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Assessing DNA for fish identifications from reference collections: the good, bad and ugly shed light on formalin fixation and sequencing approaches.
Published in:
Journal of Fish Biology, 2021, v. 98, n. 5, p. 1421, doi. 10.1111/jfb.14687
By:
- Appleyard, Sharon A.;
- Maher, Safia;
- Pogonoski, John J.;
- Bent, Stephen J.;
- Chua, Xin‐Yi;
- McGrath, Annette
Publication type:
Article
Monitoring human babesiosis emergence through vector surveillance New England, USA.
Published in:
2014
By:
- Diuk-Wasser, Maria A;
- Liu, Yuchen;
- Steeves, Tanner K;
- Folsom-O'Keefe, Corrine;
- Dardick, Kenneth R;
- Lepore, Timothy;
- Bent, Stephen J;
- Usmani-Brown, Sahar;
- Telford 3rd, Sam R;
- Fish, Durland;
- Krause, Peter J;
- Telford, Sam R 3rd
Publication type:
journal article
Monitoring Human Babesiosis Emergence through Vector Surveillance, New England, USA.
Published in:
Emerging Infectious Diseases, 2014, v. 20, n. 2, p. 225, doi. 10.3201/eid1302/130644
By:
- Diuk-Wasser, Maria A.;
- Yuchen Liu;
- Steeves, Tanner K.;
- Folsom-O'Keefe, Corrine;
- Dardick, Kenneth R.;
- Lepore, Timothy;
- Bent, Stephen J.;
- Usmani-Brown, Sahar;
- Telford III, Sam R.;
- Fish, Durland;
- Krause, Peter J.
Publication type:
Article
A recurrent de novo mutation in TMEM106B causes hypomyelinating leukodystrophy.
Published in:
2017
By:
- Simons, Cas;
- Dyment, David;
- Bent, Stephen J.;
- Crawford, Joanna;
- D'Hooghe, Marc;
- Kohlschütter, Alfried;
- Venkateswaran, Sunita;
- Helman, Guy;
- Poll-The, Bwee-Tien;
- Makowski, Christine C.;
- Yoko Ito;
- Kernohan, Kristin;
- Hartley, Taila;
- Waisfisz, Quinten;
- Taft, Ryan J.;
- van der Knaap, Marjo S.;
- Wolf, Nicole I.;
- Ito, Yoko;
- Care4Rare Consortium
Publication type:
journal article
Integrative transcriptome meta-analysis reveals widespread sex-biased gene expression at the human fetal–maternal interface.
Published in:
Molecular Human Reproduction, 2014, v. 20, n. 8, p. 810, doi. 10.1093/molehr/gau035
By:
- Buckberry, Sam;
- Bianco-Miotto, Tina;
- Bent, Stephen J.;
- Dekker, Gustaaf A.;
- Roberts, Claire T.
Publication type:
Article
One Health approach to identify research needs in bovine and human babesioses: workshop report.
Published in:
Parasites & Vectors, 2010, v. 3, n. 1, p. 36, doi. 10.1186/1756-3305-3-36
By:
- León, Adalberto A. Pérez de;
- Strickman, Daniel A.;
- Knowles, Donald P.;
- Fish, Durland;
- Thacker, Eileen;
- laFuente, José de;
- Krause, Peter J.;
- Wikel, Stephen K.;
- Miller, Ryan S.;
- Wagner, Gale G.;
- Almazán, Consuelo;
- Hillman, Robert;
- Messenger, Matthew T.;
- Ugstad, Paul O.;
- Duhaime, Roberta A.;
- Teel, Pete D.;
- Ortega-Santos, Alfonso;
- Hewitt, David G.;
- Bowers, Edwin J.;
- Bent, Stephen J
Publication type:
Article
Bacterial succession in a glacier foreland of the High Arctic.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 11, p. 1258, doi. 10.1038/ismej.2009.71
By:
- Schütte, Ursel M E;
- Abdo, Zaid;
- Bent, Stephen J.;
- Williams, Christopher J.;
- Schneider, G. Maria;
- Solheim, Bjørn;
- Forney, Larry J.
Publication type:
Article
The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2008, v. 2, n. 7, p. 689, doi. 10.1038/ismej.2008.44
By:
- Bent, Stephen J.;
- Forney, Larry J.
Publication type:
Article
Inducible and Reversible Lentiviral and Recombination Mediated Cassette Exchange (RMCE) Systems for Controlling Gene Expression.
