Longevity in Japan.
Published in:
PLoS ONE, 2008, v. 3, n. 6, p. 1, doi. 10.1371/journal.pone.0002421
By:
- Bilal, Erhan;
- Rabadan, Raul;
- Alexe, Gabriela;
- Fuku, Noriyuki;
- Ueno, Hitomi;
- Nishigaki, Yutaka;
- Fujita, Yasunori;
- Ito, Masafumi;
- Arai, Yasumichi;
- Hirose, Nobuyoshi;
- Ruckenstein, Andrei;
- Bhanot, Gyan;
- Tanaka, Masashi
Publication type:
Article
A robust meta-classification strategy for cancer detection from MS data.
Published in:
Proteomics, 2006, v. 6, n. 2, p. 592, doi. 10.1002/pmic.200500192
By:
- Gyan Bhanot;
- Gabriela Alexe;
- Babu Venkataraghavan;
- Arnold J Levine
Publication type:
Article
Enrichment of longevity phenotype in mtDNA haplogroups D4b2b, D4a, and D5 in the Japanese population.
Published in:
Human Genetics, 2007, v. 121, n. 3/4, p. 347, doi. 10.1007/s00439-007-0330-6
By:
- Alexe, Gabriela;
- Fuku, Noriyuki;
- Bilal, Erhan;
- Ueno, Hitomi;
- Nishigaki, Yutaka;
- Fujita, Yasunori;
- Ito, Masafumi;
- Arai, Yasumichi;
- Hirose, Nobuyoshi;
- Bhanot, Gyan;
- Tanaka, Masashi
Publication type:
Article
Dynamical Analysis of a Degenerate Primary and Secondary Humoral Immune Response
Published in:
Bulletin of Mathematical Biology, 2003, v. 65, n. 3, p. 535, doi. 10.1016/S0092-8240(03)00023-5
By:
- Louzoun, Yoram;
- Weigert, Martin;
- Bhanot, Gyan
Publication type:
Article
Gene Expression in Barrett's Esophagus Cell Lines Resemble Esophageal Squamous Cell Carcinoma Instead of Esophageal Adenocarcinoma.
Published in:
Cancers, 2021, v. 13, n. 23, p. 5971, doi. 10.3390/cancers13235971
By:
- Panda, Anshuman;
- Bhanot, Gyan;
- Ganesan, Shridar;
- Bajpai, Manisha
Publication type:
Article
The transmission of SARS-CoV-2 is likely comodulated by temperature and by relative humidity.
Published in:
PLoS ONE, 2021, v. 16, n. 7, p. 1, doi. 10.1371/journal.pone.0255212
By:
- Raines, Kevin S.;
- Doniach, Sebastian;
- Bhanot, Gyan
Publication type:
Article
Using Cluster Analysis to Group Countries for Cost-effectiveness Analysis: An Application to Sub-Saharan Africa.
Published in:
Medical Decision Making, 2018, v. 38, n. 2, p. 139, doi. 10.1177/0272989X17724773
By:
- Russell, Louise B.;
- Bhanot, Gyan;
- Kim, Sun-Young;
- Sinha, Anushua
Publication type:
Article
Patterns of Evolution and Host Gene Mimicry in Influenza and Other RNA Viruses.
Published in:
PLoS Pathogens, 2008, v. 4, n. 6, p. 1, doi. 10.1371/journal.ppat.1000079
By:
- Greenbaum, Benjamin D.;
- Levine, Arnold J.;
- Bhanot, Gyan;
- Rabadan, Raul
Publication type:
Article
Endogenous retroviral signatures predict immunotherapy response in clear cell renal cell carcinoma.