Published in:
PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0116373
By:
- Bersten, David C.;
- Sullivan, Adrienne E.;
- Li, Dian;
- Bhakti, Veronica;
- Bent, Stephen J.;
- Whitelaw, Murray L.
Publication type:
Article
Closely-related Borrelia burgdorferi (sensu stricto) strains exhibit similar fitness in single infections and asymmetric competition in multiple infections.
Published in:
Parasites & Vectors, 2017, v. 10, p. 1, doi. 10.1186/s13071-016-1964-9
By:
- Rynkiewicz, Evelyn C.;
- Brown, Julia;
- Tufts, Danielle M.;
- Ching-I Huang;
- Helge Kampen;
- Bent, Stephen J.;
- Durland Fish;
- Diuk-Wasser, Maria A.
Publication type:
Article
Placental transcriptome co-expression analysis reveals conserved regulatory programs across gestation.
Published in:
BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-016-3384-9
By:
- Buckberry, Sam;
- Bianco-Miotto, Tina;
- Bent, Stephen J.;
- Clifton, Vicki;
- Shoubridge, Cheryl;
- Shankar, Kartik;
- Roberts, Claire T.
Publication type:
Article
Author Correction: Pathogenic copy number variants that affect gene expression contribute to genomic burden in cerebral palsy.
Published in:
2019
By:
- Corbett, Mark A.;
- van Eyk, Clare L.;
- Webber, Dani L.;
- Bent, Stephen J.;
- Newman, Morgan;
- Harper, Kelly;
- Berry, Jesia G.;
- Azmanov, Dimitar N.;
- Woodward, Karen J.;
- Gardner, Alison E.;
- Slee, Jennie;
- Pérez-Jurado, Luís A.;
- MacLennan, Alastair H.;
- Gecz, Jozef
Publication type:
Correction Notice
Author Correction: Pathogenic copy number variants that affect gene expression contribute to genomic burden in cerebral palsy.
Published in:
2019
By:
- Corbett, Mark A.;
- van Eyk, Clare L.;
- Webber, Dani L.;
- Bent, Stephen J.;
- Newman, Morgan;
- Harper, Kelly;
- Berry, Jesia G.;
- Azmanov, Dimitar N.;
- Woodward, Karen J.;
- Gardner, Alison E.;
- Slee, Jennie;
- Pérez-Jurado, Luís A.;
- MacLennan, Alastair H.;
- Gecz, Jozef
Publication type:
Correction Notice
Pathogenic copy number variants that affect gene expression contribute to genomic burden in cerebral palsy.
Published in:
NPJ Genomic Medicine, 2018, v. 3, n. 1, p. N.PAG, doi. 10.1038/s41525-018-0073-4
By:
- Corbett, Mark A.;
- van Eyk, Clare L.;
- Webber, Dani L.;
- Bent, Stephen J.;
- Newman, Morgan;
- Harper, Kelly;
- Berry, Jesia G.;
- Azmanov, Dimitar N.;
- Woodward, Karen J.;
- Gardner, Alison E.;
- Slee, Jennie;
- Pérez-Jurado, Luís A.;
- MacLennan, Alastair H.;
- Gecz, Jozef
Publication type:
Article
MiCA: A Web-Based Tool for the Analysis of Microbial Communities Based on Terminal-Restriction Fragment Length Polymorphisms of 16S and 18S rRNA Genes.
Published in:
Microbial Ecology, 2007, v. 53, n. 4, p. 562, doi. 10.1007/s00248-006-9106-0
By:
- Shyu, Conrad;
- Soule, Terry;
- Bent, Stephen J.;
- Foster, James A.;
- Forney, Larry J.
Publication type:
Article
Evolutionary Relationships and Range Evolution of Greenhood Orchids (Subtribe Pterostylidinae): Insights From Plastid Phylogenomics.
Published in:
Frontiers in Plant Science, 2022, p. 1, doi. 10.3389/fpls.2022.912089
By:
- Nargar, Katharina;
- O'Hara, Kate;
- Mertin, Allison;
- Bent, Stephen J.;
- Nauheimer, Lars;
- Simpson, Lalita;
- Zimmer, Heidi;
- Molloy, Brian P. J.;
- Clements, Mark A.
Publication type:
Article
A genetic screen reveals a periplasmic copper chaperone required for nitrite reductase activity in pathogenic Neisseria.
Published in:
FASEB Journal, 2015, v. 29, n. 9, p. 3828, doi. 10.1096/fj.15-270751
By:
- Jen, Freda E.-C.;
- Djoko, Karrera Y.;
- Bent, Stephen J.;
- Day, Christopher J.;
- McEwan, Alastair G.;
- Jennings, Michael P.