Published in:
2018
By:
- Smith, Christof C.;
- Beckermann, Kathryn E.;
- Bortone, Dante S.;
- De Cubas, Aguirre A.;
- Bixby, Lisa M.;
- Lee, Samuel J.;
- Panda, Anshuman;
- Ganesan, Shridar;
- Bhanot, Gyan;
- Wallen, Eric M.;
- Milowsky, Matthew I.;
- Kim, William Y.;
- Rathmell, W. Kimryn;
- Swanstrom, Ronald;
- Parker, Joel S.;
- Serody, Jonathan S.;
- Selitsky, Sara R.;
- Vincent, Benjamin G.
Publication type:
journal article
Immune activation and response to pembrolizumab in POLE-mutant endometrial cancer.
Published in:
2016
By:
- Mehnert, Janice M.;
- Panda, Anshuman;
- Hua Zhong;
- Kim Hirshfield;
- Damare, Sherri;
- Lane, Katherine;
- Sokol, Levi;
- Stein, Mark N.;
- Rodriguez-Rodriquez, Lorna;
- Kaufman, Howard L.;
- Ali, Siraj;
- Ross, Jeffrey S.;
- Pavlick, Dean C.;
- Bhanot, Gyan;
- White, Eileen P.;
- DiPaola, Robert S.;
- Lovell, Ann;
- Cheng, Jonathan;
- Ganesan, Shridar;
- Zhong, Hua
Publication type:
journal article
The Modular Adaptive Ribosome.
Published in:
PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0166021
By:
- Yadav, Anupama;
- Radhakrishnan, Aparna;
- Panda, Anshuman;
- Singh, Amartya;
- Sinha, Himanshu;
- Bhanot, Gyan
Publication type:
Article
Tissue- and development-stage–specific mRNA and heterogeneous CNV signatures of human ribosomal proteins in normal and cancer samples.
Published in:
Nucleic Acids Research, 2020, v. 48, n. 13, p. 7079, doi. 10.1093/nar/gkaa485
By:
- Panda, Anshuman;
- Yadav, Anupama;
- Yeerna, Huwate;
- Singh, Amartya;
- Biehl, Michael;
- Lux, Markus;
- Schulz, Alexander;
- Klecha, Tyler;
- Doniach, Sebastian;
- Khiabanian, Hossein;
- Ganesan, Shridar;
- Tamayo, Pablo;
- Bhanot, Gyan
Publication type:
Article
IRF5 is a novel regulator of CXCL13 expression in breast cancer that regulates CXCR5<sup>+</sup> B- and T-cell trafficking to tumor-conditioned media.
Published in:
Immunology & Cell Biology, 2015, v. 93, n. 5, p. 486, doi. 10.1038/icb.2014.110
By:
- Pimenta, Erica Maria;
- De, Saurav;
- Weiss, Ryan;
- Feng, Di;
- Hall, Kelly;
- Kilic, Sarah;
- Bhanot, Gyan;
- Ganesan, Shridar;
- Ran, Sophia;
- Barnes, Betsy J
Publication type:
Article
On Statistical Modeling of Sequencing Noise in High Depth Data to Assess Tumor Evolution.
Published in:
Journal of Statistical Physics, 2018, v. 172, n. 1, p. 143, doi. 10.1007/s10955-017-1945-1
By:
- Rabadan, Raul;
- Bhanot, Gyan;
- Marsilio, Sonia;
- Chiorazzi, Nicholas;
- Pasqualucci, Laura;
- Khiabanian, Hossein
Publication type:
Article
Expression of an estrogen-regulated variant transcript of the peroxisomal branched chain fatty acid oxidase ACOX2 in breast carcinomas.
Published in:
BMC Cancer, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12885-015-1510-8
By:
- Bjørklund, Sunniva Stordal;
- Kristensen, Vessela N.;
- Seiler, Michael;
- Kumar, Surendra;
- Grenaker Alnæs, Grethe I.;
- Yao Ming;
- Kerrigan, John;
- Naume, Bjørn;
- Sachidanandam, Ravi;
- Bhanot, Gyan;
- Børresen-Dale, Anne-Lise;
- Ganesan, Shridar
Publication type:
Article
Expression of an estrogen-regulated variant transcript of the peroxisomal branched chain fatty acid oxidase ACOX2 in breast carcinomas
Published in:
BMC Cancer, 2015, v. 15, n. 1, p. 524, doi. 10.1186/s12885-015-1510-8
By:
- Bjørklund, Sunniva Stordal;
- Kristensen, Vessela N.;
- Seiler, Michael;
- Kumar, Surendra;
- Grenaker Alnæs, Grethe I.;
- Yao Ming;
- Kerrigan, John;
- Naume, Bjørn;
- Sachidanandam, Ravi;
- Bhanot, Gyan;
- Børresen-Dale, Anne-Lise;
- Ganesan, Shridar
Publication type:
Article
Expression of an estrogen-regulated variant transcript of the peroxisomal branched chain fatty acid oxidase ACOX2 in breast carcinomas
Published in:
BMC Cancer, 2015, v. 15, n. 1, p. 524, doi. 10.1186/s12885-015-1510-8
By:
- Bjørklund, Sunniva Stordal;
- Kristensen, Vessela N.;
- Seiler, Michael;
- Kumar, Surendra;
- Grenaker Alnæs, Grethe I.;
- Yao Ming;
- Kerrigan, John;
- Naume, Bjørn;
- Sachidanandam, Ravi;
- Bhanot, Gyan;
- Børresen-Dale, Anne-Lise;
- Ganesan, Shridar
Publication type:
Article
Expression of an estrogen-regulated variant transcript of the peroxisomal branched chain fatty acid oxidase ACOX2 in breast carcinomas
Published in:
BMC Cancer, 2015, v. 15, n. 1, p. 524, doi. 10.1186/s12885-015-1510-8
By:
- Bjørklund, Sunniva Stordal;
- Kristensen, Vessela N.;
- Seiler, Michael;
- Kumar, Surendra;
- Grenaker Alnæs, Grethe I.;
- Yao Ming;
- Kerrigan, John;
- Naume, Bjørn;
- Sachidanandam, Ravi;
- Bhanot, Gyan;
- Børresen-Dale, Anne-Lise;
- Ganesan, Shridar
Publication type:
Article
Expression of an estrogen-regulated variant transcript of the peroxisomal branched chain fatty acid oxidase ACOX2 in breast carcinomas.
Published in:
2015
By:
- Bjørklund, Sunniva Stordal;
- Kristensen, Vessela N;
- Seiler, Michael;
- Kumar, Surendra;
- Alnæs, Grethe I Grenaker;
- Ming, Yao;
- Kerrigan, John;
- Naume, Bjørn;
- Sachidanandam, Ravi;
- Bhanot, Gyan;
- Børresen-Dale, Anne-Lise;
- Ganesan, Shridar
Publication type:
journal article
Predicting protein phosphorylation from gene expression: top methods from the IMPROVER Species Translation Challenge.
Published in:
Bioinformatics, 2015, v. 31, n. 4, p. 462, doi. 10.1093/bioinformatics/btu490
By:
- Dayarian, Adel;
- Romero, Roberto;
- Wang, Zhiming;
- Biehl, Michael;
- Bilal, Erhan;
- Hormoz, Sahand;
- Meyer, Pablo;
- Norel, Raquel;
- Rhrissorrakrai, Kahn;
- Bhanot, Gyan;
- Luo, Feng;
- Tarca, Adi L.
Publication type:
Article
Inter-species inference of gene set enrichment in lung epithelial cells from proteomic and large transcriptomic datasets.
Published in:
Bioinformatics, 2015, v. 31, n. 4, p. 492, doi. 10.1093/bioinformatics/btu569
By:
- Hormoz, Sahand;
- Bhanot, Gyan;
- Biehl, Michael;
- Bilal, Erhan;
- Meyer, Pablo;
- Norel, Raquel;
- Rhrissorrakrai, Kahn;
- Dayarian, Adel
Publication type:
Article
Inter-species prediction of protein phosphorylation in the sbv IMPROVER species translation challenge.