Publication type:
Article
Genome sequencing in persistently unsolved white matter disorders.
Published in:
Annals of Clinical & Translational Neurology, 2020, v. 7, n. 1, p. 144, doi. 10.1002/acn3.50957
By:
- Helman, Guy;
- Lajoie, Bryan R.;
- Crawford, Joanna;
- Takanohashi, Asako;
- Walkiewicz, Marzena;
- Dolzhenko, Egor;
- Gross, Andrew M.;
- Gainullin, Vladimir G.;
- Bent, Stephen J.;
- Jenkinson, Emma M.;
- Ferdinandusse, Sacha;
- Waterham, Hans R.;
- Dorboz, Imen;
- Bertini, Enrico;
- Miyake, Noriko;
- Wolf, Nicole I.;
- Abbink, Truus E. M.;
- Kirwin, Susan M.;
- Tan, Christina M.;
- Hobson, Grace M.
Publication type:
Article
Statistical methods for characterizing diversity of microbial communities by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes.
Published in:
Environmental Microbiology, 2006, v. 8, n. 5, p. 929, doi. 10.1111/j.1462-2920.2005.00959.x
By:
- Abdo, Zaid;
- Schüette, Ursel M. E.;
- Bent, Stephen J.;
- Williams, Christopher J.;
- Forney, Larry J.;
- Joyce, Paul
Publication type:
Article
Plastid phylogenomics reveals evolutionary relationships in the mycoheterotrophic orchid genus Dipodium and provides insights into plastid gene degeneration.
Published in:
Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1388537
By:
- Goedderz, Stephanie;
- Clements, Mark A.;
- Bent, Stephen J.;
- Nicholls, James A.;
- Patel, Vidushi S.;
- Crayn, Darren M.;
- Schlüter, Philipp M.;
- Nargar, Katharina
Publication type:
Article
Whole genome capture of vector-borne pathogens from mixed DNA samples: a case study of Borrelia burgdorferi.
Published in:
BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1634-x
By:
- Carpi, Giovanna;
- Walter, Katharine S.;
- Bent, Stephen J.;
- Gatewood Hoen, Anne;
- Diuk-Wasser, Maria;
- Caccone, Adalgisa
Publication type:
Article
massiR: a method for predicting the sex of samples in gene expression microarray datasets.
Published in:
Bioinformatics, 2014, v. 30, n. 14, p. 2084, doi. 10.1093/bioinformatics/btu161
By:
- Buckberry, Sam;
- Bent, Stephen J.;
- Bianco-Miotto, Tina;
- Roberts, Claire T.
Publication type:
Article
Parathyroid hormone-related peptide and Indian hedgehog expression patterns in naturally acquired equine osteochondrosis
Published in:
Journal of Orthopaedic Research, 2002, v. 20, n. 6, p. 1290, doi. 10.1016/S0736-0266(02)00055-4
By:
- Semevolos, Stacy A.;
- Brower-Toland, Brent D.;
- Bent, Stephen J.;
- Nixon, Alan J.
Publication type:
Article
Gene mediated insulin-like growth factor-I delivery to the synovium.
Published in:
Journal of Orthopaedic Research, 2001, v. 19, n. 5, p. 759, doi. 10.1016/S0736-0266(00)00077-2
By:
- Saxer, Rachel A.;
- Bent, Stephen J.;
- Brower-Toland, Brent D.;
- Mi, Zhibao;
- Robbins, Paul D.;
- Evans, Christopher H.;
- Nixon, Alan J.
Publication type:
Article
Chondrocytic differentiation of mesenchymal stem cells sequentially exposed to transforming growth factor-β1 in monolayer and insulin-like growth factor-I in a three-dimensional matrix.
Published in:
Journal of Orthopaedic Research, 2001, v. 19, n. 4, p. 738, doi. 10.1016/S0736-0266(00)00054-1
By:
- Worster, Allison A.;
- Brower-Toland, Brent D.;
- Fortier, Lisa A.;
- Bent, Stephen J.;
- Williams, Janice;
- Nixon, Alan J.
Publication type:
Article
There is a specific response to pH by isolates of Haemophilus influenzae and this has a direct influence on biofilm formation.
Published in:
BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-47
By:
- Ishak, Nadiah;
- Tikhomirova, Alexandra;
- Bent, Stephen J.;
- Ehrlich, Garth D.;
- Hu, Fen Z.;
- Kidd, Stephen P.
Publication type:
Article

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