Published in:
Bioinformatics, 2015, v. 31, n. 4, p. 453, doi. 10.1093/bioinformatics/btu407
By:
- Biehl, Michael;
- Sadowski, Peter;
- Bhanot, Gyan;
- Bilal, Erhan;
- Dayarian, Adel;
- Meyer, Pablo;
- Norel, Raquel;
- Rhrissorrakrai, Kahn;
- Zeller, Michael D.;
- Hormoz, Sahand
Publication type:
Article
3-D SPIN GLASSES AND ISING MODELS NEW METHODS ON NEW ARCHITECTURES.
Published in:
International Journal of Modern Physics C: Computational Physics & Physical Computation, 1993, v. 4, n. 1, p. 217, doi. 10.1142/S0129183193000239
By:
- BHANOT, GYAN
Publication type:
Article
WEIGHT RATIO FIXING AT FIRST ORDER PHASE TRANSITIONS.
Published in:
International Journal of Modern Physics C: Computational Physics & Physical Computation, 1992, v. 3, n. 5, p. 1109, doi. 10.1142/S0129183192000737
By:
- LIPPERT, THOMAS;
- SCHILLING, KLAUS;
- UEBERHOLZ, PEER;
- BHANOT, GYAN
Publication type:
Article
PHYSICS GOALS OF THE QCD TERAFLOP PROJECT.
Published in:
International Journal of Modern Physics C: Computational Physics & Physical Computation, 1991, v. 2, n. 4, p. 829, doi. 10.1142/S0129183191001049
By:
- AOKI, SINYA;
- SHROCK, ROBERT;
- BERG, BERND;
- BERNARD, CLAUDE;
- OGILVIE, MICHAEL;
- PETCHER, DON;
- BHANOT, GYAN;
- ROSSI, PIETRO;
- BITAR, KHALIL;
- EDWARDS, ROBERT;
- HELLER, URS M.;
- KENNEDY, ANTHONY;
- SANIELEVICI, SERGIO;
- BROWER, RICHARD;
- POTVIN, JEAN;
- REBBI, CLAUDIO;
- BROWN, FRANK R.;
- CHRIST, NORMAN;
- MAWHINNEY, ROBERT;
- DETAR, CARLETON
Publication type:
Article
Using postal change-of-address data to predict second waves in infections near pandemic epicentres.
Published in:
Epidemiology & Infection, 2022, v. 150, p. 1, doi. 10.1017/S0950268822000486
By:
- Schulman, Adam;
- Bhanot, Gyan
Publication type:
Article
Neurite Sprouting and Synapse Deterioration in the Aging Caenorhabditis elegans Nervous System.
Published in:
Journal of Neuroscience, 2012, v. 32, n. 26, p. 8778, doi. 10.1523/JNEUROSCI.1494-11.2012
By:
- Toth, Marton Lorant;
- Melentijevic, Ilija;
- Shah, Leena;
- Bhatia, Aatish;
- Lu, Kevin;
- Talwar, Amish;
- Naji, Haaris;
- Ibanez-Ventoso, Carolina;
- Ghose, Piya;
- Jevince, Angela;
- Jian Xue;
- Herndon, Laura A.;
- Bhanot, Gyan;
- Rongo, Chris;
- Hall, David H.;
- Driscoll, Monica
Publication type:
Article
Robust multi-tissue gene panel for cancerdetection.
Published in:
BMC Cancer, 2010, v. 10, p. 319, doi. 10.1186/1471-2407-10-319
By:
- Irgon, Joseph;
- Huang, C. Chris;
- Yi Zhang;
- Talantov, Dmitri;
- Bhanot, Gyan;
- Szalma, Sándor
Publication type:
Article

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